RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 DUSP27Q5VZP5 1158 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 WHAMMQ8TF30 809 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 LCA5Q86VQ0 697 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 DACT1Q9NYF0 836 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 NDC80O14777 642 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 RARSP54136 660 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 ZKSCAN8Q15776 578 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 BMP2KLQ5H9B9 411 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 RAB11FIP4Q86YS3 637 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 CCDC63Q8NA47 563 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 NBPF6Q5VWK0 638 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 NBPF5PQ86XG9 351 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 NECAB1Q8N987 351 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 NBPF4Q96M43 638 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 EXOC6BQ9Y2D4 811 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 UTP14AQ9BVJ6 771 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 MAGEA9P43362 315 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 GRM1Q13255 1194 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 LMBRD1Q9NUN5 540 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 RAB11FIP3O75154 756 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 SSH1Q8WYL5 1049 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 BICD1Q96G01 975 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 BICC1Q9H694 974 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 RTL1A6NKG5 1358 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 F13A1P00488 732 aa12.49□□□□□ -0.41
CDC42BPA-205ENST00000366769 BAZ2BQ9UIF8 2168 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 SETDB1Q15047 1291 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 SH3GL3Q99963 347 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 FAM204AQ9H8W3 233 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 POLD1P28340 1107 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 CTNNA3Q9UI47 895 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 KCNK9Q9NPC2 374 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 TACC1O75410 805 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 PNMA6AP0CW24 399 aaPredicted RBP12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 POLE2P56282 527 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 TOM1L2Q6ZVM7 507 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 CCDC155Q8N6L0 562 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 VTI1AQ96AJ9 217 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 IQCGQ9H095 443 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 CCT2P78371 535 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 NUCB1Q02818 461 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 CETN1Q12798 172 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 IFT88Q13099 833 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 GNPTABQ3T906 1256 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 AIDAQ96BJ3 306 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 CAPS2Q9BXY5 557 aa12.48□□□□□ -0.41
CDC42BPA-205ENST00000366769 TEX11Q8IYF3 940 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 SMC1BQ8NDV3 1235 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 CHAMP1Q96JM3 812 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 TSC22D3Q99576 134 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 MYOM3Q5VTT5 1437 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 XAB2Q9HCS7 855 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 GPT2Q8TD30 523 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 OPHN1O60890 802 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 TADA2BQ86TJ2 420 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 IL1RAPL2Q9NP60 686 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 EIF3CLB5ME19 914 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 EIF3CQ99613 913 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 PFDN4Q9NQP4 134 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 CCDC40Q4G0X9 1142 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 KSR1Q8IVT5 923 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 PPFIBP2Q8ND30 876 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 NAPGQ99747 312 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 SCP2P22307 547 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 ESCO1Q5FWF5 840 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 GBP7Q8N8V2 638 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 CBX8Q9HC52 389 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 DYTNA2CJ06 578 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 ATICP31939 592 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 ZNF131P52739 623 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 TMEM266Q2M3C6 531 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 FAN1Q9Y2M0 1017 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 ENO4A6NNW6 628 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 ACTN3Q08043 901 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 SPATS2Q86XZ4 545 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 PPANQ9NQ55 473 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 ANKIB1Q9P2G1 1089 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 CEP126Q9P2H0 1117 aa12.47□□□□□ -0.41
CDC42BPA-205ENST00000366769 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 GJC1P36383 396 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 YIPF3Q9GZM5 350 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 TXNDC9O14530 226 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 FAF1Q9UNN5 650 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 ATAD2Q6PL18 1390 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 N4BP3O15049 544 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 RANBP6O60518 1105 aaKnown RBP12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 VAV2P52735 878 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 GOLGA8BA8MQT2 603 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 TMEM110-MUSTN1A8MSY1 372 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 TRIM27P14373 513 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 TMEM63CQ9P1W3 806 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 IGHMBP2P38935 993 aaKnown RBP12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 CLCN6P51797 869 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 DPH6Q7L8W6 267 aa12.46□□□□□ -0.41
CDC42BPA-205ENST00000366769 CCDC25Q86WR0 208 aa12.46□□□□□ -0.42
CDC42BPA-205ENST00000366769 RNASE9P60153 205 aaKnown RBP12.46□□□□□ -0.42
CDC42BPA-205ENST00000366769 DESI2Q9BSY9 194 aa12.46□□□□□ -0.42
CDC42BPA-205ENST00000366769 EPSTI1Q96J88 318 aa12.46□□□□□ -0.42
CDC42BPA-205ENST00000366769 TWISTNBQ3B726 338 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms