RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ETF1P62495 437 aaKnown RBP14.4□□□□□ -0.1
GPC4-201ENST00000370828 TSG101Q99816 390 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 PA2G4Q9UQ80 394 aaKnown RBP14.4□□□□□ -0.1
GPC4-201ENST00000370828 MAP3K2Q9Y2U5 619 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 TLDC2A0PJX2 215 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 SMIM23A6NLE4 172 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 KIF4AO95239 1232 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 IDEP14735 1019 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 KIF5BP33176 963 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 BIRC2Q13490 618 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 NCOA7Q8NI08 942 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 NSRP1Q9H0G5 558 aaKnown RBP14.4□□□□□ -0.1
GPC4-201ENST00000370828 RPGRIP1LQ68CZ1 1315 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 USHBP1Q8N6Y0 703 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 GOLGA6BA6NDN3 693 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 LONRF3Q496Y0 759 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 IGSF22Q8N9C0 903 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 CTNNBL1Q8WYA6 563 aaPredicted RBP14.39□□□□□ -0.11
GPC4-201ENST00000370828 LRP2BPQ9P2M1 347 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 FAM184BQ9ULE4 1060 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 PALD1Q9ULE6 856 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 MACROD2A1Z1Q3 448 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 NCBP1Q09161 790 aaKnown RBP14.39□□□□□ -0.11
GPC4-201ENST00000370828 MTX1Q13505 466 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 CACTINQ8WUQ7 758 aaKnown RBP14.39□□□□□ -0.11
GPC4-201ENST00000370828 JRKLQ9Y4A0 524 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 NLRP5P59047 1200 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 CCDC42Q96M95 316 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 PDE11AQ9HCR9 933 aa14.39□□□□□ -0.11
GPC4-201ENST00000370828 NR1I2O75469 434 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 FBXO38Q6PIJ6 1188 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 PHACTR3Q96KR7 559 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 FGFR1OPO95684 399 aaKnown RBP14.38□□□□□ -0.11
GPC4-201ENST00000370828 CCT6AP40227 531 aaKnown RBP14.38□□□□□ -0.11
GPC4-201ENST00000370828 UBXN1Q04323 297 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 SF3A3Q12874 501 aaKnown RBP eCLIP14.38□□□□□ -0.11
GPC4-201ENST00000370828 CCDC40Q4G0X9 1142 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 KIF6Q6ZMV9 814 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 CNGA4Q8IV77 575 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 NUTM2AQ8IVF1 878 aaPredicted RBP14.38□□□□□ -0.11
GPC4-201ENST00000370828 CCDC155Q8N6L0 562 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 BUB1BO60566 1050 aaPredicted RBP14.38□□□□□ -0.11
GPC4-201ENST00000370828 ELP1O95163 1332 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 BRD3Q15059 726 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 METTL24Q5JXM2 366 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 TAOK3Q9H2K8 898 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 ARHGEF11O15085 1522 aa14.38□□□□□ -0.11
GPC4-201ENST00000370828 EFCAB8A8MWE9 144 aa14.37□□□□□ -0.11
GPC4-201ENST00000370828 ATP2B2Q01814 1243 aa14.37□□□□□ -0.11
GPC4-201ENST00000370828 NAA30Q147X3 362 aaPredicted RBP14.37□□□□□ -0.11
GPC4-201ENST00000370828 UBA7P41226 1012 aa14.37□□□□□ -0.11
GPC4-201ENST00000370828 ARHGAP25P42331 645 aa14.37□□□□□ -0.11
GPC4-201ENST00000370828 SATB1Q01826 763 aa14.37□□□□□ -0.11
GPC4-201ENST00000370828 PNMA8AQ86V59 439 aaPredicted RBP14.37□□□□□ -0.11
GPC4-201ENST00000370828 DBF4Q9UBU7 674 aaPredicted RBP14.37□□□□□ -0.11
GPC4-201ENST00000370828 ABCF2Q9UG63 623 aa14.37□□□□□ -0.11
GPC4-201ENST00000370828 SH3BGRP55822 239 aaPredicted RBP14.37□□□□□ -0.11
GPC4-201ENST00000370828 LUC7L2Q9Y383 392 aaKnown RBP14.37□□□□□ -0.11
GPC4-201ENST00000370828 NBPF6Q5VWK0 638 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 NBPF5PQ86XG9 351 aaPredicted RBP14.36□□□□□ -0.11
GPC4-201ENST00000370828 NBPF4Q96M43 638 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 UBA5Q9GZZ9 404 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 PIK3R4Q99570 1358 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 KIF3CO14782 793 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 MCMDC2Q4G0Z9 681 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 SND1Q7KZF4 910 aaKnown RBP eCLIP14.36□□□□□ -0.11
GPC4-201ENST00000370828 DESI2Q9BSY9 194 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 DDX41Q9UJV9 622 aaKnown RBP14.36□□□□□ -0.11
GPC4-201ENST00000370828 MSH6P52701 1360 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
GPC4-201ENST00000370828 KIAA0753Q2KHM9 967 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 CCDC194A0A1B0GVG4 234 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 SGSM2O43147 1006 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 ACTN2P35609 894 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 ZMYM3Q14202 1370 aa14.36□□□□□ -0.11
GPC4-201ENST00000370828 CLCN6P51797 869 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 SPTY2D1Q68D10 685 aaPredicted RBP14.35□□□□□ -0.11
GPC4-201ENST00000370828 OTUD7BQ6GQQ9 843 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 TTC6Q86TZ1 520 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 CABS1Q96KC9 395 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 MMRN2Q9H8L6 949 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 SAMD15Q9P1V8 674 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 BAIAP2L1Q9UHR4 511 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 ANKRD65E5RJM6 399 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 ADKP55263 362 aaKnown RBP14.35□□□□□ -0.11
GPC4-201ENST00000370828 IRX5P78411 483 aaPredicted RBP14.35□□□□□ -0.11
GPC4-201ENST00000370828 BCAS4Q8TDM0 211 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 A0A087WZG4 1122 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 CCDC160A6NGH7 325 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 MYO1CO00159 1063 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 ZBTB43O43298 467 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 JAK2O60674 1132 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 CABP4P57796 275 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 GNGT1P63211 74 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 PLEKHA4Q9H4M7 779 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 GNL3LQ9NVN8 582 aaKnown RBP14.35□□□□□ -0.11
GPC4-201ENST00000370828 SERPINA10Q9UK55 444 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
GPC4-201ENST00000370828 TCERG1LQ5VWI1 586 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms