RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 GTF2F1P35269 517 aaKnown RBP eCLIP12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 MRPS27Q92552 414 aaKnown RBP12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 PAG1Q9NWQ8 432 aa12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 CEP126Q9P2H0 1117 aa12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 ADAMTS13Q76LX8 1427 aa12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 GTF2E1P29083 439 aaPredicted RBP12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 MYL10Q9BUA6 226 aa12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 NEURL1BA8MQ27 555 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 KIF20AO95235 890 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 PDE4CQ08493 712 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 TRIM29Q14134 588 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 DPCR1Q3MIW9 517 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 TEX35Q5T0J7 233 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 ZNF790Q6PG37 636 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 CLIC4Q9Y696 253 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 C3P01024 1663 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 GPTP24298 496 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 NDUFA8P51970 172 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 ARHGAP29Q52LW3 1261 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 AIFM3Q96NN9 605 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 EPC1Q9H2F5 836 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 MTMR7Q9Y216 660 aa12.82□□□□□ -0.36
NECTIN4-201ENST00000368012 PTPRUQ92729 1446 aa12.81□□□□□ -0.36
NECTIN4-201ENST00000368012 OGFRQ9NZT2 677 aa12.81□□□□□ -0.36
NECTIN4-201ENST00000368012 PCDHA7Q9UN72 937 aa12.81□□□□□ -0.36
NECTIN4-201ENST00000368012 RESTQ13127 1097 aa12.81□□□□□ -0.36
NECTIN4-201ENST00000368012 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
NECTIN4-201ENST00000368012 OLFM4Q6UX06 510 aa12.81□□□□□ -0.36
NECTIN4-201ENST00000368012 PI16Q6UXB8 463 aa12.81□□□□□ -0.36
NECTIN4-201ENST00000368012 NUP133Q8WUM0 1156 aa12.81□□□□□ -0.36
NECTIN4-201ENST00000368012 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
NECTIN4-201ENST00000368012 TECPR2O15040 1411 aa12.81□□□□□ -0.36
NECTIN4-201ENST00000368012 SLU7O95391 586 aaKnown RBP12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 FAM160A1Q05DH4 1040 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 LRRC24Q50LG9 513 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 CCDC158Q5M9N0 1113 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 KRT222Q8N1A0 295 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 PHKBQ93100 1093 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 CCDC34Q96HJ3 373 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 SPTLC2O15270 562 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 UBASH3AP57075 661 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 PUS3Q9BZE2 481 aaKnown RBP12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 STRN4Q9NRL3 753 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 E7EWF7 191 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 PRC1O43663 620 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 A1BGP04217 495 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 CERS3Q8IU89 383 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 TDRD7Q8NHU6 1098 aaKnown RBP12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 AXIN2Q9Y2T1 843 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 NRXN3Q9Y4C0 1643 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 ITSN1Q15811 1721 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 MON2Q7Z3U7 1717 aa12.8□□□□□ -0.36
NECTIN4-201ENST00000368012 CTAGE5O15320 804 aa12.79□□□□□ -0.36
NECTIN4-201ENST00000368012 NSUN7Q8NE18 718 aaKnown RBP12.79□□□□□ -0.36
NECTIN4-201ENST00000368012 ATP1A3P13637 1013 aa12.79□□□□□ -0.36
NECTIN4-201ENST00000368012 KARSQ15046 597 aaKnown RBP12.79□□□□□ -0.36
NECTIN4-201ENST00000368012 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
NECTIN4-201ENST00000368012 PROSER2Q86WR7 435 aaPredicted RBP12.79□□□□□ -0.36
NECTIN4-201ENST00000368012 HELBQ8NG08 1087 aaPredicted RBP12.79□□□□□ -0.36
NECTIN4-201ENST00000368012 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
NECTIN4-201ENST00000368012 ZNF213O14771 459 aa12.79□□□□□ -0.36
NECTIN4-201ENST00000368012 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
NECTIN4-201ENST00000368012 TOP1P11387 765 aaKnown RBP12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 GNG11P61952 73 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 FBXO38Q6PIJ6 1188 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 CMTR1Q8N1G2 835 aaKnown RBP12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 IL17RAQ96F46 866 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 ZKSCAN3Q9BRR0 538 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 A0A1B0GUL7 405 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 TULP1O00294 542 aaPredicted RBP12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 ADD1P35611 737 aaKnown RBP12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 SYKP43405 635 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 TNNT3P45378 269 aaPredicted RBP12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 CLIC6Q96NY7 704 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 ZNF202O95125 648 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 PTPN12Q05209 780 aaKnown RBP12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 TMCO3Q6UWJ1 677 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 TTLL7Q6ZT98 887 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 KRT28Q7Z3Y7 464 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 PLA2G4DQ86XP0 818 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 ZNF397Q8NF99 534 aaPredicted RBP12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 METTL22Q9BUU2 404 aaPredicted RBP12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 NRKQ7Z2Y5 1582 aa12.78□□□□□ -0.36
NECTIN4-201ENST00000368012 HSPD1P10809 573 aaKnown RBP12.77□□□□□ -0.36
NECTIN4-201ENST00000368012 ZNF827Q17R98 1081 aa12.77□□□□□ -0.36
NECTIN4-201ENST00000368012 KMT5BQ4FZB7 885 aa12.77□□□□□ -0.36
NECTIN4-201ENST00000368012 KBTBD3Q8NAB2 608 aa12.77□□□□□ -0.36
NECTIN4-201ENST00000368012 CNNM3Q8NE01 707 aa12.77□□□□□ -0.36
NECTIN4-201ENST00000368012 CARD6Q9BX69 1037 aa12.77□□□□□ -0.36
NECTIN4-201ENST00000368012 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.77□□□□□ -0.37
NECTIN4-201ENST00000368012 DHX16O60231 1041 aaKnown RBP12.77□□□□□ -0.37
NECTIN4-201ENST00000368012 COBLO75128 1261 aa12.77□□□□□ -0.37
NECTIN4-201ENST00000368012 SNRPA1P09661 255 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms