RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 EYA2O00167 538 aa22.49■■□□□ 1.19
TMEM53-202ENST00000372237 CTDNEP1O95476 244 aa22.49■■□□□ 1.19
TMEM53-202ENST00000372237 AGXT2Q9BYV1 514 aa22.49■■□□□ 1.19
TMEM53-202ENST00000372237 ZNF594Q96JF6 807 aaPredicted RBP22.48■■□□□ 1.19
TMEM53-202ENST00000372237 MYH15Q9Y2K3 1946 aa22.48■■□□□ 1.19
TMEM53-202ENST00000372237 COL5A2P05997 1499 aaPredicted RBP22.48■■□□□ 1.19
TMEM53-202ENST00000372237 A0A1B0GUL7 405 aa22.48■■□□□ 1.19
TMEM53-202ENST00000372237 ADD1P35611 737 aaKnown RBP22.48■■□□□ 1.19
TMEM53-202ENST00000372237 CHAF1AQ13111 956 aaPredicted RBP22.48■■□□□ 1.19
TMEM53-202ENST00000372237 CCDC186Q7Z3E2 898 aa22.48■■□□□ 1.19
TMEM53-202ENST00000372237 ZBTB3Q9H5J0 574 aa22.48■■□□□ 1.19
TMEM53-202ENST00000372237 PARP4Q9UKK3 1724 aaKnown RBP22.48■■□□□ 1.19
TMEM53-202ENST00000372237 MAST3O60307 1309 aa22.47■■□□□ 1.19
TMEM53-202ENST00000372237 CAVIN2O95810 425 aa22.47■■□□□ 1.19
TMEM53-202ENST00000372237 ZNF75DP51815 510 aa22.47■■□□□ 1.19
TMEM53-202ENST00000372237 PLA2G4DQ86XP0 818 aa22.47■■□□□ 1.19
TMEM53-202ENST00000372237 CCDC191Q8NCU4 936 aa22.47■■□□□ 1.19
TMEM53-202ENST00000372237 A0A0G2JLW4 131 aa22.47■■□□□ 1.19
TMEM53-202ENST00000372237 RNF113AO15541 343 aaKnown RBP22.47■■□□□ 1.19
TMEM53-202ENST00000372237 A1BGP04217 495 aa22.47■■□□□ 1.19
TMEM53-202ENST00000372237 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.47■■□□□ 1.19
TMEM53-202ENST00000372237 NCOA5Q9HCD5 579 aaKnown RBP22.47■■□□□ 1.19
TMEM53-202ENST00000372237 NUP188Q5SRE5 1749 aa22.46■■□□□ 1.19
TMEM53-202ENST00000372237 FTOQ9C0B1 505 aaKnown RBP eCLIP22.46■■□□□ 1.19
TMEM53-202ENST00000372237 RCOR1Q9UKL0 485 aa22.46■■□□□ 1.19
TMEM53-202ENST00000372237 TJP1Q07157 1748 aa22.46■■□□□ 1.19
TMEM53-202ENST00000372237 CHST3Q7LGC8 479 aa22.46■■□□□ 1.19
TMEM53-202ENST00000372237 CCAR1Q8IX12 1150 aaKnown RBP22.46■■□□□ 1.19
TMEM53-202ENST00000372237 PCDH11XQ9BZA7 1347 aa22.45■■□□□ 1.18
TMEM53-202ENST00000372237 PCDH11YQ9BZA8 1340 aa22.45■■□□□ 1.18
TMEM53-202ENST00000372237 TSC1Q92574 1164 aa22.45■■□□□ 1.18
TMEM53-202ENST00000372237 ZNF396Q96N95 335 aaPredicted RBP22.45■■□□□ 1.18
TMEM53-202ENST00000372237 CTAGE5O15320 804 aa22.45■■□□□ 1.18
TMEM53-202ENST00000372237 PDIA3P30101 505 aaKnown RBP22.45■■□□□ 1.18
TMEM53-202ENST00000372237 ZCRB1Q8TBF4 217 aaKnown RBP22.45■■□□□ 1.18
TMEM53-202ENST00000372237 ZNF274Q96GC6 653 aaPredicted RBP22.45■■□□□ 1.18
TMEM53-202ENST00000372237 USP28Q96RU2 1077 aa22.45■■□□□ 1.18
TMEM53-202ENST00000372237 CARD10Q9BWT7 1032 aa22.45■■□□□ 1.18
TMEM53-202ENST00000372237 ATG3Q9NT62 314 aa22.45■■□□□ 1.18
TMEM53-202ENST00000372237 SALL1Q9NSC2 1324 aa22.44■■□□□ 1.18
TMEM53-202ENST00000372237 PPFIA3O75145 1194 aa22.44■■□□□ 1.18
TMEM53-202ENST00000372237 CIAO1O76071 339 aa22.44■■□□□ 1.18
TMEM53-202ENST00000372237 ARID3AQ99856 593 aa22.44■■□□□ 1.18
TMEM53-202ENST00000372237 NRBP1Q9UHY1 535 aa22.44■■□□□ 1.18
TMEM53-202ENST00000372237 GOLGA6L19H0YKK7 550 aa22.43■■□□□ 1.18
TMEM53-202ENST00000372237 ATL3Q6DD88 541 aa22.43■■□□□ 1.18
TMEM53-202ENST00000372237 CCDC73Q6ZRK6 1079 aa22.43■■□□□ 1.18
TMEM53-202ENST00000372237 PUS3Q9BZE2 481 aaKnown RBP22.43■■□□□ 1.18
TMEM53-202ENST00000372237 M0R2C6 588 aa22.43■■□□□ 1.18
TMEM53-202ENST00000372237 FKBP4Q02790 459 aaKnown RBP eCLIP22.43■■□□□ 1.18
TMEM53-202ENST00000372237 CHMP4CQ96CF2 233 aa22.43■■□□□ 1.18
TMEM53-202ENST00000372237 STRN4Q9NRL3 753 aa22.43■■□□□ 1.18
TMEM53-202ENST00000372237 CEP126Q9P2H0 1117 aa22.43■■□□□ 1.18
TMEM53-202ENST00000372237 CLIP2Q9UDT6 1046 aa22.43■■□□□ 1.18
TMEM53-202ENST00000372237 SPEF2Q9C093 1822 aa22.43■■□□□ 1.18
TMEM53-202ENST00000372237 NHSL1Q5SYE7 1610 aa22.43■■□□□ 1.18
TMEM53-202ENST00000372237 GUCY1B3Q02153 619 aa22.42■■□□□ 1.18
TMEM53-202ENST00000372237 LRMPQ12912 555 aa22.42■■□□□ 1.18
TMEM53-202ENST00000372237 TTLL5Q6EMB2 1281 aa22.42■■□□□ 1.18
TMEM53-202ENST00000372237 GOLPH3LQ9H4A5 285 aa22.42■■□□□ 1.18
TMEM53-202ENST00000372237 ERVV-2B6SEH9 535 aa22.42■■□□□ 1.18
TMEM53-202ENST00000372237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.42■■□□□ 1.18
TMEM53-202ENST00000372237 OSBP2Q969R2 916 aa22.42■■□□□ 1.18
TMEM53-202ENST00000372237 UBR2Q8IWV8 1755 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 KINO60870 393 aaKnown RBP22.41■■□□□ 1.18
TMEM53-202ENST00000372237 EVA1CP58658 441 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 STX1AQ16623 288 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 LRRFIP1Q32MZ4 808 aaKnown RBP22.41■■□□□ 1.18
TMEM53-202ENST00000372237 CCDC158Q5M9N0 1113 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 ZSCAN25Q6NSZ9 544 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 CARMIL3Q8ND23 1372 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 IL2RBP14784 551 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 ME1P48163 572 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 SNW1Q13573 536 aaKnown RBP22.41■■□□□ 1.18
TMEM53-202ENST00000372237 IQCB1Q15051 598 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 CCDC57Q2TAC2 916 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 GORABQ5T7V8 394 aa22.41■■□□□ 1.18
TMEM53-202ENST00000372237 TTC39AQ5SRH9 613 aa22.4■■□□□ 1.18
TMEM53-202ENST00000372237 C11orf57Q6ZUT1 292 aaPredicted RBP22.4■■□□□ 1.18
TMEM53-202ENST00000372237 FAM160A1Q05DH4 1040 aa22.4■■□□□ 1.18
TMEM53-202ENST00000372237 ZNF710Q8N1W2 664 aa22.4■■□□□ 1.18
TMEM53-202ENST00000372237 ABCA3Q99758 1704 aa22.39■■□□□ 1.18
TMEM53-202ENST00000372237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.39■■□□□ 1.17
TMEM53-202ENST00000372237 FAM177BA6PVY3 158 aa22.39■■□□□ 1.17
TMEM53-202ENST00000372237 RIOK3O14730 519 aaKnown RBP22.39■■□□□ 1.17
TMEM53-202ENST00000372237 WASHC4Q2M389 1173 aa22.39■■□□□ 1.17
TMEM53-202ENST00000372237 ZMYND15Q9H091 742 aa22.39■■□□□ 1.17
TMEM53-202ENST00000372237 CTNNA3Q9UI47 895 aa22.39■■□□□ 1.17
TMEM53-202ENST00000372237 KCPQ6ZWJ8 1503 aa22.39■■□□□ 1.17
TMEM53-202ENST00000372237 CDC25BP30305 580 aa22.39■■□□□ 1.17
TMEM53-202ENST00000372237 IMMTQ16891 758 aaKnown RBP22.38■■□□□ 1.17
TMEM53-202ENST00000372237 ILDR1Q86SU0 546 aaPredicted RBP22.38■■□□□ 1.17
TMEM53-202ENST00000372237 FBXL16Q8N461 479 aa22.38■■□□□ 1.17
TMEM53-202ENST00000372237 ENGASEQ8NFI3 743 aa22.38■■□□□ 1.17
TMEM53-202ENST00000372237 AKAP2Q9Y2D5 859 aa22.38■■□□□ 1.17
TMEM53-202ENST00000372237 BECN2A8MW95 431 aa22.37■■□□□ 1.17
TMEM53-202ENST00000372237 FDPSP14324 419 aaKnown RBP22.37■■□□□ 1.17
TMEM53-202ENST00000372237 HAND2P61296 217 aa22.37■■□□□ 1.17
TMEM53-202ENST00000372237 SARM1Q6SZW1 724 aa22.37■■□□□ 1.17
TMEM53-202ENST00000372237 FSIP1Q8NA03 581 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms