RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TYRO3Q06418 890 aa18.91■□□□□ 0.62
NID1-202ENST00000366595 TMOD3Q9NYL9 352 aa18.91■□□□□ 0.62
NID1-202ENST00000366595 RABGAP1Q9Y3P9 1069 aa18.91■□□□□ 0.62
NID1-202ENST00000366595 SH2D4BQ5SQS7 431 aa18.91■□□□□ 0.62
NID1-202ENST00000366595 ZNF354CQ86Y25 554 aa18.91■□□□□ 0.62
NID1-202ENST00000366595 AFAP1L2Q8N4X5 818 aa18.91■□□□□ 0.62
NID1-202ENST00000366595 NDUFAB1O14561 156 aa18.9■□□□□ 0.62
NID1-202ENST00000366595 ACTN4O43707 911 aaKnown RBP18.9■□□□□ 0.62
NID1-202ENST00000366595 RRS1Q15050 365 aaKnown RBP18.9■□□□□ 0.62
NID1-202ENST00000366595 CDC5LQ99459 802 aaKnown RBP18.9■□□□□ 0.62
NID1-202ENST00000366595 BUB1BO60566 1050 aaPredicted RBP18.9■□□□□ 0.62
NID1-202ENST00000366595 CCDC38Q502W7 563 aa18.9■□□□□ 0.62
NID1-202ENST00000366595 TRMT112Q9UI30 125 aaKnown RBP18.9■□□□□ 0.62
NID1-202ENST00000366595 GAS8O95995 478 aa18.9■□□□□ 0.62
NID1-202ENST00000366595 VIMP08670 466 aaKnown RBP18.9■□□□□ 0.62
NID1-202ENST00000366595 TRIM14Q14142 442 aa18.9■□□□□ 0.62
NID1-202ENST00000366595 RNF168Q8IYW5 571 aaPredicted RBP18.9■□□□□ 0.62
NID1-202ENST00000366595 GABPB2Q8TAK5 448 aaPredicted RBP18.9■□□□□ 0.62
NID1-202ENST00000366595 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.9■□□□□ 0.62
NID1-202ENST00000366595 STMN1P16949 149 aa18.9■□□□□ 0.62
NID1-202ENST00000366595 CALML3P27482 149 aa18.9■□□□□ 0.62
NID1-202ENST00000366595 PPP2R3AQ06190 1150 aa18.9■□□□□ 0.62
NID1-202ENST00000366595 HS2ST1Q7LGA3 356 aa18.9■□□□□ 0.62
NID1-202ENST00000366595 CCT6BQ92526 530 aa18.9■□□□□ 0.62
NID1-202ENST00000366595 TRPC3Q13507 836 aa18.89■□□□□ 0.62
NID1-202ENST00000366595 ATL3Q6DD88 541 aa18.89■□□□□ 0.62
NID1-202ENST00000366595 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.89■□□□□ 0.62
NID1-202ENST00000366595 ESR2Q92731 530 aa18.89■□□□□ 0.62
NID1-202ENST00000366595 BRF1Q92994 677 aa18.89■□□□□ 0.62
NID1-202ENST00000366595 NPHP3Q7Z494 1330 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 TRIM75PA6NK02 468 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 WDR78Q5VTH9 848 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 KRBA2Q6ZNG9 492 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.89■□□□□ 0.61
NID1-202ENST00000366595 CAPZA3Q96KX2 299 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 BCAP29Q9UHQ4 241 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 CNPY2Q9Y2B0 182 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 RHOXF2BP0C7M4 288 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 RTN1Q16799 776 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 VWA3BQ502W6 1294 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 RUFY4Q6ZNE9 571 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 UBLCP1Q8WVY7 318 aaPredicted RBP18.89■□□□□ 0.61
NID1-202ENST00000366595 RHOXF2Q9BQY4 288 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 TACC3Q9Y6A5 838 aa18.89■□□□□ 0.61
NID1-202ENST00000366595 SPTLC2O15270 562 aa18.88■□□□□ 0.61
NID1-202ENST00000366595 FAM13AO94988 1023 aa18.88■□□□□ 0.61
NID1-202ENST00000366595 SYT10Q6XYQ8 523 aa18.88■□□□□ 0.61
NID1-202ENST00000366595 C11orf95C9JLR9 678 aaPredicted RBP18.88■□□□□ 0.61
NID1-202ENST00000366595 CALM1P0DP23 149 aa18.88■□□□□ 0.61
NID1-202ENST00000366595 CALM2P0DP24 149 aa18.88■□□□□ 0.61
NID1-202ENST00000366595 CALM3P0DP25 149 aa18.88■□□□□ 0.61
NID1-202ENST00000366595 UBXN1Q04323 297 aa18.88■□□□□ 0.61
NID1-202ENST00000366595 TEX13AQ9BXU3 409 aaPredicted RBP18.88■□□□□ 0.61
NID1-202ENST00000366595 CNGA1P29973 690 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 SH3BP5O60239 455 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 EVCP57679 992 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 FAM69CQ0P6D2 419 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 PPP1R9BQ96SB3 815 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 VAT1LQ9HCJ6 419 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 CCDC61Q9Y6R9 512 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 SMIM23A6NLE4 172 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 TERF1P54274 439 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 MCM10Q7L590 875 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 CCDC25Q86WR0 208 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 MCUR1Q96AQ8 359 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 FLIIQ13045 1269 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 KRT79Q5XKE5 535 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 CCDC62Q6P9F0 684 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 C6orf50Q9HD87 102 aa18.87■□□□□ 0.61
NID1-202ENST00000366595 TRIM27P14373 513 aa18.86■□□□□ 0.61
NID1-202ENST00000366595 HDAC1Q13547 482 aaPredicted RBP18.86■□□□□ 0.61
NID1-202ENST00000366595 GKAP1Q5VSY0 366 aaPredicted RBP18.86■□□□□ 0.61
NID1-202ENST00000366595 TAOK1Q7L7X3 1001 aa18.86■□□□□ 0.61
NID1-202ENST00000366595 SDCCAG8Q86SQ7 713 aaPredicted RBP18.86■□□□□ 0.61
NID1-202ENST00000366595 PPP1R12CQ9BZL4 782 aa18.86■□□□□ 0.61
NID1-202ENST00000366595 ERCC5P28715 1186 aaPredicted RBP18.86■□□□□ 0.61
NID1-202ENST00000366595 LMOD1P29536 600 aaPredicted RBP18.86■□□□□ 0.61
NID1-202ENST00000366595 RPGRQ92834 1020 aaKnown RBP18.86■□□□□ 0.61
NID1-202ENST00000366595 VCX3AQ9NNX9 186 aa18.86■□□□□ 0.61
NID1-202ENST00000366595 PIK3R4Q99570 1358 aa18.86■□□□□ 0.61
NID1-202ENST00000366595 KIF21BO75037 1637 aa18.86■□□□□ 0.61
NID1-202ENST00000366595 LZTFL1Q9NQ48 299 aa18.86■□□□□ 0.61
NID1-202ENST00000366595 TTF2Q9UNY4 1162 aaKnown RBP18.86■□□□□ 0.61
NID1-202ENST00000366595 RPL13P26373 211 aaKnown RBP18.86■□□□□ 0.61
NID1-202ENST00000366595 GJC1P36383 396 aa18.86■□□□□ 0.61
NID1-202ENST00000366595 BRAPQ7Z569 592 aa18.86■□□□□ 0.61
NID1-202ENST00000366595 IL16Q14005 1332 aa18.85■□□□□ 0.61
NID1-202ENST00000366595 NUTM2AQ8IVF1 878 aaPredicted RBP18.85■□□□□ 0.61
NID1-202ENST00000366595 TMEM110-MUSTN1A8MSY1 372 aa18.85■□□□□ 0.61
NID1-202ENST00000366595 IRX4P78413 519 aa18.85■□□□□ 0.61
NID1-202ENST00000366595 KARSQ15046 597 aaKnown RBP18.85■□□□□ 0.61
NID1-202ENST00000366595 AKR1B15C9JRZ8 316 aaPredicted RBP18.85■□□□□ 0.61
NID1-202ENST00000366595 CCDC122Q5T0U0 273 aa18.85■□□□□ 0.61
NID1-202ENST00000366595 SEPT14Q6ZU15 432 aa18.85■□□□□ 0.61
NID1-202ENST00000366595 LARP6Q9BRS8 491 aaKnown RBP18.85■□□□□ 0.61
NID1-202ENST00000366595 IFIT1BQ5T764 474 aaKnown RBP18.84■□□□□ 0.61
NID1-202ENST00000366595 NAP1L4Q99733 375 aaKnown RBP18.84■□□□□ 0.61
NID1-202ENST00000366595 HSPA1LP34931 641 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 ARHGAP45Q92619 1136 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 NAPGQ99747 312 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms