RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 RBM25P49756 843 aaKnown RBP9.75□□□□□ -0.85
ABCA4-201ENST00000370225 EAPPQ56P03 285 aaPredicted RBP9.75□□□□□ -0.85
ABCA4-201ENST00000370225 TSNARE1Q96NA8 513 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 CHMP2AO43633 222 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 FAM13AO94988 1023 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 LRSAM1Q6UWE0 723 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 LRRC27Q9C0I9 530 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 NSD2O96028 1365 aa9.75□□□□□ -0.85
ABCA4-201ENST00000370225 MAP9Q49MG5 647 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 RNF187Q5TA31 235 aaPredicted RBP9.74□□□□□ -0.85
ABCA4-201ENST00000370225 FNBP4Q8N3X1 1017 aaPredicted RBP9.74□□□□□ -0.85
ABCA4-201ENST00000370225 ADCY5O95622 1261 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 MSL1Q68DK7 614 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 PDCL2Q8N4E4 241 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 FAM89AQ96GI7 184 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 PAIP2Q9BPZ3 127 aaKnown RBP9.74□□□□□ -0.85
ABCA4-201ENST00000370225 PICK1Q9NRD5 415 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 APOBRQ0VD83 1088 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 DDX19AQ9NUU7 478 aaKnown RBP9.74□□□□□ -0.85
ABCA4-201ENST00000370225 KANK3Q6NY19 840 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 SPAG5Q96R06 1193 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 GINS2Q9Y248 185 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 PPP1R14CQ8TAE6 165 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 EYA3Q99504 573 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 SHTN1A0MZ66 631 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 ZFYP08048 801 aaPredicted RBP9.74□□□□□ -0.85
ABCA4-201ENST00000370225 IKBKGQ9Y6K9 419 aa9.74□□□□□ -0.85
ABCA4-201ENST00000370225 FSD2A1L4K1 749 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 CCDC50Q8IVM0 306 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 RMND1Q9NWS8 449 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 PCDH11XQ9BZA7 1347 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 PCDH11YQ9BZA8 1340 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 GCP02774 474 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 GBP3Q9H0R5 595 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 C19orf44Q9H6X5 657 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 PLCH2O75038 1416 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 ESPNB1AK53 854 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 KRT2P35908 639 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 GSTA5Q7RTV2 222 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 TMX3Q96JJ7 454 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 IMPG2Q9BZV3 1241 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 AKR1B10O60218 316 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 TCP10Q12799 353 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 CEP63Q96MT8 703 aa9.73□□□□□ -0.85
ABCA4-201ENST00000370225 UBASH3AP57075 661 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 ZFP91Q96JP5 570 aaPredicted RBP9.72□□□□□ -0.85
ABCA4-201ENST00000370225 ZNF165P49910 485 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 CBX1P83916 185 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
ABCA4-201ENST00000370225 TMTC2Q8N394 836 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 MRPL50Q8N5N7 158 aaKnown RBP9.72□□□□□ -0.85
ABCA4-201ENST00000370225 FAM107BQ9H098 131 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 ABCC1P33527 1531 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 SYCP2Q9BX26 1530 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 NUCB1Q02818 461 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 FCHSD1Q86WN1 690 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 PYM1Q9BRP8 204 aaKnown RBP9.72□□□□□ -0.85
ABCA4-201ENST00000370225 ANKRD2Q9GZV1 360 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 PRDM10Q9NQV6 1147 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 DDX39AO00148 427 aaKnown RBP9.72□□□□□ -0.85
ABCA4-201ENST00000370225 RNF113AO15541 343 aaKnown RBP9.72□□□□□ -0.85
ABCA4-201ENST00000370225 PDE1AP54750 535 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 KIAA0753Q2KHM9 967 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 TEX11Q8IYF3 940 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 NAA15Q9BXJ9 866 aaKnown RBP9.72□□□□□ -0.85
ABCA4-201ENST00000370225 TMOD4Q9NZQ9 345 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 TEX14Q8IWB6 1497 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 FERP16591 822 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 MAEAQ7L5Y9 396 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 A0A1W2PRG0 241 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 TAF5LO75529 589 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 URB2Q14146 1524 aaKnown RBP9.72□□□□□ -0.85
ABCA4-201ENST00000370225 NPATQ14207 1427 aa9.72□□□□□ -0.85
ABCA4-201ENST00000370225 ZSCAN22P10073 491 aaPredicted RBP9.71□□□□□ -0.85
ABCA4-201ENST00000370225 KCNA6P17658 529 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 STX17P56962 302 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 CTR9Q6PD62 1173 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 ZNF830Q96NB3 372 aaPredicted RBP9.71□□□□□ -0.85
ABCA4-201ENST00000370225 MAP3K5Q99683 1374 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 APBA3O96018 575 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 PARP1P09874 1014 aaKnown RBP9.71□□□□□ -0.85
ABCA4-201ENST00000370225 ANO6Q4KMQ2 910 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 TSPYL6Q8N831 410 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 RNMTO43148 476 aaKnown RBP9.71□□□□□ -0.85
ABCA4-201ENST00000370225 MBD4O95243 580 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 MYCLP12524 364 aaPredicted RBP9.71□□□□□ -0.85
ABCA4-201ENST00000370225 GNAQP50148 359 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 BMP2KLQ5H9B9 411 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 USP37Q86T82 979 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 ZNF594Q96JF6 807 aaPredicted RBP9.71□□□□□ -0.85
ABCA4-201ENST00000370225 TNNQ9UQP3 1299 aa9.71□□□□□ -0.85
ABCA4-201ENST00000370225 CFAP65Q6ZU64 1925 aaKnown RBP9.71□□□□□ -0.86
ABCA4-201ENST00000370225 B4DLN1 442 aa9.71□□□□□ -0.86
ABCA4-201ENST00000370225 MRPL12P52815 198 aaKnown RBP9.71□□□□□ -0.86
ABCA4-201ENST00000370225 SNW1Q13573 536 aaKnown RBP9.71□□□□□ -0.86
ABCA4-201ENST00000370225 PPP4R3BQ5MIZ7 849 aa9.71□□□□□ -0.86
ABCA4-201ENST00000370225 ITGA6P23229 1130 aa9.71□□□□□ -0.86
ABCA4-201ENST00000370225 DCAF17Q5H9S7 520 aaPredicted RBP9.71□□□□□ -0.86
ABCA4-201ENST00000370225 ESYT1Q9BSJ8 1104 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms