RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ANKRD2Q9GZV1 360 aa23.48■■□□□ 1.35
CHTOP-204ENST00000368694 ANTXR1Q9H6X2 564 aa23.48■■□□□ 1.35
CHTOP-204ENST00000368694 ARID4AP29374 1257 aaPredicted RBP23.48■■□□□ 1.35
CHTOP-204ENST00000368694 BRIP1Q9BX63 1249 aa23.48■■□□□ 1.35
CHTOP-204ENST00000368694 A0A0D9SFI3 127 aa23.47■■□□□ 1.35
CHTOP-204ENST00000368694 RAD50Q92878 1312 aa23.47■■□□□ 1.35
CHTOP-204ENST00000368694 MYH7P12883 1935 aa23.46■■□□□ 1.35
CHTOP-204ENST00000368694 MCCP23508 829 aa23.46■■□□□ 1.35
CHTOP-204ENST00000368694 BCAMP50895 628 aa23.46■■□□□ 1.35
CHTOP-204ENST00000368694 DAXXQ9UER7 740 aaPredicted RBP23.46■■□□□ 1.35
CHTOP-204ENST00000368694 WTIPA6NIX2 430 aaPredicted RBP23.45■■□□□ 1.35
CHTOP-204ENST00000368694 KLRG2A4D1S0 409 aaPredicted RBP23.45■■□□□ 1.34
CHTOP-204ENST00000368694 ANKIB1Q9P2G1 1089 aa23.45■■□□□ 1.34
CHTOP-204ENST00000368694 KIF2CQ99661 725 aa23.44■■□□□ 1.34
CHTOP-204ENST00000368694 CHGBP05060 677 aa23.44■■□□□ 1.34
CHTOP-204ENST00000368694 HOXA10P31260 410 aaPredicted RBP23.44■■□□□ 1.34
CHTOP-204ENST00000368694 DEKP35659 375 aaKnown RBP23.44■■□□□ 1.34
CHTOP-204ENST00000368694 PDE6BP35913 854 aa23.44■■□□□ 1.34
CHTOP-204ENST00000368694 LRRFIP1Q32MZ4 808 aaKnown RBP23.44■■□□□ 1.34
CHTOP-204ENST00000368694 CAVIN4Q5BKX8 364 aa23.44■■□□□ 1.34
CHTOP-204ENST00000368694 VPS37DQ86XT2 251 aa23.44■■□□□ 1.34
CHTOP-204ENST00000368694 PDGFDQ9GZP0 370 aaPredicted RBP23.44■■□□□ 1.34
CHTOP-204ENST00000368694 LSG1Q9H089 658 aaKnown RBP23.44■■□□□ 1.34
CHTOP-204ENST00000368694 COL11A2P13942 1736 aaPredicted RBP23.43■■□□□ 1.34
CHTOP-204ENST00000368694 EPB41L2O43491 1005 aaKnown RBP23.43■■□□□ 1.34
CHTOP-204ENST00000368694 GYG1P46976 350 aa23.43■■□□□ 1.34
CHTOP-204ENST00000368694 TTF1Q15361 905 aaPredicted RBP23.43■■□□□ 1.34
CHTOP-204ENST00000368694 MYO5AQ9Y4I1 1855 aaKnown RBP23.43■■□□□ 1.34
CHTOP-204ENST00000368694 RASGRF1Q13972 1273 aa23.42■■□□□ 1.34
CHTOP-204ENST00000368694 BECN1Q14457 450 aa23.42■■□□□ 1.34
CHTOP-204ENST00000368694 SPATA5Q8NB90 893 aa23.42■■□□□ 1.34
CHTOP-204ENST00000368694 CRAMP1Q96RY5 1269 aa23.42■■□□□ 1.34
CHTOP-204ENST00000368694 HMG20BQ9P0W2 317 aa23.42■■□□□ 1.34
CHTOP-204ENST00000368694 ZNF804BA4D1E1 1349 aa23.42■■□□□ 1.34
CHTOP-204ENST00000368694 MED23Q9ULK4 1368 aa23.42■■□□□ 1.34
CHTOP-204ENST00000368694 CYP2E1P05181 493 aaPredicted RBP23.42■■□□□ 1.34
CHTOP-204ENST00000368694 SLC51AQ86UW1 340 aa23.42■■□□□ 1.34
CHTOP-204ENST00000368694 TICAM2Q86XR7 235 aa23.42■■□□□ 1.34
CHTOP-204ENST00000368694 BBOX1O75936 387 aa23.41■■□□□ 1.34
CHTOP-204ENST00000368694 GNL3LQ9NVN8 582 aaKnown RBP23.41■■□□□ 1.34
CHTOP-204ENST00000368694 MYH13Q9UKX3 1938 aa23.41■■□□□ 1.34
CHTOP-204ENST00000368694 RNF113AO15541 343 aaKnown RBP23.4■■□□□ 1.34
CHTOP-204ENST00000368694 SRGNP10124 158 aa23.4■■□□□ 1.34
CHTOP-204ENST00000368694 ZNF589Q86UQ0 364 aaPredicted RBP23.4■■□□□ 1.34
CHTOP-204ENST00000368694 IQSEC3Q9UPP2 1182 aaPredicted RBP23.4■■□□□ 1.34
CHTOP-204ENST00000368694 CACNA1SQ13698 1873 aa23.4■■□□□ 1.34
CHTOP-204ENST00000368694 XDHP47989 1333 aa23.4■■□□□ 1.34
CHTOP-204ENST00000368694 CCDC171Q6TFL3 1326 aa23.4■■□□□ 1.34
CHTOP-204ENST00000368694 SLC4A3P48751 1232 aa23.4■■□□□ 1.34
CHTOP-204ENST00000368694 PTH1RQ03431 593 aa23.4■■□□□ 1.34
CHTOP-204ENST00000368694 SLFNL1Q499Z3 407 aa23.4■■□□□ 1.34
CHTOP-204ENST00000368694 MCMDC2Q4G0Z9 681 aa23.4■■□□□ 1.34
CHTOP-204ENST00000368694 SEC62Q99442 399 aaKnown RBP23.4■■□□□ 1.34
CHTOP-204ENST00000368694 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.4■■□□□ 1.34
CHTOP-204ENST00000368694 NPR1P16066 1061 aa23.39■■□□□ 1.34
CHTOP-204ENST00000368694 KLRK1P26718 216 aa23.39■■□□□ 1.34
CHTOP-204ENST00000368694 IDH1O75874 414 aaKnown RBP23.39■■□□□ 1.33
CHTOP-204ENST00000368694 ZFYP08048 801 aaPredicted RBP23.39■■□□□ 1.33
CHTOP-204ENST00000368694 DOCK2Q92608 1830 aa23.38■■□□□ 1.33
CHTOP-204ENST00000368694 CCDC129Q6ZRS4 1044 aa23.38■■□□□ 1.33
CHTOP-204ENST00000368694 FAM84BQ96KN1 310 aaPredicted RBP23.38■■□□□ 1.33
CHTOP-204ENST00000368694 PIH1D3Q9NQM4 214 aaKnown RBP23.38■■□□□ 1.33
CHTOP-204ENST00000368694 HELLSQ9NRZ9 838 aa23.38■■□□□ 1.33
CHTOP-204ENST00000368694 NSFL1CQ9UNZ2 370 aaKnown RBP23.38■■□□□ 1.33
CHTOP-204ENST00000368694 LEMD3Q9Y2U8 911 aa23.38■■□□□ 1.33
CHTOP-204ENST00000368694 PPEF1O14829 653 aaPredicted RBP23.37■■□□□ 1.33
CHTOP-204ENST00000368694 HSPA4P34932 840 aa23.37■■□□□ 1.33
CHTOP-204ENST00000368694 ZMYM1Q5SVZ6 1142 aa23.37■■□□□ 1.33
CHTOP-204ENST00000368694 PALD1Q9ULE6 856 aa23.37■■□□□ 1.33
CHTOP-204ENST00000368694 LRRC37AA6NMS7 1700 aa23.37■■□□□ 1.33
CHTOP-204ENST00000368694 GPSM2P81274 684 aa23.37■■□□□ 1.33
CHTOP-204ENST00000368694 RABEP1Q15276 862 aa23.37■■□□□ 1.33
CHTOP-204ENST00000368694 WASHC4Q2M389 1173 aa23.37■■□□□ 1.33
CHTOP-204ENST00000368694 ZSCAN25Q6NSZ9 544 aa23.37■■□□□ 1.33
CHTOP-204ENST00000368694 MASTLQ96GX5 879 aa23.37■■□□□ 1.33
CHTOP-204ENST00000368694 FRAT2O75474 233 aaPredicted RBP23.36■■□□□ 1.33
CHTOP-204ENST00000368694 ALDH1B1P30837 517 aa23.36■■□□□ 1.33
CHTOP-204ENST00000368694 TMC4Q7Z404 712 aa23.36■■□□□ 1.33
CHTOP-204ENST00000368694 HIBADHP31937 336 aaKnown RBP23.36■■□□□ 1.33
CHTOP-204ENST00000368694 ANAPC15P60006 121 aa23.36■■□□□ 1.33
CHTOP-204ENST00000368694 ZNF622Q969S3 477 aaKnown RBP eCLIP23.36■■□□□ 1.33
CHTOP-204ENST00000368694 TBC1D2Q9BYX2 928 aa23.36■■□□□ 1.33
CHTOP-204ENST00000368694 SLC9C2Q5TAH2 1124 aa23.35■■□□□ 1.33
CHTOP-204ENST00000368694 FBXO33Q7Z6M2 555 aa23.35■■□□□ 1.33
CHTOP-204ENST00000368694 C2CD5Q86YS7 1000 aa23.35■■□□□ 1.33
CHTOP-204ENST00000368694 HSCBQ8IWL3 235 aa23.35■■□□□ 1.33
CHTOP-204ENST00000368694 SLC16A10Q8TF71 515 aa23.35■■□□□ 1.33
CHTOP-204ENST00000368694 MAST3O60307 1309 aa23.34■■□□□ 1.33
CHTOP-204ENST00000368694 UFL1O94874 794 aa23.34■■□□□ 1.33
CHTOP-204ENST00000368694 GGA1Q9UJY5 639 aa23.34■■□□□ 1.33
CHTOP-204ENST00000368694 H0YIN7 160 aa23.34■■□□□ 1.33
CHTOP-204ENST00000368694 TXNRD3Q86VQ6 643 aa23.34■■□□□ 1.33
CHTOP-204ENST00000368694 APPBP2Q92624 585 aa23.34■■□□□ 1.33
CHTOP-204ENST00000368694 MAP4K1Q92918 833 aa23.34■■□□□ 1.33
CHTOP-204ENST00000368694 DENND2AQ9ULE3 1009 aa23.34■■□□□ 1.33
CHTOP-204ENST00000368694 RBM8AQ9Y5S9 174 aaKnown RBP23.34■■□□□ 1.33
CHTOP-204ENST00000368694 PRPF40BQ6NWY9 871 aaKnown RBP23.33■■□□□ 1.33
CHTOP-204ENST00000368694 OSBP2Q969R2 916 aa23.33■■□□□ 1.33
CHTOP-204ENST00000368694 COL1A1P02452 1464 aaPredicted RBP23.33■■□□□ 1.32
CHTOP-204ENST00000368694 M0R2C6 588 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms