RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 SPDYE3A6NKU9 549 aa14.29□□□□□ -0.12
TMEM56-201ENST00000370203 TAF5LO75529 589 aa14.29□□□□□ -0.12
TMEM56-201ENST00000370203 CSPG5O95196 566 aa14.29□□□□□ -0.12
TMEM56-201ENST00000370203 TAF12Q16514 161 aa14.29□□□□□ -0.12
TMEM56-201ENST00000370203 DCAF17Q5H9S7 520 aaPredicted RBP14.29□□□□□ -0.12
TMEM56-201ENST00000370203 SSX2IPQ9Y2D8 614 aa14.29□□□□□ -0.12
TMEM56-201ENST00000370203 TTC21AQ8NDW8 1320 aa14.28□□□□□ -0.12
TMEM56-201ENST00000370203 IL2RBP14784 551 aa14.28□□□□□ -0.12
TMEM56-201ENST00000370203 GRIPAP1Q4V328 841 aa14.28□□□□□ -0.12
TMEM56-201ENST00000370203 FAM13AO94988 1023 aa14.28□□□□□ -0.12
TMEM56-201ENST00000370203 ERMNQ8TAM6 284 aa14.28□□□□□ -0.12
TMEM56-201ENST00000370203 KARSQ15046 597 aaKnown RBP14.28□□□□□ -0.12
TMEM56-201ENST00000370203 MAP9Q49MG5 647 aa14.28□□□□□ -0.12
TMEM56-201ENST00000370203 IKBKGQ9Y6K9 419 aa14.28□□□□□ -0.12
TMEM56-201ENST00000370203 PLCB3Q01970 1234 aa14.28□□□□□ -0.12
TMEM56-201ENST00000370203 FAM114A1Q8IWE2 563 aa14.28□□□□□ -0.12
TMEM56-201ENST00000370203 TSNARE1Q96NA8 513 aa14.28□□□□□ -0.12
TMEM56-201ENST00000370203 RRP36Q96EU6 259 aaKnown RBP14.28□□□□□ -0.12
TMEM56-201ENST00000370203 ACTN2P35609 894 aa14.27□□□□□ -0.12
TMEM56-201ENST00000370203 CEP135Q66GS9 1140 aa14.27□□□□□ -0.12
TMEM56-201ENST00000370203 ZNF174Q15697 407 aa14.27□□□□□ -0.12
TMEM56-201ENST00000370203 KIAA0753Q2KHM9 967 aa14.27□□□□□ -0.12
TMEM56-201ENST00000370203 GIMAP7Q8NHV1 300 aa14.27□□□□□ -0.12
TMEM56-201ENST00000370203 DDX19AQ9NUU7 478 aaKnown RBP14.27□□□□□ -0.12
TMEM56-201ENST00000370203 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.12
TMEM56-201ENST00000370203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.27□□□□□ -0.125e-6■■■■■ 46.2
TMEM56-201ENST00000370203 UFL1O94874 794 aa14.27□□□□□ -0.13
TMEM56-201ENST00000370203 FAM98CQ17RN3 349 aaKnown RBP14.27□□□□□ -0.13
TMEM56-201ENST00000370203 TNRQ92752 1358 aa14.27□□□□□ -0.13
TMEM56-201ENST00000370203 CTAGE5O15320 804 aa14.27□□□□□ -0.13
TMEM56-201ENST00000370203 PPP4R3BQ5MIZ7 849 aa14.27□□□□□ -0.13
TMEM56-201ENST00000370203 LDHBP07195 334 aaKnown RBP14.27□□□□□ -0.13
TMEM56-201ENST00000370203 KRT9P35527 623 aa14.27□□□□□ -0.13
TMEM56-201ENST00000370203 LMOD1P29536 600 aaPredicted RBP14.26□□□□□ -0.13
TMEM56-201ENST00000370203 RAPGEF1Q13905 1077 aa14.26□□□□□ -0.13
TMEM56-201ENST00000370203 EAPPQ56P03 285 aaPredicted RBP14.26□□□□□ -0.13
TMEM56-201ENST00000370203 TAOK3Q9H2K8 898 aa14.26□□□□□ -0.13
TMEM56-201ENST00000370203 PCDHB15Q9Y5E8 787 aa14.26□□□□□ -0.13
TMEM56-201ENST00000370203 FANCAO15360 1455 aa14.26□□□□□ -0.13
TMEM56-201ENST00000370203 PDE1AP54750 535 aa14.26□□□□□ -0.13
TMEM56-201ENST00000370203 TPTE2Q6XPS3 522 aa14.26□□□□□ -0.13
TMEM56-201ENST00000370203 MAPK8IP1Q9UQF2 711 aa14.26□□□□□ -0.13
TMEM56-201ENST00000370203 MYCLP12524 364 aaPredicted RBP14.26□□□□□ -0.13
TMEM56-201ENST00000370203 KRT5P13647 590 aa14.26□□□□□ -0.13
TMEM56-201ENST00000370203 IRX5P78411 483 aaPredicted RBP14.26□□□□□ -0.13
TMEM56-201ENST00000370203 MXRA7P84157 204 aa14.26□□□□□ -0.13
TMEM56-201ENST00000370203 DNAJC21Q5F1R6 531 aaKnown RBP14.26□□□□□ -0.13
TMEM56-201ENST00000370203 ARMT1Q9H993 441 aa14.26□□□□□ -0.13
TMEM56-201ENST00000370203 IQGAP2Q13576 1575 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 SMARCC1Q92922 1105 aaPredicted RBP14.25□□□□□ -0.13
TMEM56-201ENST00000370203 GBP3Q9H0R5 595 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 C14orf93Q9H972 538 aaKnown RBP14.25□□□□□ -0.13
TMEM56-201ENST00000370203 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 ABCC11Q96J66 1382 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 PRDM1O75626 825 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 CCDC175P0C221 793 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 RNASE9P60153 205 aaKnown RBP14.25□□□□□ -0.13
TMEM56-201ENST00000370203 USH1GQ495M9 461 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 CCDC25Q86WR0 208 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 NBPF7P0C2Y1 421 aaPredicted RBP14.25□□□□□ -0.13
TMEM56-201ENST00000370203 NUCB1Q02818 461 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 TRAPPC3LQ5T215 181 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 C6orf50Q9HD87 102 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 FERP16591 822 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 EP400NLQ6ZTU2 488 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 KRT2P35908 639 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 MRPL50Q8N5N7 158 aaKnown RBP14.25□□□□□ -0.13
TMEM56-201ENST00000370203 IPO4Q8TEX9 1081 aaKnown RBP14.25□□□□□ -0.13
TMEM56-201ENST00000370203 ZMYND15Q9H091 742 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 DACT1Q9NYF0 836 aa14.25□□□□□ -0.13
TMEM56-201ENST00000370203 MBD4O95243 580 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 RAD51AP2Q09MP3 1159 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 LETM2Q2VYF4 491 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 KSR2Q6VAB6 950 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 ESYT1Q9BSJ8 1104 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 WDR7Q9Y4E6 1490 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 LMTK3Q96Q04 1460 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 PRXQ9BXM0 1461 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 hCG_1642624A0A1W2PR95 340 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 TIMM10P62072 90 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 UBXN1Q04323 297 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 RASA3Q14644 834 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 SELENOSQ9BQE4 189 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 LZTFL1Q9NQ48 299 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 ZGPATQ8N5A5 531 aaKnown RBP14.24□□□□□ -0.13
TMEM56-201ENST00000370203 TBC1D7Q9P0N9 293 aa14.24□□□□□ -0.13
TMEM56-201ENST00000370203 DNAI1Q9UI46 699 aa14.23□□□□□ -0.13
TMEM56-201ENST00000370203 UBE2HP62256 183 aa14.23□□□□□ -0.13
TMEM56-201ENST00000370203 NAA15Q9BXJ9 866 aaKnown RBP14.23□□□□□ -0.13
TMEM56-201ENST00000370203 NYXQ9GZU5 481 aa14.23□□□□□ -0.13
TMEM56-201ENST00000370203 VWA3AA6NCI4 1184 aa14.23□□□□□ -0.13
TMEM56-201ENST00000370203 MYL10Q9BUA6 226 aa14.23□□□□□ -0.13
TMEM56-201ENST00000370203 CCNL1Q9UK58 526 aaPredicted RBP14.23□□□□□ -0.13
TMEM56-201ENST00000370203 PLEKHH1Q9ULM0 1364 aa14.23□□□□□ -0.13
TMEM56-201ENST00000370203 PTPDC1A2A3K4 754 aa14.23□□□□□ -0.13
TMEM56-201ENST00000370203 CCT6AP40227 531 aaKnown RBP14.23□□□□□ -0.13
TMEM56-201ENST00000370203 AATFQ9NY61 560 aaKnown RBP eCLIP14.23□□□□□ -0.13
TMEM56-201ENST00000370203 CCDC169A6NNP5 214 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms