RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 SEPT7Q16181 437 aaKnown RBP7.57□□□□□ -1.2
CHD6-203ENST00000373233 TSHZ3Q63HK5 1081 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 NOL7Q9UMY1 257 aaKnown RBP7.57□□□□□ -1.2
CHD6-203ENST00000373233 RGPD5Q99666 1765 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 KIF1CO43896 1103 aaKnown RBP7.57□□□□□ -1.2
CHD6-203ENST00000373233 CCDC50Q8IVM0 306 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 ACSBG1Q96GR2 724 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 MPHOSPH8Q99549 860 aa7.57□□□□□ -1.2
CHD6-203ENST00000373233 SPATA31A3Q5VYP0 1347 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 FILIP1LQ4L180 1135 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 SMC5Q8IY18 1101 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 CDCA7Q9BWT1 371 aaPredicted RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 G3V3G9 751 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 WASHC4Q2M389 1173 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 DCAF8Q5TAQ9 597 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 DDX27Q96GQ7 796 aaKnown RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 TRMT1Q9NXH9 659 aaKnown RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 GRM8O00222 908 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 ZFYP08048 801 aaPredicted RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 NEK4P51957 841 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 DNAJC21Q5F1R6 531 aaKnown RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 CCDC158Q5M9N0 1113 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 FBF1Q8TES7 1133 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 JARID2Q92833 1246 aaPredicted RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 ZNF396Q96N95 335 aaPredicted RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 TBC1D32Q96NH3 1257 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 UPF3BQ9BZI7 483 aaKnown RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 IRAK4Q9NWZ3 460 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 AFDNP55196 1824 aaKnown RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 TCHHQ07283 1943 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 NUCKS1Q9H1E3 243 aaKnown RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 FAM114A2Q9NRY5 505 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 ERBB3P21860 1342 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 URI1O94763 535 aaPredicted RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 DDB1Q16531 1140 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 MRFAP1L1Q96HT8 127 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 ZBTB7BO15156 539 aaPredicted RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 MCM6Q14566 821 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 NAP1L3Q99457 506 aaPredicted RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 GNL3LQ9NVN8 582 aaKnown RBP7.56□□□□□ -1.2
CHD6-203ENST00000373233 PHKG2P15735 406 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 OTUD6BQ8N6M0 293 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 TBC1D2BQ9UPU7 963 aa7.56□□□□□ -1.2
CHD6-203ENST00000373233 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHD6-203ENST00000373233 KCNQ3O43525 872 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 U2AF2P26368 475 aaKnown RBP eCLIP7.55□□□□□ -1.22e-6■■□□□ 13.3
CHD6-203ENST00000373233 PSMA5P28066 241 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 SSFA2P28290 1259 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 TRIM29Q14134 588 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 C8orf34Q49A92 452 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 INPP5BP32019 993 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 PEX19P40855 299 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 ICE2Q659A1 982 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 LINS1Q8NG48 757 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 BRMS1Q9HCU9 246 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 CEP126Q9P2H0 1117 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 GLRX3O76003 335 aaKnown RBP7.55□□□□□ -1.2
CHD6-203ENST00000373233 CCDC172P0C7W6 258 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 MAATS1Q7Z4T9 603 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 ERVV-2B6SEH9 535 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 EPB41L2O43491 1005 aaKnown RBP7.55□□□□□ -1.2
CHD6-203ENST00000373233 ZPR1O75312 459 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 GPTP24298 496 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 SH2D4BQ5SQS7 431 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 IFIT5Q13325 482 aaKnown RBP7.55□□□□□ -1.2
CHD6-203ENST00000373233 BICDL1Q6ZP65 573 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 BRPF1P55201 1214 aaPredicted RBP7.55□□□□□ -1.2
CHD6-203ENST00000373233 IFFO1Q0D2I5 559 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 CARD10Q9BWT7 1032 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 MKRN1Q9UHC7 482 aaKnown RBP7.55□□□□□ -1.2
CHD6-203ENST00000373233 TPX2Q9ULW0 747 aaKnown RBP7.55□□□□□ -1.2
CHD6-203ENST00000373233 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.55□□□□□ -1.21e-6■■■□□ 16.4
CHD6-203ENST00000373233 DDX21Q9NR30 783 aaKnown RBP eCLIP7.55□□□□□ -1.2
CHD6-203ENST00000373233 CWC27Q6UX04 472 aaKnown RBP7.55□□□□□ -1.2
CHD6-203ENST00000373233 RAI14Q9P0K7 980 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 WDR17Q8IZU2 1322 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 METTL24Q5JXM2 366 aa7.55□□□□□ -1.2
CHD6-203ENST00000373233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.55□□□□□ -1.23e-7■■□□□ 14.4
CHD6-203ENST00000373233 TRMT112Q9UI30 125 aaKnown RBP7.55□□□□□ -1.2
CHD6-203ENST00000373233 GSDMDP57764 484 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 CAMK4Q16566 473 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 CWF19L2Q2TBE0 894 aaKnown RBP7.54□□□□□ -1.2
CHD6-203ENST00000373233 ZBTB9Q96C00 473 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 EIF5P55010 431 aaKnown RBP7.54□□□□□ -1.2
CHD6-203ENST00000373233 LMNTD2Q8IXW0 634 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 ZNF830Q96NB3 372 aaPredicted RBP7.54□□□□□ -1.2
CHD6-203ENST00000373233 DCTPP1Q9H773 170 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 NCOA3Q9Y6Q9 1424 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 CFAP57Q96MR6 1250 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 IGHMBP2P38935 993 aaKnown RBP7.54□□□□□ -1.2
CHD6-203ENST00000373233 KRT85P78386 507 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 CCDC6Q16204 474 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 TSNAXIP1Q2TAA8 658 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 NSRP1Q9H0G5 558 aaKnown RBP7.54□□□□□ -1.2
CHD6-203ENST00000373233 B4GALNT4Q76KP1 1039 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 FRMD3A2A2Y4 597 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 SLU7O95391 586 aaKnown RBP7.54□□□□□ -1.2
CHD6-203ENST00000373233 GOPCQ9HD26 462 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 MRFAP1Q9Y605 127 aa7.54□□□□□ -1.2
CHD6-203ENST00000373233 LOC102724159A0A0B4J2E5 919 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms