RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SMTNL1A8MU46 457 aa14.22□□□□□ -0.13
COL20A1-201ENST00000358894 SLC5A1P13866 664 aa14.22□□□□□ -0.13
COL20A1-201ENST00000358894 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
COL20A1-201ENST00000358894 MRPS27Q92552 414 aaKnown RBP14.22□□□□□ -0.13
COL20A1-201ENST00000358894 MAP4K1Q92918 833 aa14.22□□□□□ -0.13
COL20A1-201ENST00000358894 HSP90AA4PQ58FG1 418 aa14.22□□□□□ -0.13
COL20A1-201ENST00000358894 TMC6Q7Z403 805 aa14.22□□□□□ -0.13
COL20A1-201ENST00000358894 AOPEPQ8N6M6 819 aa14.22□□□□□ -0.13
COL20A1-201ENST00000358894 OVOS2A0A0J9YW53 1432 aa14.21□□□□□ -0.13
COL20A1-201ENST00000358894 OVOS2Q6IE36 1432 aa14.21□□□□□ -0.13
COL20A1-201ENST00000358894 KLHL10Q6JEL2 608 aa14.21□□□□□ -0.13
COL20A1-201ENST00000358894 ALG1Q9BT22 464 aa14.21□□□□□ -0.13
COL20A1-201ENST00000358894 TEX13AQ9BXU3 409 aaPredicted RBP14.21□□□□□ -0.13
COL20A1-201ENST00000358894 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.13
COL20A1-201ENST00000358894 PREX1Q8TCU6 1659 aa14.21□□□□□ -0.13
COL20A1-201ENST00000358894 CDC42BPGQ6DT37 1551 aa14.21□□□□□ -0.13
COL20A1-201ENST00000358894 USP31Q70CQ4 1352 aa14.21□□□□□ -0.13
COL20A1-201ENST00000358894 RANBP6O60518 1105 aaKnown RBP14.21□□□□□ -0.13
COL20A1-201ENST00000358894 A0A1B0GVL5 298 aa14.21□□□□□ -0.14
COL20A1-201ENST00000358894 CNNM3Q8NE01 707 aa14.21□□□□□ -0.14
COL20A1-201ENST00000358894 ERCC4Q92889 916 aaPredicted RBP14.21□□□□□ -0.14
COL20A1-201ENST00000358894 GTPBP4Q9BZE4 634 aaKnown RBP14.21□□□□□ -0.14
COL20A1-201ENST00000358894 DLC1Q96QB1 1528 aa14.21□□□□□ -0.14
COL20A1-201ENST00000358894 IL25Q9H293 177 aa14.2□□□□□ -0.14
COL20A1-201ENST00000358894 TTF1Q15361 905 aaPredicted RBP14.2□□□□□ -0.14
COL20A1-201ENST00000358894 WASF1Q92558 559 aa14.2□□□□□ -0.14
COL20A1-201ENST00000358894 ARGLU1Q9NWB6 273 aaPredicted RBP14.2□□□□□ -0.14
COL20A1-201ENST00000358894 ZBTB43O43298 467 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 TAF5LO75529 589 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 PRIMPOLQ96LW4 560 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 ERBB3P21860 1342 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 PCDH11XQ9BZA7 1347 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 PCDH11YQ9BZA8 1340 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 TMEM131LA2VDJ0 1609 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 SSRP1Q08945 709 aaKnown RBP14.19□□□□□ -0.14
COL20A1-201ENST00000358894 LRRC24Q50LG9 513 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 XAGE2Q96GT9 111 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 HELLSQ9NRZ9 838 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 IPO7O95373 1038 aaKnown RBP14.19□□□□□ -0.14
COL20A1-201ENST00000358894 EPHA10Q5JZY3 1008 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 TMX4Q9H1E5 349 aaPredicted RBP14.19□□□□□ -0.14
COL20A1-201ENST00000358894 IRS4O14654 1257 aaPredicted RBP14.19□□□□□ -0.14
COL20A1-201ENST00000358894 SPTLC2O15270 562 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 CAVIN2O95810 425 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 SKILP12757 684 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 DNAJC10Q8IXB1 793 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 CCDC191Q8NCU4 936 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 CBX8Q9HC52 389 aa14.19□□□□□ -0.14
COL20A1-201ENST00000358894 ADGRB2O60241 1585 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 SYKP43405 635 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 MFSD6Q6ZSS7 791 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 GTF3C6Q969F1 213 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 COPRSQ9NQ92 184 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 ADAMTS13Q76LX8 1427 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 CBFA2T2O43439 604 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 IGKV5-2P06315 115 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 SLC4A8Q2Y0W8 1093 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 KCNG4Q8TDN1 519 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 ACSBG1Q96GR2 724 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 SHPRHQ149N8 1683 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 LMOD1P29536 600 aaPredicted RBP14.18□□□□□ -0.14
COL20A1-201ENST00000358894 FILIP1LQ4L180 1135 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 KIF18AQ8NI77 898 aa14.18□□□□□ -0.14
COL20A1-201ENST00000358894 ZFP91Q96JP5 570 aaPredicted RBP14.18□□□□□ -0.14
COL20A1-201ENST00000358894 CYP2E1P05181 493 aaPredicted RBP14.17□□□□□ -0.14
COL20A1-201ENST00000358894 NOC3LQ8WTT2 800 aaKnown RBP14.17□□□□□ -0.14
COL20A1-201ENST00000358894 KIF20AO95235 890 aa14.17□□□□□ -0.14
COL20A1-201ENST00000358894 CYP21A2P08686 494 aa14.17□□□□□ -0.14
COL20A1-201ENST00000358894 DDIT3P35638 169 aa14.17□□□□□ -0.14
COL20A1-201ENST00000358894 CCDC47Q96A33 483 aaKnown RBP14.17□□□□□ -0.14
COL20A1-201ENST00000358894 NR1I2O75469 434 aa14.17□□□□□ -0.14
COL20A1-201ENST00000358894 ZAP70P43403 619 aa14.17□□□□□ -0.14
COL20A1-201ENST00000358894 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 E7EWF7 191 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 NECTIN1Q15223 517 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 NOM1Q5C9Z4 860 aaKnown RBP14.16□□□□□ -0.14
COL20A1-201ENST00000358894 CLSTN2Q9H4D0 955 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 POLR3GO15318 223 aaPredicted RBP14.16□□□□□ -0.14
COL20A1-201ENST00000358894 GPAA1O43292 621 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 TOP1P11387 765 aaKnown RBP14.16□□□□□ -0.14
COL20A1-201ENST00000358894 PPFIBP1Q86W92 1011 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 MIGA1Q8NAN2 632 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 PUS3Q9BZE2 481 aaKnown RBP14.16□□□□□ -0.14
COL20A1-201ENST00000358894 DACH1Q9UI36 760 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 ITGA6P23229 1130 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 TXLNAP40222 546 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 CLEC17AQ6ZS10 378 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 DZIP3Q86Y13 1208 aaKnown RBP14.16□□□□□ -0.14
COL20A1-201ENST00000358894 TMX1Q9H3N1 280 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 CALCOCO1Q9P1Z2 691 aa14.16□□□□□ -0.14
COL20A1-201ENST00000358894 B4E1Z4 1266 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 UQCRFS1P1P0C7P4 283 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 GTF2F1P35269 517 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL20A1-201ENST00000358894 PTPN12Q05209 780 aaKnown RBP14.15□□□□□ -0.14
COL20A1-201ENST00000358894 SLFNL1Q499Z3 407 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 CAVIN4Q5BKX8 364 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 HAUS7Q99871 368 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 USP32Q8NFA0 1604 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 ADCY9O60503 1353 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 CCP110O43303 1012 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms