RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 LTKP29376 864 aa18.94■□□□□ 0.62
SCAF8-201ENST00000367178 DNM1Q05193 864 aaKnown RBP18.94■□□□□ 0.62
SCAF8-201ENST00000367178 FAM114A1Q8IWE2 563 aa18.94■□□□□ 0.62
SCAF8-201ENST00000367178 TRMT1Q9NXH9 659 aaKnown RBP18.94■□□□□ 0.62
SCAF8-201ENST00000367178 APOBRQ0VD83 1088 aa18.94■□□□□ 0.62
SCAF8-201ENST00000367178 UVSSAQ2YD98 709 aa18.94■□□□□ 0.62
SCAF8-201ENST00000367178 ERMNQ8TAM6 284 aa18.94■□□□□ 0.62
SCAF8-201ENST00000367178 NAPAP54920 295 aa18.94■□□□□ 0.62
SCAF8-201ENST00000367178 ITGA6P23229 1130 aa18.93■□□□□ 0.62
SCAF8-201ENST00000367178 USP19O94966 1318 aa18.93■□□□□ 0.62
SCAF8-201ENST00000367178 ARHGEF10O15013 1369 aa18.93■□□□□ 0.62
SCAF8-201ENST00000367178 DNAI2Q9GZS0 605 aa18.93■□□□□ 0.62
SCAF8-201ENST00000367178 RMND1Q9NWS8 449 aa18.93■□□□□ 0.62
SCAF8-201ENST00000367178 CCNL1Q9UK58 526 aaPredicted RBP18.93■□□□□ 0.62
SCAF8-201ENST00000367178 MARCKSP29966 332 aaPredicted RBP18.93■□□□□ 0.62
SCAF8-201ENST00000367178 TRIM47Q96LD4 638 aa18.93■□□□□ 0.62
SCAF8-201ENST00000367178 DACT1Q9NYF0 836 aa18.93■□□□□ 0.62
SCAF8-201ENST00000367178 SLAIN2Q9P270 581 aa18.93■□□□□ 0.62
SCAF8-201ENST00000367178 RTL9Q8NET4 1388 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 TRIM75PA6NK02 468 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 TBCAO75347 108 aaKnown RBP18.92■□□□□ 0.62
SCAF8-201ENST00000367178 AFMP43652 599 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 LRSAM1Q6UWE0 723 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 PAXIP1Q6ZW49 1069 aaPredicted RBP18.92■□□□□ 0.62
SCAF8-201ENST00000367178 USP26Q9BXU7 913 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 EXOC1Q9NV70 894 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 TNNI3KQ59H18 835 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 SYCP3Q8IZU3 236 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 KLHDC4Q8TBB5 520 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 EYA3Q99504 573 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 GBP3Q9H0R5 595 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 FPGT-TNNI3KV9GXZ4 949 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 TAX1BP1Q86VP1 789 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 CNBD1Q8NA66 436 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 DDX17Q92841 729 aaKnown RBP18.92■□□□□ 0.62
SCAF8-201ENST00000367178 DBNDD2Q9BQY9 259 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 JAG2Q9Y219 1238 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 CCDC66A2RUB6 948 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 CASQ1P31415 396 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 OTUD7AQ8TE49 926 aaPredicted RBP18.92■□□□□ 0.62
SCAF8-201ENST00000367178 CCDC102AQ96A19 550 aa18.92■□□□□ 0.62
SCAF8-201ENST00000367178 ZNF496Q96IT1 587 aaPredicted RBP18.92■□□□□ 0.62
SCAF8-201ENST00000367178 RIMBP2O15034 1052 aa18.91■□□□□ 0.62
SCAF8-201ENST00000367178 N4BP3O15049 544 aa18.91■□□□□ 0.62
SCAF8-201ENST00000367178 STAT6P42226 847 aa18.91■□□□□ 0.62
SCAF8-201ENST00000367178 RUFY3Q7L099 469 aa18.91■□□□□ 0.62
SCAF8-201ENST00000367178 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.91■□□□□ 0.62
SCAF8-201ENST00000367178 CALML3P27482 149 aa18.91■□□□□ 0.62
SCAF8-201ENST00000367178 CCDC150Q8NCX0 1101 aa18.91■□□□□ 0.62
SCAF8-201ENST00000367178 HELLSQ9NRZ9 838 aa18.91■□□□□ 0.62
SCAF8-201ENST00000367178 MBD4O95243 580 aa18.91■□□□□ 0.62
SCAF8-201ENST00000367178 TNNT1P13805 278 aa18.91■□□□□ 0.62
SCAF8-201ENST00000367178 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
SCAF8-201ENST00000367178 PTPDC1A2A3K4 754 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 DNA2P51530 1060 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 C16orf45Q96MC5 204 aaPredicted RBP18.9■□□□□ 0.62
SCAF8-201ENST00000367178 DENND2AQ9ULE3 1009 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 SPTLC2O15270 562 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 PDE8AO60658 829 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 DNAJC10Q8IXB1 793 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 VEZTQ9HBM0 779 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 C6orf50Q9HD87 102 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 NEBLO76041 1014 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 PAFAH1B1P43034 410 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 RRAGBQ5VZM2 374 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 TMCO3Q6UWJ1 677 aa18.9■□□□□ 0.62
SCAF8-201ENST00000367178 INTS4Q96HW7 963 aaKnown RBP18.9■□□□□ 0.62
SCAF8-201ENST00000367178 MAGI3Q5TCQ9 1506 aa18.89■□□□□ 0.62
SCAF8-201ENST00000367178 MYCNP04198 464 aaPredicted RBP18.89■□□□□ 0.61
SCAF8-201ENST00000367178 CRACR2AQ9BSW2 395 aa18.89■□□□□ 0.61
SCAF8-201ENST00000367178 SEC24BO95487 1268 aa18.89■□□□□ 0.61
SCAF8-201ENST00000367178 PUM3Q15397 648 aaKnown RBP18.89■□□□□ 0.61
SCAF8-201ENST00000367178 USP8P40818 1118 aa18.89■□□□□ 0.61
SCAF8-201ENST00000367178 WWC3Q9ULE0 1092 aa18.89■□□□□ 0.61
SCAF8-201ENST00000367178 ZFYVE16Q7Z3T8 1539 aa18.89■□□□□ 0.61
SCAF8-201ENST00000367178 ANKRD62A6NC57 917 aa18.89■□□□□ 0.61
SCAF8-201ENST00000367178 EIF4A1P60842 406 aaKnown RBP18.89■□□□□ 0.61
SCAF8-201ENST00000367178 PDCL2Q8N4E4 241 aa18.89■□□□□ 0.61
SCAF8-201ENST00000367178 JDP2Q8WYK2 163 aa18.88■□□□□ 0.61
SCAF8-201ENST00000367178 GCKRQ14397 625 aa18.88■□□□□ 0.61
SCAF8-201ENST00000367178 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
SCAF8-201ENST00000367178 SMARCC2Q8TAQ2 1214 aa18.88■□□□□ 0.61
SCAF8-201ENST00000367178 FAM200AQ8TCP9 573 aa18.88■□□□□ 0.61
SCAF8-201ENST00000367178 ZNF594Q96JF6 807 aaPredicted RBP18.88■□□□□ 0.61
SCAF8-201ENST00000367178 YEATS2Q9ULM3 1422 aa18.88■□□□□ 0.61
SCAF8-201ENST00000367178 ZMYM4Q5VZL5 1548 aa18.88■□□□□ 0.61
SCAF8-201ENST00000367178 ANO6Q4KMQ2 910 aa18.88■□□□□ 0.61
SCAF8-201ENST00000367178 LUZP1Q86V48 1076 aa18.88■□□□□ 0.61
SCAF8-201ENST00000367178 TAF3Q5VWG9 929 aa18.87■□□□□ 0.61
SCAF8-201ENST00000367178 RRP36Q96EU6 259 aaKnown RBP18.87■□□□□ 0.61
SCAF8-201ENST00000367178 RBM17Q96I25 401 aaKnown RBP18.87■□□□□ 0.61
SCAF8-201ENST00000367178 PNMA6EA0A0J9YXQ4 647 aa18.87■□□□□ 0.61
SCAF8-201ENST00000367178 RXRAP19793 462 aa18.87■□□□□ 0.61
SCAF8-201ENST00000367178 XAGE2Q96GT9 111 aa18.87■□□□□ 0.61
SCAF8-201ENST00000367178 MPHOSPH6Q99547 160 aaKnown RBP18.87■□□□□ 0.61
SCAF8-201ENST00000367178 CCDC87Q9NVE4 849 aa18.87■□□□□ 0.61
SCAF8-201ENST00000367178 POLD1P28340 1107 aa18.87■□□□□ 0.61
SCAF8-201ENST00000367178 UBASH3AP57075 661 aa18.87■□□□□ 0.61
SCAF8-201ENST00000367178 CPA1P15085 419 aa18.86■□□□□ 0.61
SCAF8-201ENST00000367178 CFAP65Q6ZU64 1925 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms