RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 COL14A1Q05707 1796 aaKnown RBP8.51□□□□□ -1.05
USP1-202ENST00000371146 ECE2O60344 883 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 LMNB1P20700 586 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 PHKA1P46020 1223 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 DDRGK1Q96HY6 314 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 CNOT7Q9UIV1 285 aaKnown RBP8.51□□□□□ -1.05
USP1-202ENST00000371146 HDAC9Q9UKV0 1011 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 EYA2O00167 538 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 ALDH1L1O75891 902 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 IARSP41252 1262 aaKnown RBP8.51□□□□□ -1.05
USP1-202ENST00000371146 SPRYD3Q8NCJ5 442 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 LRRCC1Q9C099 1032 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 PTPRCP08575 1304 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 ADGRB2O60241 1585 aa8.51□□□□□ -1.05
USP1-202ENST00000371146 POLR3DP05423 398 aaPredicted RBP8.5□□□□□ -1.05
USP1-202ENST00000371146 HOXB7P09629 217 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 POTEIP0CG38 1075 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 POTEJP0CG39 1038 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 GMPSP49915 693 aaPredicted RBP8.5□□□□□ -1.05
USP1-202ENST00000371146 NBR1Q14596 966 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 MICALL2Q8IY33 904 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 RTKN2Q8IZC4 609 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 OTUD7AQ8TE49 926 aaPredicted RBP8.5□□□□□ -1.05
USP1-202ENST00000371146 DCPSQ96C86 337 aaKnown RBP8.5□□□□□ -1.05
USP1-202ENST00000371146 DIAPH3Q9NSV4 1193 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 CEMIPQ8WUJ3 1361 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 TM4SF1P30408 202 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 HAND2P61296 217 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 KIAA1211Q6ZU35 1233 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 TDRD3Q9H7E2 651 aaKnown RBP8.5□□□□□ -1.05
USP1-202ENST00000371146 PCDHB15Q9Y5E8 787 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 CYP7A1P22680 504 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 AATFQ9NY61 560 aaKnown RBP eCLIP8.5□□□□□ -1.05
USP1-202ENST00000371146 POLLQ9UGP5 575 aa8.5□□□□□ -1.05
USP1-202ENST00000371146 TGFB2P61812 414 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 KRT26Q7Z3Y9 468 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 USP48Q86UV5 1035 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 XAGE2Q96GT9 111 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 PSMD14O00487 310 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 DTNBO60941 627 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
USP1-202ENST00000371146 CXCL9Q07325 125 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 CWC27Q6UX04 472 aaKnown RBP8.49□□□□□ -1.05
USP1-202ENST00000371146 ISCA1Q9BUE6 129 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 LTN1O94822 1766 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 RGPD2P0DJD1 1756 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 SLIT3O75094 1523 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 HSP90AA1P07900 732 aaKnown RBP8.49□□□□□ -1.05
USP1-202ENST00000371146 TBC1D16Q8TBP0 767 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 RHPN1Q8TCX5 695 aa8.49□□□□□ -1.05
USP1-202ENST00000371146 KNDC1Q76NI1 1749 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 NHSL1Q5SYE7 1610 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 VEGFAP15692 232 aaPredicted RBP8.48□□□□□ -1.05
USP1-202ENST00000371146 MFAP1P55081 439 aaKnown RBP8.48□□□□□ -1.05
USP1-202ENST00000371146 SLC9C2Q5TAH2 1124 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 CNPY4Q8N129 248 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 FEZ1Q99689 392 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 GLIS2Q9BZE0 524 aaPredicted RBP8.48□□□□□ -1.05
USP1-202ENST00000371146 ANKRD2Q9GZV1 360 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 TLR7Q9NYK1 1049 aaKnown RBP8.48□□□□□ -1.05
USP1-202ENST00000371146 XDHP47989 1333 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 KDM2BQ8NHM5 1336 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 TRAF5O00463 557 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 TDO2P48775 406 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 CCDC84Q86UT8 332 aaPredicted RBP8.48□□□□□ -1.05
USP1-202ENST00000371146 MAPKAPK5Q8IW41 473 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 ANO2Q9NQ90 1003 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 BABAM1Q9NWV8 329 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 AKAP2Q9Y2D5 859 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 CTDP1Q9Y5B0 961 aaPredicted RBP8.48□□□□□ -1.05
USP1-202ENST00000371146 PCDHAC2Q9Y5I4 1007 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 PDE4DIPQ5VU43 2346 aa8.48□□□□□ -1.05
USP1-202ENST00000371146 PRDM1O75626 825 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 SLURP2P0DP57 97 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 PRDX5P30044 214 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 FOSBP53539 338 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 RAB11FIP4Q86YS3 637 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 MAGEB6Q8N7X4 407 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 AIDAQ96BJ3 306 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.47□□□□□ -1.05
USP1-202ENST00000371146 ADCY9O60503 1353 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 NF2P35240 595 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 IL15P40933 162 aaPredicted RBP8.47□□□□□ -1.05
USP1-202ENST00000371146 HSP90AB4PQ58FF6 505 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 NAA16Q6N069 864 aaPredicted RBP8.47□□□□□ -1.05
USP1-202ENST00000371146 MOB2Q70IA6 237 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 SUPT20HQ8NEM7 779 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 USP17L8P0C7I0 530 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 ZAP70P43403 619 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 VPS53Q5VIR6 699 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 ANGEL2Q5VTE6 544 aaKnown RBP8.47□□□□□ -1.05
USP1-202ENST00000371146 ATP6V0A2Q9Y487 856 aa8.47□□□□□ -1.05
USP1-202ENST00000371146 ERBB4Q15303 1308 aa8.46□□□□□ -1.05
USP1-202ENST00000371146 H7C1W4 665 aa8.46□□□□□ -1.05
USP1-202ENST00000371146 IBSPP21815 317 aaPredicted RBP8.46□□□□□ -1.05
USP1-202ENST00000371146 TNIP1Q15025 636 aa8.46□□□□□ -1.05
USP1-202ENST00000371146 TRMT1LQ7Z2T5 733 aaKnown RBP8.46□□□□□ -1.05
USP1-202ENST00000371146 ZNF784Q8NCA9 323 aaPredicted RBP8.46□□□□□ -1.05
USP1-202ENST00000371146 KIF1BPQ96EK5 621 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms