RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 TAF6LQ9Y6J9 622 aa21.31■■□□□ 1
CD40-201ENST00000372276 E7EWF7 191 aa21.3■■□□□ 1
CD40-201ENST00000372276 EXOC5O00471 708 aa21.3■■□□□ 1
CD40-201ENST00000372276 CAVIN2O95810 425 aa21.3■■□□□ 1
CD40-201ENST00000372276 TPM3P06753 285 aa21.3■■□□□ 1
CD40-201ENST00000372276 EVCP57679 992 aa21.3■■□□□ 1
CD40-201ENST00000372276 IMMTQ16891 758 aaKnown RBP21.3■■□□□ 1
CD40-201ENST00000372276 APPBP2Q92624 585 aa21.3■■□□□ 1
CD40-201ENST00000372276 FUCA2Q9BTY2 467 aa21.3■■□□□ 1
CD40-201ENST00000372276 NDUFB9Q9Y6M9 179 aa21.3■■□□□ 1
CD40-201ENST00000372276 ANKRD36CQ5JPF3 1778 aa21.3■■□□□ 1
CD40-201ENST00000372276 DHX16O60231 1041 aaKnown RBP21.29■■□□□ 1
CD40-201ENST00000372276 OFD1O75665 1012 aa21.29■■□□□ 1
CD40-201ENST00000372276 IL6STP40189 918 aaPredicted RBP21.29■■□□□ 1
CD40-201ENST00000372276 STK3Q13188 491 aa21.29■■□□□ 1
CD40-201ENST00000372276 TTC6Q86TZ1 520 aa21.29■■□□□ 1
CD40-201ENST00000372276 NLRP10Q86W26 655 aa21.29■■□□□ 1
CD40-201ENST00000372276 NAP1L5Q96NT1 182 aaPredicted RBP21.29■■□□□ 1
CD40-201ENST00000372276 PUS3Q9BZE2 481 aaKnown RBP21.29■■□□□ 1
CD40-201ENST00000372276 LAMA4Q16363 1823 aa21.29■■□□□ 1
CD40-201ENST00000372276 NUTM2BA6NNL0 878 aaPredicted RBP21.29■■□□□ 1
CD40-201ENST00000372276 NUTM2EB1AL46 878 aaPredicted RBP21.29■■□□□ 1
CD40-201ENST00000372276 PTMAP06454 111 aaKnown RBP21.29■■□□□ 1
CD40-201ENST00000372276 CYP19A1P11511 503 aaPredicted RBP21.29■■□□□ 1
CD40-201ENST00000372276 MAP3K11Q16584 847 aa21.29■■□□□ 1
CD40-201ENST00000372276 ATP2B3Q16720 1220 aa21.29■■□□□ 1
CD40-201ENST00000372276 NUTM2AQ8IVF1 878 aaPredicted RBP21.29■■□□□ 1
CD40-201ENST00000372276 NUP62CLQ9H1M0 184 aa21.29■■□□□ 1
CD40-201ENST00000372276 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
CD40-201ENST00000372276 RESTQ13127 1097 aa21.28■■□□□ 1
CD40-201ENST00000372276 STOX1Q6ZVD7 989 aa21.28■■□□□ 1
CD40-201ENST00000372276 LEO1Q8WVC0 666 aaPredicted RBP21.28■■□□□ 1
CD40-201ENST00000372276 FAM89AQ96GI7 184 aa21.28■■□□□ 1
CD40-201ENST00000372276 ZNF396Q96N95 335 aaPredicted RBP21.28■■□□□ 1
CD40-201ENST00000372276 RIPOR2Q9Y4F9 1068 aa21.28■■□□□ 1
CD40-201ENST00000372276 MYH3P11055 1940 aa21.28■■□□□ 1
CD40-201ENST00000372276 PDE8AO60658 829 aa21.27■■□□□ 1
CD40-201ENST00000372276 TPM2P07951 284 aa21.27■■□□□ 1
CD40-201ENST00000372276 UQCRFS1P1P0C7P4 283 aa21.27■■□□□ 1
CD40-201ENST00000372276 CTSWP56202 376 aa21.27■■□□□ 1
CD40-201ENST00000372276 SCRN1Q12765 414 aa21.27■■□□□ 1
CD40-201ENST00000372276 METTL24Q5JXM2 366 aa21.27■■□□□ 1
CD40-201ENST00000372276 LDHAL6AQ6ZMR3 332 aa21.27■■□□□ 1
CD40-201ENST00000372276 ZNF330Q9Y3S2 320 aaPredicted RBP21.27■■□□□ 1
CD40-201ENST00000372276 KDM4AO75164 1064 aa21.26■□□□□ 0.99
CD40-201ENST00000372276 TTLL11Q8NHH1 800 aa21.26■□□□□ 0.99
CD40-201ENST00000372276 WASHC4Q2M389 1173 aa21.26■□□□□ 0.99
CD40-201ENST00000372276 FERMT3Q86UX7 667 aa21.26■□□□□ 0.99
CD40-201ENST00000372276 NSUN7Q8NE18 718 aaKnown RBP21.26■□□□□ 0.99
CD40-201ENST00000372276 CCDC9Q9Y3X0 531 aaKnown RBP21.26■□□□□ 0.99
CD40-201ENST00000372276 MYH7P12883 1935 aa21.25■□□□□ 0.99
CD40-201ENST00000372276 ITGA6P23229 1130 aa21.25■□□□□ 0.99
CD40-201ENST00000372276 OSBP2Q969R2 916 aa21.25■□□□□ 0.99
CD40-201ENST00000372276 THRAP3Q9Y2W1 955 aaKnown RBP21.25■□□□□ 0.99
CD40-201ENST00000372276 M0R2C6 588 aa21.24■□□□□ 0.99
CD40-201ENST00000372276 IRS4O14654 1257 aaPredicted RBP21.24■□□□□ 0.99
CD40-201ENST00000372276 CTAGE5O15320 804 aa21.24■□□□□ 0.99
CD40-201ENST00000372276 JAK2O60674 1132 aa21.24■□□□□ 0.99
CD40-201ENST00000372276 HCLS1P14317 486 aaPredicted RBP21.24■□□□□ 0.99
CD40-201ENST00000372276 RBM43Q6ZSC3 357 aaKnown RBP21.24■□□□□ 0.99
CD40-201ENST00000372276 CNNM1Q9NRU3 951 aa21.24■□□□□ 0.99
CD40-201ENST00000372276 MROH5Q6ZUA9 1318 aa21.24■□□□□ 0.99
CD40-201ENST00000372276 UBE3CQ15386 1083 aa21.23■□□□□ 0.99
CD40-201ENST00000372276 MEX3CQ5U5Q3 659 aaKnown RBP21.23■□□□□ 0.99
CD40-201ENST00000372276 GIMAP6Q6P9H5 292 aa21.23■□□□□ 0.99
CD40-201ENST00000372276 NCOA7Q8NI08 942 aa21.23■□□□□ 0.99
CD40-201ENST00000372276 FAM200AQ8TCP9 573 aa21.23■□□□□ 0.99
CD40-201ENST00000372276 TNMDQ9H2S6 317 aa21.23■□□□□ 0.99
CD40-201ENST00000372276 CLSTN2Q9H4D0 955 aa21.23■□□□□ 0.99
CD40-201ENST00000372276 USP25Q9UHP3 1055 aa21.23■□□□□ 0.99
CD40-201ENST00000372276 TRMT112Q9UI30 125 aaKnown RBP21.23■□□□□ 0.99
CD40-201ENST00000372276 PTPDC1A2A3K4 754 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 GOLGA6L6A8MZA4 724 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 PDIA3P30101 505 aaKnown RBP21.22■□□□□ 0.99
CD40-201ENST00000372276 COL9A3Q14050 684 aaPredicted RBP21.22■□□□□ 0.99
CD40-201ENST00000372276 RCOR1Q9UKL0 485 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 TBC1D2BQ9UPU7 963 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 ATRNO75882 1429 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 RIC1Q4ADV7 1423 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 PDE8BO95263 885 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 ADAMTS2O95450 1211 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 ADORA1P30542 326 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 APOBRQ0VD83 1088 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 KIAA2012Q0VF49 1180 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 RALYLQ86SE5 291 aaKnown RBP21.22■□□□□ 0.99
CD40-201ENST00000372276 SALL1Q9NSC2 1324 aa21.22■□□□□ 0.99
CD40-201ENST00000372276 NUP98P52948 1817 aa21.21■□□□□ 0.99
CD40-201ENST00000372276 ZNF213O14771 459 aa21.21■□□□□ 0.99
CD40-201ENST00000372276 ADCY5O95622 1261 aa21.21■□□□□ 0.99
CD40-201ENST00000372276 ZAP70P43403 619 aa21.21■□□□□ 0.99
CD40-201ENST00000372276 HLFQ16534 295 aa21.21■□□□□ 0.99
CD40-201ENST00000372276 ZNF34Q8IZ26 560 aa21.21■□□□□ 0.99
CD40-201ENST00000372276 WNK3Q9BYP7 1800 aa21.21■□□□□ 0.99
CD40-201ENST00000372276 CHGBP05060 677 aa21.2■□□□□ 0.98
CD40-201ENST00000372276 TRDNQ13061 729 aa21.2■□□□□ 0.98
CD40-201ENST00000372276 PARP10Q53GL7 1025 aa21.2■□□□□ 0.98
CD40-201ENST00000372276 DZIP3Q86Y13 1208 aaKnown RBP21.2■□□□□ 0.98
CD40-201ENST00000372276 BICD2Q8TD16 824 aa21.2■□□□□ 0.98
CD40-201ENST00000372276 LPIN2Q92539 896 aa21.2■□□□□ 0.98
CD40-201ENST00000372276 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms