RNA–Protein interactions for RNA: ENST00000358598.6

PRKAR1A-201, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-201ENST00000358598 RXRAP19793 462 aa12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 GIGYF2Q6Y7W6 1299 aaKnown RBP12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 MAP3K15Q6ZN16 1313 aa12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 POLR3DP05423 398 aaPredicted RBP12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 AIDAQ96BJ3 306 aa12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 DDB1Q16531 1140 aa12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 CCDC73Q6ZRK6 1079 aa12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 ARID3AQ99856 593 aa12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 ISCA1Q9BUE6 129 aa12.9□□□□□ -0.34
PRKAR1A-201ENST00000358598 DCCP43146 1447 aa12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 GPAA1O43292 621 aa12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 CFAP45Q9UL16 551 aa12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 PRC1O43663 620 aa12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 FTOQ9C0B1 505 aaKnown RBP eCLIP12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 ABCF2Q9UG63 623 aa12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 FGAP02671 866 aa12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 CTSWP56202 376 aa12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 LEO1Q8WVC0 666 aaPredicted RBP12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 PUS7LQ9H0K6 701 aaKnown RBP12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 TTC12Q9H892 705 aaPredicted RBP12.89□□□□□ -0.35
PRKAR1A-201ENST00000358598 CCDC82Q8N4S0 544 aa12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 KCNB2Q92953 911 aa12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 DSCC1Q9BVC3 393 aa12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 CIAO1O76071 339 aa12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 KCNQ4P56696 695 aa12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 VPS37DQ86XT2 251 aa12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 TTLL11Q8NHH1 800 aa12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 SDF4Q9BRK5 362 aa12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 COL15A1P39059 1388 aa12.88□□□□□ -0.35
PRKAR1A-201ENST00000358598 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 HMGN5P82970 282 aaKnown RBP12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 IL17RAQ96F46 866 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 TRIM5Q9C035 493 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 ZNF142P52746 1687 aaPredicted RBP12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 MCM5P33992 734 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 PHKA1P46020 1223 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 ZSCAN25Q6NSZ9 544 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 SYNE3Q6ZMZ3 975 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 MICU3Q86XE3 530 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 LRP2BPQ9P2M1 347 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 ORC3Q9UBD5 711 aaPredicted RBP12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 SH3TC1Q8TE82 1336 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 COL5A2P05997 1499 aaPredicted RBP12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 BECN2A8MW95 431 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 GOLGA6L19H0YKK7 550 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 STK38Q15208 465 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 NCOA7Q8NI08 942 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 APPBP2Q92624 585 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 C8orf76Q96K31 380 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 KIF1AQ12756 1690 aa12.87□□□□□ -0.35
PRKAR1A-201ENST00000358598 DHX16O60231 1041 aaKnown RBP12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 LUZP1Q86V48 1076 aa12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 ZKSCAN5Q9Y2L8 839 aa12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 CPLX2Q6PUV4 134 aaKnown RBP12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 ZNF396Q96N95 335 aaPredicted RBP12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 PDE8AO60658 829 aa12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 IGHMBP2P38935 993 aaKnown RBP12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 ANO6Q4KMQ2 910 aa12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 TMEM87AQ8NBN3 555 aa12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 SEC31BQ9NQW1 1179 aa12.86□□□□□ -0.35
PRKAR1A-201ENST00000358598 NR1I2O75469 434 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 CYP19A1P11511 503 aaPredicted RBP12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 MCAMP43121 646 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 TDO2P48775 406 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 TYRO3Q06418 890 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 NAPBQ9H115 298 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 SLC5A1P13866 664 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 ATP2B1P20020 1258 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 PDIA3P30101 505 aaKnown RBP12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 CCDC102BQ68D86 513 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 CCAR1Q8IX12 1150 aaKnown RBP12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 NSUN7Q8NE18 718 aaKnown RBP12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 ZSCAN16Q9H4T2 348 aaPredicted RBP12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 NOL7Q9UMY1 257 aaKnown RBP12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 PFKFB2O60825 505 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 TSGA10IPQ3SY00 556 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 C17orf53Q8N3J3 647 aaPredicted RBP12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 MAGEB6Q8N7X4 407 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 MIGA1Q8NAN2 632 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 ERCC4Q92889 916 aaPredicted RBP12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 ZNF532Q9HCE3 1301 aa12.85□□□□□ -0.35
PRKAR1A-201ENST00000358598 MAP3K12Q12852 859 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 GJB4Q9NTQ9 266 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 GOLGA6L6A8MZA4 724 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 B4E1Z4 1266 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 PDE8BO95263 885 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms