RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 DDX46Q7L014 1031 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-202ENST00000366216 TSPYL6Q8N831 410 aa14.22□□□□□ -0.13
CSNK1E-202ENST00000366216 C8orf58Q8NAV2 365 aa14.22□□□□□ -0.13
CSNK1E-202ENST00000366216 IPO8O15397 1037 aaKnown RBP14.21□□□□□ -0.13
CSNK1E-202ENST00000366216 GRAPQ13588 217 aa14.21□□□□□ -0.13
CSNK1E-202ENST00000366216 MOB2Q70IA6 237 aa14.21□□□□□ -0.13
CSNK1E-202ENST00000366216 TMC4Q7Z404 712 aa14.21□□□□□ -0.13
CSNK1E-202ENST00000366216 NLRP10Q86W26 655 aa14.21□□□□□ -0.13
CSNK1E-202ENST00000366216 GRAPLQ8TC17 118 aaPredicted RBP14.21□□□□□ -0.13
CSNK1E-202ENST00000366216 FRAT1Q92837 279 aaPredicted RBP14.21□□□□□ -0.13
CSNK1E-202ENST00000366216 POLLQ9UGP5 575 aa14.21□□□□□ -0.13
CSNK1E-202ENST00000366216 TSPYL4Q9UJ04 414 aa14.21□□□□□ -0.13
CSNK1E-202ENST00000366216 ECM29Q5VYK3 1845 aa14.2□□□□□ -0.14
CSNK1E-202ENST00000366216 TM4SF4P48230 202 aa14.2□□□□□ -0.14
CSNK1E-202ENST00000366216 MRPL50Q8N5N7 158 aaKnown RBP14.2□□□□□ -0.14
CSNK1E-202ENST00000366216 CELF1Q92879 486 aaKnown RBP14.2□□□□□ -0.14
CSNK1E-202ENST00000366216 R3HDMLQ9H3Y0 253 aa14.2□□□□□ -0.14
CSNK1E-202ENST00000366216 SCAF8Q9UPN6 1271 aaKnown RBP14.2□□□□□ -0.14
CSNK1E-202ENST00000366216 CUL9Q8IWT3 2517 aa14.19□□□□□ -0.14
CSNK1E-202ENST00000366216 POTEFA5A3E0 1075 aa14.19□□□□□ -0.14
CSNK1E-202ENST00000366216 RIMBP2O15034 1052 aa14.19□□□□□ -0.14
CSNK1E-202ENST00000366216 ECE2O60344 883 aa14.19□□□□□ -0.14
CSNK1E-202ENST00000366216 FKTNO75072 461 aa14.19□□□□□ -0.14
CSNK1E-202ENST00000366216 DOK7Q18PE1 504 aa14.19□□□□□ -0.14
CSNK1E-202ENST00000366216 ATF7IPQ6VMQ6 1270 aa14.19□□□□□ -0.14
CSNK1E-202ENST00000366216 ARHGAP45Q92619 1136 aa14.19□□□□□ -0.14
CSNK1E-202ENST00000366216 SPEF2Q9C093 1822 aa14.19□□□□□ -0.14
CSNK1E-202ENST00000366216 ERBB4Q15303 1308 aa14.18□□□□□ -0.14
CSNK1E-202ENST00000366216 GPSM2P81274 684 aa14.18□□□□□ -0.14
CSNK1E-202ENST00000366216 ANGEL2Q5VTE6 544 aaKnown RBP14.18□□□□□ -0.14
CSNK1E-202ENST00000366216 INTS3Q68E01 1043 aaKnown RBP14.18□□□□□ -0.14
CSNK1E-202ENST00000366216 DZIP1LQ8IYY4 767 aaKnown RBP14.18□□□□□ -0.14
CSNK1E-202ENST00000366216 PANK1Q8TE04 598 aa14.18□□□□□ -0.14
CSNK1E-202ENST00000366216 NOB1Q9ULX3 412 aaKnown RBP14.18□□□□□ -0.14
CSNK1E-202ENST00000366216 ZNF609O15014 1411 aa14.17□□□□□ -0.14
CSNK1E-202ENST00000366216 C6orf229H3BNL8 230 aa14.17□□□□□ -0.14
CSNK1E-202ENST00000366216 VIL1P09327 827 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-202ENST00000366216 SCARF1Q14162 830 aa14.17□□□□□ -0.14
CSNK1E-202ENST00000366216 CFHR5Q9BXR6 569 aa14.17□□□□□ -0.14
CSNK1E-202ENST00000366216 NSFL1CQ9UNZ2 370 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-202ENST00000366216 A0A0C4DFX4 3053 aa14.17□□□□□ -0.14
CSNK1E-202ENST00000366216 PITPNM2Q9BZ72 1349 aa14.16□□□□□ -0.14
CSNK1E-202ENST00000366216 UBE2Q2LH0YL09 131 aa14.16□□□□□ -0.14
CSNK1E-202ENST00000366216 ELL2O00472 640 aaPredicted RBP14.16□□□□□ -0.14
CSNK1E-202ENST00000366216 RLBP1P12271 317 aa14.16□□□□□ -0.14
CSNK1E-202ENST00000366216 TRIM27P14373 513 aa14.16□□□□□ -0.14
CSNK1E-202ENST00000366216 EIF2S2P20042 333 aaKnown RBP14.16□□□□□ -0.14
CSNK1E-202ENST00000366216 ZNF280AP59817 542 aaPredicted RBP14.16□□□□□ -0.14
CSNK1E-202ENST00000366216 COPS6Q7L5N1 327 aa14.16□□□□□ -0.14
CSNK1E-202ENST00000366216 COG6Q9Y2V7 657 aa14.16□□□□□ -0.14
CSNK1E-202ENST00000366216 COL6A3P12111 3177 aa14.16□□□□□ -0.14
CSNK1E-202ENST00000366216 SREBF2Q12772 1141 aa14.15□□□□□ -0.14
CSNK1E-202ENST00000366216 TCIRG1Q13488 830 aa14.15□□□□□ -0.14
CSNK1E-202ENST00000366216 MVPQ14764 893 aaKnown RBP14.15□□□□□ -0.14
CSNK1E-202ENST00000366216 PRAMEF18Q5VWM3 479 aa14.15□□□□□ -0.14
CSNK1E-202ENST00000366216 FTSJ3Q8IY81 847 aaKnown RBP14.15□□□□□ -0.14
CSNK1E-202ENST00000366216 XAGE3Q8WTP9 111 aa14.15□□□□□ -0.14
CSNK1E-202ENST00000366216 EYA3Q99504 573 aa14.15□□□□□ -0.14
CSNK1E-202ENST00000366216 TRMT112Q9UI30 125 aaKnown RBP14.15□□□□□ -0.14
CSNK1E-202ENST00000366216 COLQQ9Y215 455 aaPredicted RBP14.15□□□□□ -0.14
CSNK1E-202ENST00000366216 MYH3P11055 1940 aa14.15□□□□□ -0.14
CSNK1E-202ENST00000366216 SH3TC1Q8TE82 1336 aa14.15□□□□□ -0.15
CSNK1E-202ENST00000366216 CACNA1FO60840 1977 aa14.14□□□□□ -0.15
CSNK1E-202ENST00000366216 MKRN3Q13064 507 aaKnown RBP14.14□□□□□ -0.15
CSNK1E-202ENST00000366216 KRT24Q2M2I5 525 aa14.14□□□□□ -0.15
CSNK1E-202ENST00000366216 TBC1D16Q8TBP0 767 aa14.14□□□□□ -0.15
CSNK1E-202ENST00000366216 NECTIN2Q92692 538 aa14.14□□□□□ -0.15
CSNK1E-202ENST00000366216 TNNQ9UQP3 1299 aa14.14□□□□□ -0.15
CSNK1E-202ENST00000366216 RANBP2P49792 3224 aaKnown RBP14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 WTIPA6NIX2 430 aaPredicted RBP14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 HOXB7P09629 217 aa14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 AIMP1Q12904 312 aaKnown RBP14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 TTLL12Q14166 644 aaPredicted RBP14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 HSP90AB3PQ58FF7 597 aa14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 CLUAP1Q96AJ1 413 aa14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 GMLQ99445 158 aa14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 CHMP4AQ9BY43 222 aa14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 API5Q9BZZ5 524 aaKnown RBP14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 TRIM17Q9Y577 477 aa14.13□□□□□ -0.15
CSNK1E-202ENST00000366216 SF3B3Q15393 1217 aaKnown RBP14.12□□□□□ -0.15
CSNK1E-202ENST00000366216 OTOP1Q7RTM1 612 aa14.12□□□□□ -0.15
CSNK1E-202ENST00000366216 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
CSNK1E-202ENST00000366216 MYOZ2Q9NPC6 264 aa14.12□□□□□ -0.15
CSNK1E-202ENST00000366216 DDX19BQ9UMR2 479 aa14.12□□□□□ -0.15
CSNK1E-202ENST00000366216 OTOFQ9HC10 1997 aa14.11□□□□□ -0.15
CSNK1E-202ENST00000366216 DLL1O00548 723 aa14.11□□□□□ -0.15
CSNK1E-202ENST00000366216 EN2P19622 333 aaPredicted RBP14.11□□□□□ -0.15
CSNK1E-202ENST00000366216 CCDC30Q5VVM6 783 aa14.11□□□□□ -0.15
CSNK1E-202ENST00000366216 RSBN1LQ6PCB5 846 aaPredicted RBP14.11□□□□□ -0.15
CSNK1E-202ENST00000366216 FAM89AQ96GI7 184 aa14.11□□□□□ -0.15
CSNK1E-202ENST00000366216 ZC3H12CQ9C0D7 883 aaKnown RBP14.11□□□□□ -0.15
CSNK1E-202ENST00000366216 PTPRCP08575 1304 aa14.11□□□□□ -0.15
CSNK1E-202ENST00000366216 G3V3G9 751 aa14.1□□□□□ -0.15
CSNK1E-202ENST00000366216 ALDH1A1P00352 501 aa14.1□□□□□ -0.15
CSNK1E-202ENST00000366216 USP17L8P0C7I0 530 aa14.1□□□□□ -0.15
CSNK1E-202ENST00000366216 CAP1Q01518 475 aa14.1□□□□□ -0.15
CSNK1E-202ENST00000366216 DCAF8Q5TAQ9 597 aa14.1□□□□□ -0.15
CSNK1E-202ENST00000366216 CENPQQ7L2Z9 268 aaPredicted RBP14.1□□□□□ -0.15
CSNK1E-202ENST00000366216 ISCA1Q9BUE6 129 aa14.1□□□□□ -0.15
CSNK1E-202ENST00000366216 CHMP4BQ9H444 224 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms