RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 FAM227BQ96M60 508 aa20.65■□□□□ 0.9
TPM1-205ENST00000357980 IPO9Q96P70 1041 aaKnown RBP20.65■□□□□ 0.9
TPM1-205ENST00000357980 CRAMP1Q96RY5 1269 aa20.65■□□□□ 0.9
TPM1-205ENST00000357980 ANTXR1Q9H6X2 564 aa20.65■□□□□ 0.9
TPM1-205ENST00000357980 SNRKQ9NRH2 765 aa20.65■□□□□ 0.9
TPM1-205ENST00000357980 MYO5AQ9Y4I1 1855 aaKnown RBP20.65■□□□□ 0.9
TPM1-205ENST00000357980 FKBP4Q02790 459 aaKnown RBP eCLIP20.64■□□□□ 0.9
TPM1-205ENST00000357980 KIF2CQ99661 725 aa20.64■□□□□ 0.9
TPM1-205ENST00000357980 ZNF804BA4D1E1 1349 aa20.64■□□□□ 0.89
TPM1-205ENST00000357980 RAD50Q92878 1312 aa20.64■□□□□ 0.89
TPM1-205ENST00000357980 A0A0D9SFI3 127 aa20.64■□□□□ 0.89
TPM1-205ENST00000357980 EPB41L2O43491 1005 aaKnown RBP20.64■□□□□ 0.89
TPM1-205ENST00000357980 ZAP70P43403 619 aa20.64■□□□□ 0.89
TPM1-205ENST00000357980 ANO2Q9NQ90 1003 aa20.64■□□□□ 0.89
TPM1-205ENST00000357980 DOCK2Q92608 1830 aa20.64■□□□□ 0.89
TPM1-205ENST00000357980 LTBP1Q14766 1721 aa20.63■□□□□ 0.89
TPM1-205ENST00000357980 MED23Q9ULK4 1368 aa20.63■□□□□ 0.89
TPM1-205ENST00000357980 SRGNP10124 158 aa20.63■□□□□ 0.89
TPM1-205ENST00000357980 BCAMP50895 628 aa20.63■□□□□ 0.89
TPM1-205ENST00000357980 SLC51AQ86UW1 340 aa20.63■□□□□ 0.89
TPM1-205ENST00000357980 PDE6BP35913 854 aa20.62■□□□□ 0.89
TPM1-205ENST00000357980 DDRGK1Q96HY6 314 aa20.62■□□□□ 0.89
TPM1-205ENST00000357980 BBOX1O75936 387 aa20.62■□□□□ 0.89
TPM1-205ENST00000357980 RASGRF1Q13972 1273 aa20.62■□□□□ 0.89
TPM1-205ENST00000357980 LSG1Q9H089 658 aaKnown RBP20.62■□□□□ 0.89
TPM1-205ENST00000357980 IRS2Q9Y4H2 1338 aa20.61■□□□□ 0.89
TPM1-205ENST00000357980 MYH13Q9UKX3 1938 aa20.61■□□□□ 0.89
TPM1-205ENST00000357980 CHGBP05060 677 aa20.61■□□□□ 0.89
TPM1-205ENST00000357980 HMG20BQ9P0W2 317 aa20.61■□□□□ 0.89
TPM1-205ENST00000357980 CYP2E1P05181 493 aaPredicted RBP20.6■□□□□ 0.89
TPM1-205ENST00000357980 NPR1P16066 1061 aa20.6■□□□□ 0.89
TPM1-205ENST00000357980 SLC16A10Q8TF71 515 aa20.6■□□□□ 0.89
TPM1-205ENST00000357980 XDHP47989 1333 aa20.6■□□□□ 0.89
TPM1-205ENST00000357980 KLRK1P26718 216 aa20.6■□□□□ 0.89
TPM1-205ENST00000357980 GYG1P46976 350 aa20.6■□□□□ 0.89
TPM1-205ENST00000357980 KCNJ4P48050 445 aa20.6■□□□□ 0.89
TPM1-205ENST00000357980 SPATA5Q8NB90 893 aa20.6■□□□□ 0.89
TPM1-205ENST00000357980 CACNA1SQ13698 1873 aa20.59■□□□□ 0.89
TPM1-205ENST00000357980 TMC4Q7Z404 712 aa20.59■□□□□ 0.89
TPM1-205ENST00000357980 FBXO33Q7Z6M2 555 aa20.59■□□□□ 0.89
TPM1-205ENST00000357980 FAM84BQ96KN1 310 aaPredicted RBP20.59■□□□□ 0.89
TPM1-205ENST00000357980 TTF1Q15361 905 aaPredicted RBP20.58■□□□□ 0.89
TPM1-205ENST00000357980 ZNF589Q86UQ0 364 aaPredicted RBP20.58■□□□□ 0.89
TPM1-205ENST00000357980 ANKIB1Q9P2G1 1089 aa20.58■□□□□ 0.89
TPM1-205ENST00000357980 LEMD3Q9Y2U8 911 aa20.58■□□□□ 0.89
TPM1-205ENST00000357980 COL1A1P02452 1464 aaPredicted RBP20.58■□□□□ 0.89
TPM1-205ENST00000357980 RNF113AO15541 343 aaKnown RBP20.57■□□□□ 0.88
TPM1-205ENST00000357980 CAVIN4Q5BKX8 364 aa20.57■□□□□ 0.88
TPM1-205ENST00000357980 ZMYM1Q5SVZ6 1142 aa20.57■□□□□ 0.88
TPM1-205ENST00000357980 KIAA1211Q6ZU35 1233 aa20.57■□□□□ 0.88
TPM1-205ENST00000357980 PIH1D3Q9NQM4 214 aaKnown RBP20.57■□□□□ 0.88
TPM1-205ENST00000357980 CCDC171Q6TFL3 1326 aa20.57■□□□□ 0.88
TPM1-205ENST00000357980 GPSM2P81274 684 aa20.57■□□□□ 0.88
TPM1-205ENST00000357980 PTH1RQ03431 593 aa20.57■□□□□ 0.88
TPM1-205ENST00000357980 MASTLQ96GX5 879 aa20.57■□□□□ 0.88
TPM1-205ENST00000357980 C10orf71Q711Q0 1435 aa20.57■□□□□ 0.88
TPM1-205ENST00000357980 PPEF1O14829 653 aaPredicted RBP20.56■□□□□ 0.88
TPM1-205ENST00000357980 ZFYP08048 801 aaPredicted RBP20.56■□□□□ 0.88
TPM1-205ENST00000357980 LRRFIP1Q32MZ4 808 aaKnown RBP20.56■□□□□ 0.88
TPM1-205ENST00000357980 SLFNL1Q499Z3 407 aa20.56■□□□□ 0.88
TPM1-205ENST00000357980 MCMDC2Q4G0Z9 681 aa20.56■□□□□ 0.88
TPM1-205ENST00000357980 UPF1Q92900 1129 aaKnown RBP eCLIP20.56■□□□□ 0.88
TPM1-205ENST00000357980 IL17RAQ96F46 866 aa20.56■□□□□ 0.88
TPM1-205ENST00000357980 SEC62Q99442 399 aaKnown RBP20.56■□□□□ 0.88
TPM1-205ENST00000357980 HELLSQ9NRZ9 838 aa20.56■□□□□ 0.88
TPM1-205ENST00000357980 PODXL2Q9NZ53 605 aa20.56■□□□□ 0.88
TPM1-205ENST00000357980 DLEC1Q9Y238 1755 aa20.56■□□□□ 0.88
TPM1-205ENST00000357980 ZBTB22O15209 634 aa20.55■□□□□ 0.88
TPM1-205ENST00000357980 ALDH1B1P30837 517 aa20.55■□□□□ 0.88
TPM1-205ENST00000357980 HSPA4P34932 840 aa20.55■□□□□ 0.88
TPM1-205ENST00000357980 TXNRD3Q86VQ6 643 aa20.55■□□□□ 0.88
TPM1-205ENST00000357980 GNL3LQ9NVN8 582 aaKnown RBP20.55■□□□□ 0.88
TPM1-205ENST00000357980 KIF13BQ9NQT8 1826 aa20.55■□□□□ 0.88
TPM1-205ENST00000357980 MCCP23508 829 aa20.55■□□□□ 0.88
TPM1-205ENST00000357980 C15orf52Q6ZUT6 534 aaKnown RBP20.55■□□□□ 0.88
TPM1-205ENST00000357980 SP8Q8IXZ3 490 aa20.55■□□□□ 0.88
TPM1-205ENST00000357980 ATP6V0A2Q9Y487 856 aa20.55■□□□□ 0.88
TPM1-205ENST00000357980 ANAPC15P60006 121 aa20.54■□□□□ 0.88
TPM1-205ENST00000357980 VPS37DQ86XT2 251 aa20.54■□□□□ 0.88
TPM1-205ENST00000357980 C2CD5Q86YS7 1000 aa20.54■□□□□ 0.88
TPM1-205ENST00000357980 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.54■□□□□ 0.88
TPM1-205ENST00000357980 PALD1Q9ULE6 856 aa20.54■□□□□ 0.88
TPM1-205ENST00000357980 DUOX1Q9NRD9 1551 aa20.54■□□□□ 0.88
TPM1-205ENST00000357980 SEMA3EO15041 775 aa20.53■□□□□ 0.88
TPM1-205ENST00000357980 HIBADHP31937 336 aaKnown RBP20.53■□□□□ 0.88
TPM1-205ENST00000357980 STYK1Q6J9G0 422 aa20.53■□□□□ 0.88
TPM1-205ENST00000357980 MAP4K1Q92918 833 aa20.53■□□□□ 0.88
TPM1-205ENST00000357980 NSFL1CQ9UNZ2 370 aaKnown RBP20.53■□□□□ 0.88
TPM1-205ENST00000357980 IQSEC3Q9UPP2 1182 aaPredicted RBP20.53■□□□□ 0.88
TPM1-205ENST00000357980 MAST3O60307 1309 aa20.53■□□□□ 0.88
TPM1-205ENST00000357980 PDS5AQ29RF7 1337 aaKnown RBP20.53■□□□□ 0.88
TPM1-205ENST00000357980 SLX4Q8IY92 1834 aa20.53■□□□□ 0.88
TPM1-205ENST00000357980 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
TPM1-205ENST00000357980 ADD2P35612 726 aa20.53■□□□□ 0.88
TPM1-205ENST00000357980 CCDC129Q6ZRS4 1044 aa20.53■□□□□ 0.88
TPM1-205ENST00000357980 OSBP2Q969R2 916 aa20.53■□□□□ 0.88
TPM1-205ENST00000357980 H0YIN7 160 aa20.52■□□□□ 0.88
TPM1-205ENST00000357980 IDH1O75874 414 aaKnown RBP20.52■□□□□ 0.88
TPM1-205ENST00000357980 UFL1O94874 794 aa20.52■□□□□ 0.88
TPM1-205ENST00000357980 ZSCAN25Q6NSZ9 544 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms