RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 BICC1Q9H694 974 aaKnown RBP13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 PIM2Q9P1W9 311 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 LRRFIP2Q9Y608 721 aaKnown RBP13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 HMGN5P82970 282 aaKnown RBP13.69□□□□□ -0.22
TSPAN1-201ENST00000372003 CCDC152Q4G0S7 254 aa13.69□□□□□ -0.22
TSPAN1-201ENST00000372003 SEC31BQ9NQW1 1179 aa13.69□□□□□ -0.22
TSPAN1-201ENST00000372003 RBM27Q9P2N5 1060 aaKnown RBP13.69□□□□□ -0.22
TSPAN1-201ENST00000372003 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
TSPAN1-201ENST00000372003 LRP5O75197 1615 aa13.69□□□□□ -0.22
TSPAN1-201ENST00000372003 SALL3Q9BXA9 1300 aa13.69□□□□□ -0.22
TSPAN1-201ENST00000372003 NEK4P51957 841 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 STYK1Q6J9G0 422 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 ESYT1Q9BSJ8 1104 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 GREM2Q9H772 168 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 BCS1LQ9Y276 419 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 GNAI2P04899 355 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 CSF1RP07333 972 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 ALDH1B1P30837 517 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 DALRD3Q5D0E6 543 aaKnown RBP13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 OTUD7AQ8TE49 926 aaPredicted RBP13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 HDAC5Q9UQL6 1122 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 RIC1Q4ADV7 1423 aa13.68□□□□□ -0.22
TSPAN1-201ENST00000372003 WDR33Q9C0J8 1336 aaKnown RBP13.67□□□□□ -0.22
TSPAN1-201ENST00000372003 HOXA10P31260 410 aaPredicted RBP13.67□□□□□ -0.22
TSPAN1-201ENST00000372003 GTF2F1P35269 517 aaKnown RBP eCLIP13.67□□□□□ -0.22
TSPAN1-201ENST00000372003 MYRIPQ8NFW9 859 aa13.67□□□□□ -0.22
TSPAN1-201ENST00000372003 CELF1Q92879 486 aaKnown RBP13.67□□□□□ -0.22
TSPAN1-201ENST00000372003 STAP2Q9UGK3 403 aa13.67□□□□□ -0.22
TSPAN1-201ENST00000372003 ITGA6P23229 1130 aa13.66□□□□□ -0.22
TSPAN1-201ENST00000372003 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
TSPAN1-201ENST00000372003 CRAMP1Q96RY5 1269 aa13.66□□□□□ -0.22
TSPAN1-201ENST00000372003 FAM13BQ9NYF5 915 aa13.66□□□□□ -0.22
TSPAN1-201ENST00000372003 TNRC6CQ9HCJ0 1690 aaKnown RBP13.66□□□□□ -0.22
TSPAN1-201ENST00000372003 ANKRD18BA2A2Z9 1011 aa13.65□□□□□ -0.22
TSPAN1-201ENST00000372003 TPM3P06753 285 aa13.65□□□□□ -0.22
TSPAN1-201ENST00000372003 IFIT5Q13325 482 aaKnown RBP13.65□□□□□ -0.22
TSPAN1-201ENST00000372003 GRAPQ13588 217 aa13.65□□□□□ -0.22
TSPAN1-201ENST00000372003 GPR162Q16538 588 aa13.65□□□□□ -0.22
TSPAN1-201ENST00000372003 CCDC57Q2TAC2 916 aa13.65□□□□□ -0.22
TSPAN1-201ENST00000372003 GRAPLQ8TC17 118 aaPredicted RBP13.65□□□□□ -0.22
TSPAN1-201ENST00000372003 PIBF1Q8WXW3 757 aa13.65□□□□□ -0.22
TSPAN1-201ENST00000372003 C21orf2O43822 256 aa13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 SMARCA5O60264 1052 aaPredicted RBP13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 PTMAP06454 111 aaKnown RBP13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 RPS8P62241 208 aaKnown RBP13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 RABL6Q3YEC7 729 aaPredicted RBP13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 TAF7LQ5H9L4 462 aa13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 SLC51AQ86UW1 340 aa13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 ZNF594Q96JF6 807 aaPredicted RBP13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 NSFL1CQ9UNZ2 370 aaKnown RBP13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 ANKRD31Q8N7Z5 1873 aa13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 BBOX1O75936 387 aa13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 ANKRD18AQ8IVF6 992 aa13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 CDC5LQ99459 802 aaKnown RBP13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 LRRCC1Q9C099 1032 aa13.64□□□□□ -0.23
TSPAN1-201ENST00000372003 PDIA4P13667 645 aaKnown RBP13.63□□□□□ -0.23
TSPAN1-201ENST00000372003 YBX3P16989 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
TSPAN1-201ENST00000372003 MX1P20591 662 aa13.63□□□□□ -0.23
TSPAN1-201ENST00000372003 CHMLP26374 656 aa13.63□□□□□ -0.23
TSPAN1-201ENST00000372003 IGHMBP2P38935 993 aaKnown RBP13.63□□□□□ -0.23
TSPAN1-201ENST00000372003 KLHDC4Q8TBB5 520 aa13.63□□□□□ -0.23
TSPAN1-201ENST00000372003 MPHOSPH8Q99549 860 aa13.63□□□□□ -0.23
TSPAN1-201ENST00000372003 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
TSPAN1-201ENST00000372003 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
TSPAN1-201ENST00000372003 DDX60Q8IY21 1712 aaKnown RBP13.62□□□□□ -0.23
TSPAN1-201ENST00000372003 SRGAP3O43295 1099 aa13.62□□□□□ -0.23
TSPAN1-201ENST00000372003 TMX4Q9H1E5 349 aaPredicted RBP13.62□□□□□ -0.23
TSPAN1-201ENST00000372003 SPTLC3Q9NUV7 552 aa13.62□□□□□ -0.23
TSPAN1-201ENST00000372003 ATP6V1DQ9Y5K8 247 aa13.62□□□□□ -0.23
TSPAN1-201ENST00000372003 PNMA6EA0A0J9YXQ4 647 aa13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 ATP8B2P98198 1209 aa13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 UTP14CQ5TAP6 766 aaKnown RBP13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 PRDM4Q9UKN5 801 aa13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 RTL9Q8NET4 1388 aa13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 RPAP1Q9BWH6 1393 aaPredicted RBP13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 KIF13BQ9NQT8 1826 aa13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 HSPA4P34932 840 aa13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 LDHAL6AQ6ZMR3 332 aa13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 ARHGAP27Q6ZUM4 889 aa13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 C7orf43Q8WVR3 580 aa13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
TSPAN1-201ENST00000372003 COL11A2P13942 1736 aaPredicted RBP13.6□□□□□ -0.23
TSPAN1-201ENST00000372003 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
TSPAN1-201ENST00000372003 UBE2HP62256 183 aa13.6□□□□□ -0.23
TSPAN1-201ENST00000372003 NOLC1Q14978 699 aaKnown RBP eCLIP13.6□□□□□ -0.23
TSPAN1-201ENST00000372003 USP48Q86UV5 1035 aa13.6□□□□□ -0.23
TSPAN1-201ENST00000372003 SP8Q8IXZ3 490 aa13.6□□□□□ -0.23
TSPAN1-201ENST00000372003 PUS3Q9BZE2 481 aaKnown RBP13.6□□□□□ -0.23
TSPAN1-201ENST00000372003 SIL1Q9H173 461 aa13.6□□□□□ -0.23
TSPAN1-201ENST00000372003 CNNM1Q9NRU3 951 aa13.6□□□□□ -0.23
TSPAN1-201ENST00000372003 BSDC1Q9NW68 430 aaPredicted RBP13.6□□□□□ -0.23
TSPAN1-201ENST00000372003 PA2G4Q9UQ80 394 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms