RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 AKAP2Q9Y2D5 859 aa16.8■□□□□ 0.28
CD48-201ENST00000368045 A0A1B0GUL7 405 aa16.79■□□□□ 0.28
CD48-201ENST00000368045 CHGBP05060 677 aa16.79■□□□□ 0.28
CD48-201ENST00000368045 ADD1P35611 737 aaKnown RBP16.79■□□□□ 0.28
CD48-201ENST00000368045 EVCP57679 992 aa16.79■□□□□ 0.28
CD48-201ENST00000368045 TRIM28Q13263 835 aaKnown RBP16.79■□□□□ 0.28
CD48-201ENST00000368045 DDX11Q96FC9 970 aa16.79■□□□□ 0.28
CD48-201ENST00000368045 ISCA1Q9BUE6 129 aa16.79■□□□□ 0.28
CD48-201ENST00000368045 CTDNEP1O95476 244 aa16.79■□□□□ 0.28
CD48-201ENST00000368045 A1BGP04217 495 aa16.79■□□□□ 0.28
CD48-201ENST00000368045 APOBRQ0VD83 1088 aa16.79■□□□□ 0.28
CD48-201ENST00000368045 LUZP1Q86V48 1076 aa16.79■□□□□ 0.28
CD48-201ENST00000368045 KCNF1Q9H3M0 494 aa16.79■□□□□ 0.28
CD48-201ENST00000368045 CDC25BP30305 580 aa16.78■□□□□ 0.28
CD48-201ENST00000368045 LRRC24Q50LG9 513 aa16.78■□□□□ 0.28
CD48-201ENST00000368045 CCDC158Q5M9N0 1113 aa16.78■□□□□ 0.28
CD48-201ENST00000368045 PLA2G4DQ86XP0 818 aa16.78■□□□□ 0.28
CD48-201ENST00000368045 MPNDQ8N594 471 aa16.78■□□□□ 0.28
CD48-201ENST00000368045 LRRC2Q9BYS8 371 aa16.78■□□□□ 0.28
CD48-201ENST00000368045 FAM13BQ9NYF5 915 aa16.78■□□□□ 0.28
CD48-201ENST00000368045 PDIA3P30101 505 aaKnown RBP16.77■□□□□ 0.28
CD48-201ENST00000368045 ZNF165P49910 485 aa16.77■□□□□ 0.28
CD48-201ENST00000368045 ZNF75DP51815 510 aa16.77■□□□□ 0.28
CD48-201ENST00000368045 TOM1L2Q6ZVM7 507 aa16.77■□□□□ 0.28
CD48-201ENST00000368045 RGS22Q8NE09 1264 aa16.77■□□□□ 0.28
CD48-201ENST00000368045 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
CD48-201ENST00000368045 PLA2G12BQ9BX93 195 aa16.77■□□□□ 0.28
CD48-201ENST00000368045 ZBTB3Q9H5J0 574 aa16.77■□□□□ 0.28
CD48-201ENST00000368045 PRDM11Q9NQV5 511 aa16.77■□□□□ 0.28
CD48-201ENST00000368045 RBM10P98175 930 aaKnown RBP16.77■□□□□ 0.27
CD48-201ENST00000368045 TCIRG1Q13488 830 aa16.77■□□□□ 0.27
CD48-201ENST00000368045 CCDC57Q2TAC2 916 aa16.77■□□□□ 0.27
CD48-201ENST00000368045 CCDC73Q6ZRK6 1079 aa16.77■□□□□ 0.27
CD48-201ENST00000368045 STRCP1A6NGW2 1772 aa16.76■□□□□ 0.27
CD48-201ENST00000368045 COL5A2P05997 1499 aaPredicted RBP16.76■□□□□ 0.27
CD48-201ENST00000368045 IL2RBP14784 551 aa16.76■□□□□ 0.27
CD48-201ENST00000368045 STX1AQ16623 288 aa16.76■□□□□ 0.27
CD48-201ENST00000368045 SARM1Q6SZW1 724 aa16.76■□□□□ 0.27
CD48-201ENST00000368045 SPC24Q8NBT2 197 aa16.76■□□□□ 0.27
CD48-201ENST00000368045 TEX13AQ9BXU3 409 aaPredicted RBP16.76■□□□□ 0.27
CD48-201ENST00000368045 PYCARDQ9ULZ3 195 aa16.76■□□□□ 0.27
CD48-201ENST00000368045 CCDC9Q9Y3X0 531 aaKnown RBP16.76■□□□□ 0.27
CD48-201ENST00000368045 WDR19Q8NEZ3 1342 aa16.75■□□□□ 0.27
CD48-201ENST00000368045 PCCAP05165 728 aaPredicted RBP16.75■□□□□ 0.27
CD48-201ENST00000368045 CHAF1AQ13111 956 aaPredicted RBP16.75■□□□□ 0.27
CD48-201ENST00000368045 TTC39AQ5SRH9 613 aa16.75■□□□□ 0.27
CD48-201ENST00000368045 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
CD48-201ENST00000368045 ZNF594Q96JF6 807 aaPredicted RBP16.75■□□□□ 0.27
CD48-201ENST00000368045 M0R2C6 588 aa16.74■□□□□ 0.27
CD48-201ENST00000368045 DHX16O60231 1041 aaKnown RBP16.74■□□□□ 0.27
CD48-201ENST00000368045 FAM160A1Q05DH4 1040 aa16.74■□□□□ 0.27
CD48-201ENST00000368045 IMMTQ16891 758 aaKnown RBP16.74■□□□□ 0.27
CD48-201ENST00000368045 GORABQ5T7V8 394 aa16.74■□□□□ 0.27
CD48-201ENST00000368045 OSBP2Q969R2 916 aa16.74■□□□□ 0.27
CD48-201ENST00000368045 TRIM5Q9C035 493 aa16.74■□□□□ 0.27
CD48-201ENST00000368045 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
CD48-201ENST00000368045 VSIG10Q8N0Z9 540 aa16.74■□□□□ 0.27
CD48-201ENST00000368045 C17orf53Q8N3J3 647 aaPredicted RBP16.74■□□□□ 0.27
CD48-201ENST00000368045 PUS3Q9BZE2 481 aaKnown RBP16.74■□□□□ 0.27
CD48-201ENST00000368045 DNAJC25Q9H1X3 360 aa16.74■□□□□ 0.27
CD48-201ENST00000368045 LAMA4Q16363 1823 aa16.73■□□□□ 0.27
CD48-201ENST00000368045 KINO60870 393 aaKnown RBP16.73■□□□□ 0.27
CD48-201ENST00000368045 CSF1RP07333 972 aa16.73■□□□□ 0.27
CD48-201ENST00000368045 PTGS1P23219 599 aa16.73■□□□□ 0.27
CD48-201ENST00000368045 CCT2P78371 535 aaKnown RBP16.73■□□□□ 0.27
CD48-201ENST00000368045 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
CD48-201ENST00000368045 APPBP2Q92624 585 aa16.73■□□□□ 0.27
CD48-201ENST00000368045 XAGE2Q96GT9 111 aa16.73■□□□□ 0.27
CD48-201ENST00000368045 USP28Q96RU2 1077 aa16.73■□□□□ 0.27
CD48-201ENST00000368045 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
CD48-201ENST00000368045 A0A1W2PQ27 194 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 A0A1W2PQ64 194 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 A0A1W2PQD8 194 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 GOLGA6L19H0YKK7 550 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 IQCB1Q15051 598 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 SLFNL1Q499Z3 407 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 DRC7Q8IY82 874 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 ENGASEQ8NFI3 743 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 ANO10Q9NW15 660 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 NEMFO60524 1076 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 FKBP4Q02790 459 aaKnown RBP eCLIP16.72■□□□□ 0.27
CD48-201ENST00000368045 SNW1Q13573 536 aaKnown RBP16.72■□□□□ 0.27
CD48-201ENST00000368045 KIF6Q6ZMV9 814 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 CCDC186Q7Z3E2 898 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 ZBTB38Q8NAP3 1195 aaPredicted RBP16.72■□□□□ 0.27
CD48-201ENST00000368045 MRFAP1L1Q96HT8 127 aa16.72■□□□□ 0.27
CD48-201ENST00000368045 NCOA5Q9HCD5 579 aaKnown RBP16.72■□□□□ 0.27
CD48-201ENST00000368045 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
CD48-201ENST00000368045 IFIT5Q13325 482 aaKnown RBP16.71■□□□□ 0.27
CD48-201ENST00000368045 WASHC4Q2M389 1173 aa16.71■□□□□ 0.27
CD48-201ENST00000368045 TAF7LQ5H9L4 462 aa16.71■□□□□ 0.27
CD48-201ENST00000368045 ZSCAN25Q6NSZ9 544 aa16.71■□□□□ 0.27
CD48-201ENST00000368045 BRAPQ7Z569 592 aa16.71■□□□□ 0.27
CD48-201ENST00000368045 MB21D2Q8IYB1 491 aaPredicted RBP16.71■□□□□ 0.27
CD48-201ENST00000368045 ZNF512BQ96KM6 892 aaPredicted RBP16.71■□□□□ 0.27
CD48-201ENST00000368045 GOLPH3LQ9H4A5 285 aa16.71■□□□□ 0.27
CD48-201ENST00000368045 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
CD48-201ENST00000368045 SOS2Q07890 1332 aaPredicted RBP16.71■□□□□ 0.26
CD48-201ENST00000368045 YEATS4O95619 227 aa16.7■□□□□ 0.26
CD48-201ENST00000368045 CEBPZQ03701 1054 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms