RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 SPEF2Q9C093 1822 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 DDX60Q8IY21 1712 aaKnown RBP11.3□□□□□ -0.6
RPE-201ENST00000354506 CTIFO43310 598 aaKnown RBP11.3□□□□□ -0.6
RPE-201ENST00000354506 OTUD7BQ6GQQ9 843 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 PLBD2Q8NHP8 589 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 BRF1Q92994 677 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 GPR108Q9NPR9 543 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 RCOR1Q9UKL0 485 aa11.3□□□□□ -0.6
RPE-201ENST00000354506 H3BQV1 296 aa11.29□□□□□ -0.6
RPE-201ENST00000354506 TNNT1P13805 278 aa11.29□□□□□ -0.6
RPE-201ENST00000354506 SNW1Q13573 536 aaKnown RBP11.29□□□□□ -0.6
RPE-201ENST00000354506 IQCB1Q15051 598 aa11.29□□□□□ -0.6
RPE-201ENST00000354506 IFFO2Q5TF58 517 aa11.29□□□□□ -0.6
RPE-201ENST00000354506 DDX46Q7L014 1031 aaKnown RBP11.29□□□□□ -0.6
RPE-201ENST00000354506 NSUN7Q8NE18 718 aaKnown RBP11.29□□□□□ -0.6
RPE-201ENST00000354506 DSCC1Q9BVC3 393 aa11.29□□□□□ -0.6
RPE-201ENST00000354506 HELLSQ9NRZ9 838 aa11.29□□□□□ -0.6
RPE-201ENST00000354506 ATP5J2-PTCD1G3V325 749 aa11.29□□□□□ -0.6
RPE-201ENST00000354506 PTCD1O75127 700 aaKnown RBP11.29□□□□□ -0.6
RPE-201ENST00000354506 ZNF165P49910 485 aa11.29□□□□□ -0.6
RPE-201ENST00000354506 NAA16Q6N069 864 aaPredicted RBP11.29□□□□□ -0.6
RPE-201ENST00000354506 UBE3BQ7Z3V4 1068 aa11.29□□□□□ -0.6
RPE-201ENST00000354506 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
RPE-201ENST00000354506 GOLGA6L6A8MZA4 724 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 BIN1O00499 593 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 CAVIN2O95810 425 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 HMGB1P09429 215 aaKnown RBP11.28□□□□□ -0.6
RPE-201ENST00000354506 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
RPE-201ENST00000354506 CDC25BP30305 580 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 ZNF75DP51815 510 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 EVCP57679 992 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 HSP90AB3PQ58FF7 597 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 DHX32Q7L7V1 743 aaKnown RBP11.28□□□□□ -0.6
RPE-201ENST00000354506 CACTINQ8WUQ7 758 aaKnown RBP11.28□□□□□ -0.6
RPE-201ENST00000354506 CCDC85AQ96PX6 553 aaPredicted RBP11.28□□□□□ -0.6
RPE-201ENST00000354506 ZBTB22O15209 634 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 ENGASEQ8NFI3 743 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 TMX1Q9H3N1 280 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 GJB4Q9NTQ9 266 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 CLIP2Q9UDT6 1046 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 CFAP45Q9UL16 551 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 NWD2Q9ULI1 1742 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 PAPPAQ13219 1627 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 A0A087WZG4 1122 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 ZC3H6P61129 1189 aaKnown RBP11.28□□□□□ -0.6
RPE-201ENST00000354506 HSP90AA4PQ58FG1 418 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 ZMYM1Q5SVZ6 1142 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 GORABQ5T7V8 394 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 SARM1Q6SZW1 724 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 ILDR1Q86SU0 546 aaPredicted RBP11.28□□□□□ -0.6
RPE-201ENST00000354506 TRERF1Q96PN7 1200 aa11.28□□□□□ -0.6
RPE-201ENST00000354506 NBPF26B4DH59 902 aa11.27□□□□□ -0.6
RPE-201ENST00000354506 NBPF14Q5TI25 921 aa11.27□□□□□ -0.6
RPE-201ENST00000354506 NBPF10Q6P3W6 841 aaKnown RBP11.27□□□□□ -0.6
RPE-201ENST00000354506 C11orf57Q6ZUT1 292 aaPredicted RBP11.27□□□□□ -0.6
RPE-201ENST00000354506 NBPF15Q8N660 670 aa11.27□□□□□ -0.6
RPE-201ENST00000354506 ST7Q9NRC1 585 aa11.27□□□□□ -0.6
RPE-201ENST00000354506 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
RPE-201ENST00000354506 ZNF771Q7L3S4 317 aaPredicted RBP11.27□□□□□ -0.61
RPE-201ENST00000354506 ANKRD7Q92527 254 aa11.27□□□□□ -0.61
RPE-201ENST00000354506 ZSCAN25Q6NSZ9 544 aa11.26□□□□□ -0.61
RPE-201ENST00000354506 LMBR1LQ6UX01 489 aa11.26□□□□□ -0.61
RPE-201ENST00000354506 GOLPH3LQ9H4A5 285 aa11.26□□□□□ -0.61
RPE-201ENST00000354506 C19orf44Q9H6X5 657 aa11.26□□□□□ -0.61
RPE-201ENST00000354506 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
RPE-201ENST00000354506 ZNF330Q9Y3S2 320 aaPredicted RBP11.26□□□□□ -0.61
RPE-201ENST00000354506 ERICH4A6NGS2 130 aa11.26□□□□□ -0.61
RPE-201ENST00000354506 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.26□□□□□ -0.61
RPE-201ENST00000354506 ZNF274Q96GC6 653 aaPredicted RBP11.26□□□□□ -0.61
RPE-201ENST00000354506 NEUROD6Q96NK8 337 aa11.26□□□□□ -0.61
RPE-201ENST00000354506 ATG3Q9NT62 314 aa11.26□□□□□ -0.61
RPE-201ENST00000354506 HSPD1P10809 573 aaKnown RBP11.26□□□□□ -0.61
RPE-201ENST00000354506 PAG1Q9NWQ8 432 aa11.26□□□□□ -0.61
RPE-201ENST00000354506 NLRP2Q9NX02 1062 aa11.26□□□□□ -0.61
RPE-201ENST00000354506 KCPQ6ZWJ8 1503 aa11.25□□□□□ -0.61
RPE-201ENST00000354506 E7EWF7 191 aa11.25□□□□□ -0.61
RPE-201ENST00000354506 FOXP2O15409 715 aa11.25□□□□□ -0.61
RPE-201ENST00000354506 PDIA3P30101 505 aaKnown RBP11.25□□□□□ -0.61
RPE-201ENST00000354506 NCBP1Q09161 790 aaKnown RBP11.25□□□□□ -0.61
RPE-201ENST00000354506 SMAP1Q8IYB5 467 aaPredicted RBP11.25□□□□□ -0.61
RPE-201ENST00000354506 CIAO1O76071 339 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 FDPSP14324 419 aaKnown RBP11.24□□□□□ -0.61
RPE-201ENST00000354506 HAND2P61296 217 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 APOBRQ0VD83 1088 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 TTC5Q8N0Z6 440 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 FAM177A1Q8N128 213 aaPredicted RBP11.24□□□□□ -0.61
RPE-201ENST00000354506 PTPDC1A2A3K4 754 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 BECN2A8MW95 431 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 GOLGA6L19H0YKK7 550 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 CTAGE5O15320 804 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 POLR3DP05423 398 aaPredicted RBP11.24□□□□□ -0.61
RPE-201ENST00000354506 TIMM10P62072 90 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 RBM6P78332 1123 aaKnown RBP11.24□□□□□ -0.61
RPE-201ENST00000354506 GOLGA8FQ08AF8 430 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 GOLGA8DPQ0D2H9 430 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 DHX40Q8IX18 779 aaKnown RBP11.24□□□□□ -0.61
RPE-201ENST00000354506 CPDO75976 1380 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 IL15P40933 162 aaPredicted RBP11.24□□□□□ -0.61
RPE-201ENST00000354506 MRFAP1L1Q96HT8 127 aa11.24□□□□□ -0.61
RPE-201ENST00000354506 KCND1Q9NSA2 647 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms