RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 MTRF1LQ9UGC7 380 aaKnown RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 TNNI2P48788 182 aa10.02□□□□□ -0.8
CTNND1-201ENST00000358694 WDR44Q5JSH3 913 aa10.02□□□□□ -0.8
CTNND1-201ENST00000358694 STMN2Q93045 179 aa10.02□□□□□ -0.8
CTNND1-201ENST00000358694 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.02□□□□□ -0.85e-6■■■□□ 17.3
CTNND1-201ENST00000358694 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-201ENST00000358694 CEP57Q86XR8 500 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 PPFIBP2Q8ND30 876 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 RRP36Q96EU6 259 aaKnown RBP10.02□□□□□ -0.81
CTNND1-201ENST00000358694 PPANQ9NQ55 473 aaKnown RBP10.02□□□□□ -0.81
CTNND1-201ENST00000358694 PKD2L1Q9P0L9 805 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 ZFYP08048 801 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-201ENST00000358694 CALCOCO2Q13137 446 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 AFAP1L2Q8N4X5 818 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 NSMCE1Q8WV22 266 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 FNBP1Q96RU3 617 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 GINS2Q9Y248 185 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 MROH2BQ7Z745 1585 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 ZBTB43O43298 467 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 ZNF165P49910 485 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 RTN1Q16799 776 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 CPLX4Q7Z7G2 160 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 LEO1Q8WVC0 666 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-201ENST00000358694 NUF2Q9BZD4 464 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 PPME1Q9Y570 386 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 GJA3Q9Y6H8 435 aa10.02□□□□□ -0.81
CTNND1-201ENST00000358694 NEK11Q8NG66 645 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 DACT3Q96B18 629 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-201ENST00000358694 TRIM6Q9C030 488 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-201ENST00000358694 GDPD2Q9HCC8 539 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 SLC52A1Q9NWF4 448 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 MTUS1Q9ULD2 1270 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 ATAD2Q6PL18 1390 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 STK10O94804 968 aaKnown RBP10.01□□□□□ -0.81
CTNND1-201ENST00000358694 SPAG1Q07617 926 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 NAA16Q6N069 864 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-201ENST00000358694 ADCY5O95622 1261 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 CCT6AP40227 531 aaKnown RBP10.01□□□□□ -0.81
CTNND1-201ENST00000358694 SEL1L2Q5TEA6 688 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 IFT81Q8WYA0 676 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 SAMD15Q9P1V8 674 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 MCM7P33993 719 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 TMPOP42166 694 aaKnown RBP10.01□□□□□ -0.81
CTNND1-201ENST00000358694 TMTC2Q8N394 836 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 CAPZA3Q96KX2 299 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 ALG1Q9BT22 464 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 ITIH3Q06033 890 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 CCDC125Q86Z20 511 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 GBP7Q8N8V2 638 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-201ENST00000358694 MRRFQ96E11 262 aaKnown RBP10.01□□□□□ -0.81
CTNND1-201ENST00000358694 NLRP3Q96P20 1036 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 ECHDC1Q9NTX5 307 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 SEPT10Q9P0V9 454 aa10.01□□□□□ -0.81
CTNND1-201ENST00000358694 FOXO3O43524 673 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 ARID4AP29374 1257 aaPredicted RBP10□□□□□ -0.81
CTNND1-201ENST00000358694 RAPGEF1Q13905 1077 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 MCM6Q14566 821 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 UBE3BQ7Z3V4 1068 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 ACSBG1Q96GR2 724 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 CCDC171Q6TFL3 1326 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 XRCC6P12956 609 aaKnown RBP eCLIP10□□□□□ -0.812e-8■□□□□ 8.5
CTNND1-201ENST00000358694 ATP6V1AP38606 617 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 SDCCAG8Q86SQ7 713 aaPredicted RBP10□□□□□ -0.81
CTNND1-201ENST00000358694 JARID2Q92833 1246 aaPredicted RBP10□□□□□ -0.81
CTNND1-201ENST00000358694 CNNM2Q9H8M5 875 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 HAUS2Q9NVX0 235 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 KRT83P78385 493 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 DCAF17Q5H9S7 520 aaPredicted RBP10□□□□□ -0.81
CTNND1-201ENST00000358694 CEP85LQ5SZL2 805 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 CCDC42Q96M95 316 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 ZC3H12CQ9C0D7 883 aaKnown RBP10□□□□□ -0.81
CTNND1-201ENST00000358694 RIMBP2O15034 1052 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 DIXDC1Q155Q3 683 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 NBPF1Q3BBV0 1214 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 INTS8Q75QN2 995 aaKnown RBP10□□□□□ -0.81
CTNND1-201ENST00000358694 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10□□□□□ -0.81
CTNND1-201ENST00000358694 IVNS1ABPQ9Y6Y0 642 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 TRPC3Q13507 836 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 TMOD4Q9NZQ9 345 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 CCDC61Q9Y6R9 512 aa10□□□□□ -0.81
CTNND1-201ENST00000358694 VIMP08670 466 aaKnown RBP9.99□□□□□ -0.81
CTNND1-201ENST00000358694 IFNL2Q8IZJ0 200 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 GPR161Q8N6U8 529 aaKnown RBP9.99□□□□□ -0.81
CTNND1-201ENST00000358694 DHX58Q96C10 678 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 NKIRAS1Q9NYS0 192 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 CADPSQ9ULU8 1353 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 NEDD9Q14511 834 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 KIFAP3Q92845 792 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 GTF3C6Q969F1 213 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 TFCP2L1Q9NZI6 479 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 SWAP70Q9UH65 585 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 PRDM2Q13029 1718 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 CTAGE9A4FU28 777 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 KRT86O43790 486 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 MAP7Q14244 749 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 CSRNP2Q9H175 543 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 VCX3BQ9H321 246 aa9.99□□□□□ -0.81
CTNND1-201ENST00000358694 PICK1Q9NRD5 415 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms