RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 RFX7Q2KHR2 1363 aa15.62■□□□□ 0.09
LDB3-203ENST00000372056 NMIQ13287 307 aaPredicted RBP15.61■□□□□ 0.09
LDB3-203ENST00000372056 HAUS7Q99871 368 aa15.61■□□□□ 0.09
LDB3-203ENST00000372056 SEC31BQ9NQW1 1179 aa15.61■□□□□ 0.09
LDB3-203ENST00000372056 MMP10P09238 476 aa15.61■□□□□ 0.09
LDB3-203ENST00000372056 DDR1Q08345 913 aa15.61■□□□□ 0.09
LDB3-203ENST00000372056 ILDR2Q71H61 639 aa15.61■□□□□ 0.09
LDB3-203ENST00000372056 FAM227BQ96M60 508 aa15.61■□□□□ 0.09
LDB3-203ENST00000372056 TMX4Q9H1E5 349 aaPredicted RBP15.61■□□□□ 0.09
LDB3-203ENST00000372056 FGFR2P21802 821 aa15.6■□□□□ 0.09
LDB3-203ENST00000372056 DEFB132Q7Z7B7 95 aa15.6■□□□□ 0.09
LDB3-203ENST00000372056 EDC3Q96F86 508 aaKnown RBP15.6■□□□□ 0.09
LDB3-203ENST00000372056 XAGE2Q96GT9 111 aa15.6■□□□□ 0.09
LDB3-203ENST00000372056 GNL3LQ9NVN8 582 aaKnown RBP15.6■□□□□ 0.09
LDB3-203ENST00000372056 SPEF2Q9C093 1822 aa15.6■□□□□ 0.09
LDB3-203ENST00000372056 EP400Q96L91 3159 aa15.6■□□□□ 0.09
LDB3-203ENST00000372056 A0A0D9SFI3 127 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 NPR1P16066 1061 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 MCM2P49736 904 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 TIMM10P62072 90 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 PTH1RQ03431 593 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 CHRNDQ07001 517 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 TTF1Q15361 905 aaPredicted RBP15.59■□□□□ 0.09
LDB3-203ENST00000372056 TTC39AQ5SRH9 613 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 ANO8Q9HCE9 1232 aaPredicted RBP15.59■□□□□ 0.09
LDB3-203ENST00000372056 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 MED23Q9ULK4 1368 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 CCDC171Q6TFL3 1326 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 TMED8Q6PL24 325 aaPredicted RBP15.59■□□□□ 0.09
LDB3-203ENST00000372056 MINPP1Q9UNW1 487 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 LEMD3Q9Y2U8 911 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 SNX14Q9Y5W7 946 aa15.59■□□□□ 0.09
LDB3-203ENST00000372056 GRIPAP1Q4V328 841 aa15.58■□□□□ 0.08
LDB3-203ENST00000372056 CAVIN4Q5BKX8 364 aa15.58■□□□□ 0.08
LDB3-203ENST00000372056 DNAJC2Q99543 621 aaKnown RBP15.58■□□□□ 0.08
LDB3-203ENST00000372056 RASEFQ8IZ41 740 aa15.57■□□□□ 0.08
LDB3-203ENST00000372056 KCNB2Q92953 911 aa15.57■□□□□ 0.08
LDB3-203ENST00000372056 UPF3BQ9BZI7 483 aaKnown RBP15.57■□□□□ 0.08
LDB3-203ENST00000372056 NDUFB9Q9Y6M9 179 aa15.57■□□□□ 0.08
LDB3-203ENST00000372056 CASZ1Q86V15 1759 aa15.57■□□□□ 0.08
LDB3-203ENST00000372056 SEMA3EO15041 775 aa15.57■□□□□ 0.08
LDB3-203ENST00000372056 RAB3GAP1Q15042 981 aa15.57■□□□□ 0.08
LDB3-203ENST00000372056 CELF1Q92879 486 aaKnown RBP15.57■□□□□ 0.08
LDB3-203ENST00000372056 MASTLQ96GX5 879 aa15.57■□□□□ 0.08
LDB3-203ENST00000372056 ZFYP08048 801 aaPredicted RBP15.56■□□□□ 0.08
LDB3-203ENST00000372056 KCNJ4P48050 445 aa15.56■□□□□ 0.08
LDB3-203ENST00000372056 STYK1Q6J9G0 422 aa15.56■□□□□ 0.08
LDB3-203ENST00000372056 ZSCAN25Q6NSZ9 544 aa15.56■□□□□ 0.08
LDB3-203ENST00000372056 C3orf67Q6ZVT6 689 aa15.56■□□□□ 0.08
LDB3-203ENST00000372056 KBTBD3Q8NAB2 608 aa15.56■□□□□ 0.08
LDB3-203ENST00000372056 MAP4K1Q92918 833 aa15.56■□□□□ 0.08
LDB3-203ENST00000372056 TMX3Q96JJ7 454 aa15.56■□□□□ 0.08
LDB3-203ENST00000372056 H0YIN7 160 aa15.55■□□□□ 0.08
LDB3-203ENST00000372056 ARID4AP29374 1257 aaPredicted RBP15.55■□□□□ 0.08
LDB3-203ENST00000372056 NECTIN1Q15223 517 aa15.55■□□□□ 0.08
LDB3-203ENST00000372056 C15orf52Q6ZUT6 534 aaKnown RBP15.55■□□□□ 0.08
LDB3-203ENST00000372056 PAG1Q9NWQ8 432 aa15.55■□□□□ 0.08
LDB3-203ENST00000372056 ARAP2Q8WZ64 1704 aa15.55■□□□□ 0.08
LDB3-203ENST00000372056 XDHP47989 1333 aa15.55■□□□□ 0.08
LDB3-203ENST00000372056 SRGNP10124 158 aa15.54■□□□□ 0.08
LDB3-203ENST00000372056 ATP2B4P23634 1241 aa15.54■□□□□ 0.08
LDB3-203ENST00000372056 ZNF589Q86UQ0 364 aaPredicted RBP15.54■□□□□ 0.08
LDB3-203ENST00000372056 SP8Q8IXZ3 490 aa15.54■□□□□ 0.08
LDB3-203ENST00000372056 UPF1Q92900 1129 aaKnown RBP eCLIP15.54■□□□□ 0.08
LDB3-203ENST00000372056 CNKSR1Q969H4 720 aa15.54■□□□□ 0.08
LDB3-203ENST00000372056 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.54■□□□□ 0.08
LDB3-203ENST00000372056 CWC22Q9HCG8 908 aaKnown RBP15.54■□□□□ 0.08
LDB3-203ENST00000372056 RBM8AQ9Y5S9 174 aaKnown RBP15.54■□□□□ 0.08
LDB3-203ENST00000372056 PDS5AQ29RF7 1337 aaKnown RBP15.54■□□□□ 0.08
LDB3-203ENST00000372056 MCM4P33991 863 aa15.54■□□□□ 0.08
LDB3-203ENST00000372056 CC2D2BQ6DHV5 1058 aa15.54■□□□□ 0.08
LDB3-203ENST00000372056 PRPF40BQ6NWY9 871 aaKnown RBP15.54■□□□□ 0.08
LDB3-203ENST00000372056 TNPO1Q92973 898 aaKnown RBP15.54■□□□□ 0.08
LDB3-203ENST00000372056 PODXL2Q9NZ53 605 aa15.54■□□□□ 0.08
LDB3-203ENST00000372056 GOLIM4O00461 696 aa15.53■□□□□ 0.08
LDB3-203ENST00000372056 POLD1P28340 1107 aa15.53■□□□□ 0.08
LDB3-203ENST00000372056 ADORA1P30542 326 aa15.53■□□□□ 0.08
LDB3-203ENST00000372056 CUL4AQ13619 759 aa15.53■□□□□ 0.08
LDB3-203ENST00000372056 CCDC102BQ68D86 513 aa15.53■□□□□ 0.08
LDB3-203ENST00000372056 TTC14Q96N46 770 aa15.53■□□□□ 0.08
LDB3-203ENST00000372056 MTFR1LQ9H019 292 aa15.53■□□□□ 0.08
LDB3-203ENST00000372056 TNRC6CQ9HCJ0 1690 aaKnown RBP15.53■□□□□ 0.08
LDB3-203ENST00000372056 CREB3L3Q68CJ9 461 aa15.52■□□□□ 0.08
LDB3-203ENST00000372056 VPS37DQ86XT2 251 aa15.52■□□□□ 0.08
LDB3-203ENST00000372056 ZGPATQ8N5A5 531 aaKnown RBP15.52■□□□□ 0.08
LDB3-203ENST00000372056 TM6SF1Q9BZW5 370 aa15.52■□□□□ 0.08
LDB3-203ENST00000372056 ANKIB1Q9P2G1 1089 aa15.52■□□□□ 0.08
LDB3-203ENST00000372056 ZNF804BA4D1E1 1349 aa15.52■□□□□ 0.08
LDB3-203ENST00000372056 TAF5LO75529 589 aa15.52■□□□□ 0.07
LDB3-203ENST00000372056 ZKSCAN1P17029 563 aaPredicted RBP15.52■□□□□ 0.07
LDB3-203ENST00000372056 DENND2AQ9ULE3 1009 aa15.52■□□□□ 0.07
LDB3-203ENST00000372056 ATP6V0A2Q9Y487 856 aa15.52■□□□□ 0.07
LDB3-203ENST00000372056 CHGBP05060 677 aa15.51■□□□□ 0.07
LDB3-203ENST00000372056 HELBQ8NG08 1087 aaPredicted RBP15.51■□□□□ 0.07
LDB3-203ENST00000372056 PPEF1O14829 653 aaPredicted RBP15.5■□□□□ 0.07
LDB3-203ENST00000372056 SLC27A2O14975 620 aa15.5■□□□□ 0.07
LDB3-203ENST00000372056 CASTP20810 708 aaKnown RBP15.5■□□□□ 0.07
LDB3-203ENST00000372056 ADCK5Q3MIX3 580 aa15.5■□□□□ 0.07
LDB3-203ENST00000372056 MCMDC2Q4G0Z9 681 aa15.5■□□□□ 0.07
LDB3-203ENST00000372056 CCDC24Q8N4L8 307 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms