RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 STAT6P42226 847 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 STAMBPO95630 424 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 CAVIN2O95810 425 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 PABPC4Q13310 644 aaKnown RBP eCLIP12.88□□□□□ -0.35
FN1-204ENST00000356005 MAP9Q49MG5 647 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 CDAN1Q8IWY9 1227 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 ORC3Q9UBD5 711 aaPredicted RBP12.88□□□□□ -0.35
FN1-204ENST00000356005 CSADQ9Y600 493 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 ERVV-2B6SEH9 535 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 CCDC183Q5T5S1 534 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 PLBD2Q8NHP8 589 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 H0YHG0 523 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 PRC1O43663 620 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 CCDC144CPQ8IYA2 1237 aa12.88□□□□□ -0.35
FN1-204ENST00000356005 IDEP14735 1019 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 YEATS4O95619 227 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 RHPN1Q8TCX5 695 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 KIF5CO60282 957 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 OTUD7BQ6GQQ9 843 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 FAM196AQ6ZSG2 479 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 ZNF408Q9H9D4 720 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 HOXB7P09629 217 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 NUP88Q99567 741 aaPredicted RBP12.87□□□□□ -0.35
FN1-204ENST00000356005 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 RFX1P22670 979 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 USP8P40818 1118 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 HAND2P61296 217 aa12.87□□□□□ -0.35
FN1-204ENST00000356005 LPXNO60711 386 aa12.86□□□□□ -0.35
FN1-204ENST00000356005 TEX11Q8IYF3 940 aa12.86□□□□□ -0.35
FN1-204ENST00000356005 HACE1Q8IYU2 909 aa12.86□□□□□ -0.35
FN1-204ENST00000356005 DDX21Q9NR30 783 aaKnown RBP eCLIP12.86□□□□□ -0.35
FN1-204ENST00000356005 GSTTP1A0A1W2PQM5 241 aa12.86□□□□□ -0.35
FN1-204ENST00000356005 TSNARE1Q96NA8 513 aa12.86□□□□□ -0.35
FN1-204ENST00000356005 RAB3GAP1Q15042 981 aa12.86□□□□□ -0.35
FN1-204ENST00000356005 LEKR1Q6ZMV7 388 aa12.86□□□□□ -0.35
FN1-204ENST00000356005 HIBADHP31937 336 aaKnown RBP12.86□□□□□ -0.35
FN1-204ENST00000356005 ALS2CR12Q96Q35 445 aa12.86□□□□□ -0.35
FN1-204ENST00000356005 NAA15Q9BXJ9 866 aaKnown RBP12.86□□□□□ -0.35
FN1-204ENST00000356005 SREK1Q8WXA9 508 aaKnown RBP12.86□□□□□ -0.35
FN1-204ENST00000356005 GBP3Q9H0R5 595 aa12.86□□□□□ -0.35
FN1-204ENST00000356005 AS3MTQ9HBK9 375 aa12.86□□□□□ -0.35
FN1-204ENST00000356005 TOP1P11387 765 aaKnown RBP12.85□□□□□ -0.35
FN1-204ENST00000356005 TDRD12Q587J7 1177 aaKnown RBP12.85□□□□□ -0.35
FN1-204ENST00000356005 TAX1BP1Q86VP1 789 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 SFPQP23246 707 aaKnown RBP eCLIP12.85□□□□□ -0.35
FN1-204ENST00000356005 PAFAH1B1P43034 410 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 QTRT2Q9H974 415 aaKnown RBP12.85□□□□□ -0.35
FN1-204ENST00000356005 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.85□□□□□ -0.35
FN1-204ENST00000356005 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 CTNNBL1Q8WYA6 563 aaPredicted RBP12.85□□□□□ -0.35
FN1-204ENST00000356005 CENPHQ9H3R5 247 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 PARP1P09874 1014 aaKnown RBP12.85□□□□□ -0.35
FN1-204ENST00000356005 DDX19AQ9NUU7 478 aaKnown RBP12.85□□□□□ -0.35
FN1-204ENST00000356005 SPHKAPQ2M3C7 1700 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 GCOM1H8Y6P7 765 aaPredicted RBP12.85□□□□□ -0.35
FN1-204ENST00000356005 MYZAPP0CAP1 466 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 GUCY1B3Q02153 619 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 M0QZ92 97 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 NOP56O00567 594 aaKnown RBP12.85□□□□□ -0.35
FN1-204ENST00000356005 LMAN1P49257 510 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 CCDC102BQ68D86 513 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 KCNG4Q8TDN1 519 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 HAUS2Q9NVX0 235 aa12.85□□□□□ -0.35
FN1-204ENST00000356005 PRPHP41219 470 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 PNMA2Q9UL42 364 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 TMEM2Q9UHN6 1383 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 SLC8A3P57103 927 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 POLR3AO14802 1390 aaPredicted RBP12.84□□□□□ -0.35
FN1-204ENST00000356005 EAPPQ56P03 285 aaPredicted RBP12.84□□□□□ -0.35
FN1-204ENST00000356005 MROH5Q6ZUA9 1318 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
FN1-204ENST00000356005 ABCA8O94911 1581 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 A0A1W2PP64 1363 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 BACH1O14867 736 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 CNKSR1Q969H4 720 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 NLRP1Q9C000 1473 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 FAM13AO94988 1023 aa12.84□□□□□ -0.35
FN1-204ENST00000356005 IQSEC3Q9UPP2 1182 aaPredicted RBP12.84□□□□□ -0.35
FN1-204ENST00000356005 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.35
FN1-204ENST00000356005 CTAGE1Q96RT6 745 aa12.83□□□□□ -0.35
FN1-204ENST00000356005 DISP1Q96F81 1524 aa12.83□□□□□ -0.35
FN1-204ENST00000356005 MRPS9P82933 396 aaKnown RBP12.83□□□□□ -0.36
FN1-204ENST00000356005 HS2ST1Q7LGA3 356 aa12.83□□□□□ -0.36
FN1-204ENST00000356005 SMCR8Q8TEV9 937 aaPredicted RBP12.83□□□□□ -0.36
FN1-204ENST00000356005 SLC52A2Q9HAB3 445 aa12.83□□□□□ -0.36
FN1-204ENST00000356005 KRT2P35908 639 aa12.83□□□□□ -0.36
FN1-204ENST00000356005 USP48Q86UV5 1035 aa12.83□□□□□ -0.36
FN1-204ENST00000356005 ALG1Q9BT22 464 aa12.83□□□□□ -0.36
FN1-204ENST00000356005 ZNF354CQ86Y25 554 aa12.83□□□□□ -0.36
FN1-204ENST00000356005 FAM177A1Q8N128 213 aaPredicted RBP12.83□□□□□ -0.36
FN1-204ENST00000356005 FSIP1Q8NA03 581 aa12.83□□□□□ -0.36
FN1-204ENST00000356005 BACH2Q9BYV9 841 aa12.83□□□□□ -0.36
FN1-204ENST00000356005 KCNG1Q9UIX4 513 aa12.83□□□□□ -0.36
FN1-204ENST00000356005 KLF18A0A0U1RQI7 1052 aa12.83□□□□□ -0.36
FN1-204ENST00000356005 ATP8B2P98198 1209 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms