RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 RPS8P62241 208 aaKnown RBP27.46■■□□□ 1.99
SCAMP3-202ENST00000355379 NPHP1O15259 732 aa27.45■■□□□ 1.98
SCAMP3-202ENST00000355379 UBE4AQ14139 1066 aa27.45■■□□□ 1.98
SCAMP3-202ENST00000355379 FLAD1Q8NFF5 587 aa27.45■■□□□ 1.98
SCAMP3-202ENST00000355379 CELF1Q92879 486 aaKnown RBP27.45■■□□□ 1.98
SCAMP3-202ENST00000355379 SLKQ9H2G2 1235 aaPredicted RBP27.45■■□□□ 1.98
SCAMP3-202ENST00000355379 DOCK2Q92608 1830 aa27.44■■□□□ 1.98
SCAMP3-202ENST00000355379 TM6SF1Q9BZW5 370 aa27.44■■□□□ 1.98
SCAMP3-202ENST00000355379 MINPP1Q9UNW1 487 aa27.44■■□□□ 1.98
SCAMP3-202ENST00000355379 PRR5LQ6MZQ0 368 aa27.43■■□□□ 1.98
SCAMP3-202ENST00000355379 RASEFQ8IZ41 740 aa27.43■■□□□ 1.98
SCAMP3-202ENST00000355379 SERPINB2P05120 415 aa27.42■■□□□ 1.98
SCAMP3-202ENST00000355379 KCNJ4P48050 445 aa27.42■■□□□ 1.98
SCAMP3-202ENST00000355379 RNF20Q5VTR2 975 aa27.42■■□□□ 1.98
SCAMP3-202ENST00000355379 CREB3L3Q68CJ9 461 aa27.42■■□□□ 1.98
SCAMP3-202ENST00000355379 ZSCAN25Q6NSZ9 544 aa27.42■■□□□ 1.98
SCAMP3-202ENST00000355379 PRPF40BQ6NWY9 871 aaKnown RBP27.42■■□□□ 1.98
SCAMP3-202ENST00000355379 ZKSCAN1P17029 563 aaPredicted RBP27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 ZNF827Q17R98 1081 aa27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 SEC62Q99442 399 aaKnown RBP27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 ANKRD2Q9GZV1 360 aa27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 TFCP2L1Q9NZI6 479 aa27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 HMG20BQ9P0W2 317 aa27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 DDIT3P35638 169 aa27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 ST5P78524 1137 aa27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 CCDC24Q8N4L8 307 aa27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 SPRYD3Q8NCJ5 442 aa27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 CHMP5Q9NZZ3 219 aa27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 U3KPZ7 1027 aaPredicted RBP27.41■■□□□ 1.98
SCAMP3-202ENST00000355379 MYO5AQ9Y4I1 1855 aaKnown RBP27.4■■□□□ 1.98
SCAMP3-202ENST00000355379 SLC27A2O14975 620 aa27.4■■□□□ 1.98
SCAMP3-202ENST00000355379 CHGBP05060 677 aa27.4■■□□□ 1.98
SCAMP3-202ENST00000355379 CYP2E1P05181 493 aaPredicted RBP27.4■■□□□ 1.98
SCAMP3-202ENST00000355379 TSGA10IPQ3SY00 556 aa27.4■■□□□ 1.98
SCAMP3-202ENST00000355379 NRXN2Q9P2S2 1712 aa27.39■■□□□ 1.98
SCAMP3-202ENST00000355379 PI16Q6UXB8 463 aa27.39■■□□□ 1.98
SCAMP3-202ENST00000355379 DSCC1Q9BVC3 393 aa27.39■■□□□ 1.98
SCAMP3-202ENST00000355379 CIZ1Q9ULV3 898 aaPredicted RBP27.39■■□□□ 1.98
SCAMP3-202ENST00000355379 SNAP23O00161 211 aa27.38■■□□□ 1.97
SCAMP3-202ENST00000355379 CCDC129Q6ZRS4 1044 aa27.38■■□□□ 1.97
SCAMP3-202ENST00000355379 SPATA5Q8NB90 893 aa27.38■■□□□ 1.97
SCAMP3-202ENST00000355379 APPBP2Q92624 585 aa27.38■■□□□ 1.97
SCAMP3-202ENST00000355379 MAST3O60307 1309 aa27.38■■□□□ 1.97
SCAMP3-202ENST00000355379 POLRMTO00411 1230 aaKnown RBP27.37■■□□□ 1.97
SCAMP3-202ENST00000355379 HSP90AA1P07900 732 aaKnown RBP27.37■■□□□ 1.97
SCAMP3-202ENST00000355379 GRAPQ13588 217 aa27.37■■□□□ 1.97
SCAMP3-202ENST00000355379 NLGN1Q8N2Q7 840 aa27.37■■□□□ 1.97
SCAMP3-202ENST00000355379 GRAPLQ8TC17 118 aaPredicted RBP27.37■■□□□ 1.97
SCAMP3-202ENST00000355379 ZNF804BA4D1E1 1349 aa27.37■■□□□ 1.97
SCAMP3-202ENST00000355379 DDR1Q08345 913 aa27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 CRY2Q49AN0 593 aa27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 COL23A1Q86Y22 540 aaPredicted RBP27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 ZSWIM6Q9HCJ5 1215 aa27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 EP400Q96L91 3159 aa27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 ADD2P35612 726 aa27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 BCAMP50895 628 aa27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 RASGRF1Q13972 1273 aa27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 OSBP2Q969R2 916 aa27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 TTC14Q96N46 770 aa27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 UPF3BQ9BZI7 483 aaKnown RBP27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 PIH1D3Q9NQM4 214 aaKnown RBP27.36■■□□□ 1.97
SCAMP3-202ENST00000355379 RPAP1Q9BWH6 1393 aaPredicted RBP27.35■■□□□ 1.97
SCAMP3-202ENST00000355379 ZBTB22O15209 634 aa27.35■■□□□ 1.97
SCAMP3-202ENST00000355379 PSMA5P28066 241 aa27.35■■□□□ 1.97
SCAMP3-202ENST00000355379 UBE3CQ15386 1083 aa27.35■■□□□ 1.97
SCAMP3-202ENST00000355379 GNL3LQ9NVN8 582 aaKnown RBP27.35■■□□□ 1.97
SCAMP3-202ENST00000355379 QSER1Q2KHR3 1735 aa27.34■■□□□ 1.97
SCAMP3-202ENST00000355379 M0R2C6 588 aa27.34■■□□□ 1.97
SCAMP3-202ENST00000355379 KRT32Q14532 448 aa27.34■■□□□ 1.97
SCAMP3-202ENST00000355379 SLFNL1Q499Z3 407 aa27.34■■□□□ 1.97
SCAMP3-202ENST00000355379 CAVIN4Q5BKX8 364 aa27.33■■□□□ 1.97
SCAMP3-202ENST00000355379 JAKMIP1Q96N16 626 aaKnown RBP27.33■■□□□ 1.97
SCAMP3-202ENST00000355379 KLRG2A4D1S0 409 aaPredicted RBP27.32■■□□□ 1.96
SCAMP3-202ENST00000355379 CASTP20810 708 aaKnown RBP27.32■■□□□ 1.96
SCAMP3-202ENST00000355379 WASHC4Q2M389 1173 aa27.32■■□□□ 1.96
SCAMP3-202ENST00000355379 VPS53Q5VIR6 699 aa27.32■■□□□ 1.96
SCAMP3-202ENST00000355379 RPGRQ92834 1020 aaKnown RBP27.32■■□□□ 1.96
SCAMP3-202ENST00000355379 TMX3Q96JJ7 454 aa27.32■■□□□ 1.96
SCAMP3-202ENST00000355379 CYP46A1Q9Y6A2 500 aa27.32■■□□□ 1.96
SCAMP3-202ENST00000355379 MYH13Q9UKX3 1938 aa27.32■■□□□ 1.96
SCAMP3-202ENST00000355379 HSPD1P10809 573 aaKnown RBP27.31■■□□□ 1.96
SCAMP3-202ENST00000355379 CUL4AQ13619 759 aa27.31■■□□□ 1.96
SCAMP3-202ENST00000355379 ADCK5Q3MIX3 580 aa27.31■■□□□ 1.96
SCAMP3-202ENST00000355379 RUFY3Q7L099 469 aa27.31■■□□□ 1.96
SCAMP3-202ENST00000355379 RBM17Q96I25 401 aaKnown RBP27.31■■□□□ 1.96
SCAMP3-202ENST00000355379 ANKRD31Q8N7Z5 1873 aa27.31■■□□□ 1.96
SCAMP3-202ENST00000355379 SLC9C2Q5TAH2 1124 aa27.31■■□□□ 1.96
SCAMP3-202ENST00000355379 FBXO33Q7Z6M2 555 aa27.31■■□□□ 1.96
SCAMP3-202ENST00000355379 CWC22Q9HCG8 908 aaKnown RBP27.31■■□□□ 1.96
SCAMP3-202ENST00000355379 SEMA3EO15041 775 aa27.3■■□□□ 1.96
SCAMP3-202ENST00000355379 HOXA10P31260 410 aaPredicted RBP27.3■■□□□ 1.96
SCAMP3-202ENST00000355379 MAP3K12Q12852 859 aa27.3■■□□□ 1.96
SCAMP3-202ENST00000355379 ALDH8A1Q9H2A2 487 aaPredicted RBP27.3■■□□□ 1.96
SCAMP3-202ENST00000355379 PNPLA7Q6ZV29 1317 aa27.3■■□□□ 1.96
SCAMP3-202ENST00000355379 IDH1O75874 414 aaKnown RBP27.29■■□□□ 1.96
SCAMP3-202ENST00000355379 FAM84BQ96KN1 310 aaPredicted RBP27.29■■□□□ 1.96
SCAMP3-202ENST00000355379 TCRBV5S4A2TA0A5A2 114 aa27.28■■□□□ 1.96
SCAMP3-202ENST00000355379 PDE6AP16499 860 aa27.28■■□□□ 1.96
SCAMP3-202ENST00000355379 GYG1P46976 350 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms