RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ADAMTS19Q8TE59 1207 aa8.71□□□□□ -1.02
ECHDC1-202ENST00000368289 C5P01031 1676 aa8.71□□□□□ -1.02
ECHDC1-202ENST00000368289 ITSN1Q15811 1721 aa8.71□□□□□ -1.02
ECHDC1-202ENST00000368289 NSD3Q9BZ95 1437 aa8.71□□□□□ -1.02
ECHDC1-202ENST00000368289 ARFGEF1Q9Y6D6 1849 aa8.7□□□□□ -1.02
ECHDC1-202ENST00000368289 UBR3Q6ZT12 1888 aa8.7□□□□□ -1.02
ECHDC1-202ENST00000368289 RASSF10A6NK89 507 aa8.7□□□□□ -1.02
ECHDC1-202ENST00000368289 ESPNB1AK53 854 aa8.7□□□□□ -1.02
ECHDC1-202ENST00000368289 TNFRSF10AO00220 468 aa8.7□□□□□ -1.02
ECHDC1-202ENST00000368289 NFATC2IPQ8NCF5 419 aa8.7□□□□□ -1.02
ECHDC1-202ENST00000368289 NLRP2Q9NX02 1062 aa8.7□□□□□ -1.02
ECHDC1-202ENST00000368289 TLL2Q9Y6L7 1015 aa8.7□□□□□ -1.02
ECHDC1-202ENST00000368289 TAF1LQ8IZX4 1826 aa8.7□□□□□ -1.02
ECHDC1-202ENST00000368289 LZTS3O60299 673 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-202ENST00000368289 MAP7D1Q3KQU3 841 aa8.69□□□□□ -1.02
ECHDC1-202ENST00000368289 TOR4AQ9NXH8 423 aa8.69□□□□□ -1.02
ECHDC1-202ENST00000368289 PDZRN3Q9UPQ7 1066 aa8.69□□□□□ -1.02
ECHDC1-202ENST00000368289 WDR33Q9C0J8 1336 aaKnown RBP8.69□□□□□ -1.02
ECHDC1-202ENST00000368289 ROCK2O75116 1388 aaKnown RBP8.69□□□□□ -1.02
ECHDC1-202ENST00000368289 CEP290O15078 2479 aa8.69□□□□□ -1.02
ECHDC1-202ENST00000368289 MUC3AQ02505 3323 aa8.69□□□□□ -1.02
ECHDC1-202ENST00000368289 C4BP0C0L5 1744 aa8.68□□□□□ -1.02
ECHDC1-202ENST00000368289 LTBP1Q14766 1721 aa8.68□□□□□ -1.02
ECHDC1-202ENST00000368289 DOT1LQ8TEK3 1739 aa8.68□□□□□ -1.02
ECHDC1-202ENST00000368289 CASP8AP2Q9UKL3 1982 aa8.68□□□□□ -1.02
ECHDC1-202ENST00000368289 HSPA5P11021 654 aaKnown RBP8.68□□□□□ -1.02
ECHDC1-202ENST00000368289 FSHRP23945 695 aa8.68□□□□□ -1.02
ECHDC1-202ENST00000368289 GRM5P41594 1212 aa8.68□□□□□ -1.02
ECHDC1-202ENST00000368289 MAP2K1Q02750 393 aaPredicted RBP8.68□□□□□ -1.02
ECHDC1-202ENST00000368289 LINC00116Q8NCU8 138 aa8.68□□□□□ -1.02
ECHDC1-202ENST00000368289 KTN1Q86UP2 1357 aaKnown RBP8.68□□□□□ -1.02
ECHDC1-202ENST00000368289 TMEM88BA6NKF7 163 aa8.67□□□□□ -1.02
ECHDC1-202ENST00000368289 SKIP12755 728 aa8.67□□□□□ -1.02
ECHDC1-202ENST00000368289 CHRNA5P30532 468 aa8.67□□□□□ -1.02
ECHDC1-202ENST00000368289 LAPTM4AQ15012 233 aa8.67□□□□□ -1.02
ECHDC1-202ENST00000368289 INTS6LQ5JSJ4 861 aaKnown RBP8.67□□□□□ -1.02
ECHDC1-202ENST00000368289 CCDC116Q8IYX3 515 aa8.67□□□□□ -1.02
ECHDC1-202ENST00000368289 PHTF2Q8N3S3 785 aa8.67□□□□□ -1.02
ECHDC1-202ENST00000368289 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
ECHDC1-202ENST00000368289 USP47Q96K76 1375 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 WASHC2AQ641Q2 1341 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 ATP9BO43861 1147 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 DGKZQ13574 1117 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 DEFB115Q30KQ5 88 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 DALRD3Q5D0E6 543 aaKnown RBP8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 TRIM67Q6ZTA4 783 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 CCDC82Q8N4S0 544 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 PPP1R12CQ9BZL4 782 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 PGPEP1Q9NXJ5 209 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 PIM2Q9P1W9 311 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 EMILIN1Q9Y6C2 1016 aa8.66□□□□□ -1.02
ECHDC1-202ENST00000368289 THSD7BQ9C0I4 1608 aa8.65□□□□□ -1.02
ECHDC1-202ENST00000368289 PALLDQ8WX93 1383 aa8.65□□□□□ -1.02
ECHDC1-202ENST00000368289 NFKBIEO00221 500 aa8.65□□□□□ -1.02
ECHDC1-202ENST00000368289 SSFA2P28290 1259 aa8.65□□□□□ -1.02
ECHDC1-202ENST00000368289 RAB15P59190 212 aa8.65□□□□□ -1.02
ECHDC1-202ENST00000368289 NNTQ13423 1086 aa8.65□□□□□ -1.02
ECHDC1-202ENST00000368289 PLPP7Q8NBV4 271 aa8.65□□□□□ -1.02
ECHDC1-202ENST00000368289 ANKRD24Q8TF21 1146 aa8.65□□□□□ -1.02
ECHDC1-202ENST00000368289 TFIP11Q9UBB9 837 aaKnown RBP8.65□□□□□ -1.02
ECHDC1-202ENST00000368289 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.02
ECHDC1-202ENST00000368289 PALM3A6NDB9 673 aaPredicted RBP8.64□□□□□ -1.03
ECHDC1-202ENST00000368289 J3QL48 77 aa8.64□□□□□ -1.03
ECHDC1-202ENST00000368289 LMNB1P20700 586 aa8.64□□□□□ -1.03
ECHDC1-202ENST00000368289 FMR1Q06787 632 aaKnown RBP eCLIP8.64□□□□□ -1.03
ECHDC1-202ENST00000368289 ITPK1Q13572 414 aa8.64□□□□□ -1.03
ECHDC1-202ENST00000368289 UCN2Q96RP3 112 aa8.64□□□□□ -1.03
ECHDC1-202ENST00000368289 C1orf115Q9H7X2 142 aa8.64□□□□□ -1.03
ECHDC1-202ENST00000368289 CABP1Q9NZU7 370 aa8.64□□□□□ -1.03
ECHDC1-202ENST00000368289 ERVH48-1M5A8F1 160 aa8.63□□□□□ -1.03
ECHDC1-202ENST00000368289 GFRA3O60609 400 aa8.63□□□□□ -1.03
ECHDC1-202ENST00000368289 USP4Q13107 963 aa8.63□□□□□ -1.03
ECHDC1-202ENST00000368289 EML3Q32P44 896 aa8.63□□□□□ -1.03
ECHDC1-202ENST00000368289 TBC1D9Q6ZT07 1266 aa8.63□□□□□ -1.03
ECHDC1-202ENST00000368289 PRKRIP1Q9H875 184 aaPredicted RBP8.63□□□□□ -1.03
ECHDC1-202ENST00000368289 PCDHB11Q9Y5F2 797 aa8.63□□□□□ -1.03
ECHDC1-202ENST00000368289 MEGF6O75095 1541 aa8.63□□□□□ -1.03
ECHDC1-202ENST00000368289 ADAMTS7Q9UKP4 1686 aa8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 TTC21BQ7Z4L5 1316 aa8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 PITPNM2Q9BZ72 1349 aa8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 NRG2O14511 850 aaPredicted RBP8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 AOC2O75106 756 aa8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 MYCP01106 439 aaPredicted RBP8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 GYS1P13807 737 aa8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 SMPD1P17405 629 aa8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 PPP1R26Q5T8A7 1209 aaPredicted RBP8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 PLEKHM2Q8IWE5 1019 aa8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 KCNH5Q8NCM2 988 aa8.62□□□□□ -1.03
ECHDC1-202ENST00000368289 MAP2P11137 1827 aaKnown RBP8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 ZBED9Q6R2W3 1325 aa8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 C4AP0C0L4 1744 aa8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 USP17L5A8MUK1 530 aa8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 PIK3CDO00329 1044 aa8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 DDNO94850 711 aaPredicted RBP8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 LMOD1P29536 600 aaPredicted RBP8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 DDR1Q08345 913 aa8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 CYP4F22Q6NT55 531 aa8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 TRAF7Q6Q0C0 670 aa8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 CAPNS2Q96L46 248 aa8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 CCDC85AQ96PX6 553 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms