RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 DENND2AQ9ULE3 1009 aa16.45■□□□□ 0.22
TRIM4-201ENST00000349062 AKAP2Q9Y2D5 859 aa16.45■□□□□ 0.22
TRIM4-201ENST00000349062 RPAP1Q9BWH6 1393 aaPredicted RBP16.45■□□□□ 0.22
TRIM4-201ENST00000349062 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
TRIM4-201ENST00000349062 GIMAP6Q6P9H5 292 aa16.45■□□□□ 0.22
TRIM4-201ENST00000349062 ZSCAN31Q96LW9 406 aaPredicted RBP16.44■□□□□ 0.22
TRIM4-201ENST00000349062 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
TRIM4-201ENST00000349062 TPM2P07951 284 aa16.44■□□□□ 0.22
TRIM4-201ENST00000349062 MCAMP43121 646 aa16.44■□□□□ 0.22
TRIM4-201ENST00000349062 MTMR6Q9Y217 621 aa16.44■□□□□ 0.22
TRIM4-201ENST00000349062 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
TRIM4-201ENST00000349062 MIGA1Q8NAN2 632 aa16.43■□□□□ 0.22
TRIM4-201ENST00000349062 SH2B1Q9NRF2 756 aaPredicted RBP16.43■□□□□ 0.22
TRIM4-201ENST00000349062 SIPA1L3O60292 1781 aaPredicted RBP16.43■□□□□ 0.22
TRIM4-201ENST00000349062 TCHHQ07283 1943 aa16.43■□□□□ 0.22
TRIM4-201ENST00000349062 MED23Q9ULK4 1368 aa16.42■□□□□ 0.22
TRIM4-201ENST00000349062 BCAMP50895 628 aa16.42■□□□□ 0.22
TRIM4-201ENST00000349062 GJB4Q9NTQ9 266 aa16.42■□□□□ 0.22
TRIM4-201ENST00000349062 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
TRIM4-201ENST00000349062 EP400Q96L91 3159 aa16.42■□□□□ 0.22
TRIM4-201ENST00000349062 E7EWF7 191 aa16.42■□□□□ 0.22
TRIM4-201ENST00000349062 FTOQ9C0B1 505 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRIM4-201ENST00000349062 GPAA1O43292 621 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 RALYLQ86SE5 291 aaKnown RBP16.41■□□□□ 0.22
TRIM4-201ENST00000349062 PDE8AO60658 829 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 CKAP2LQ8IYA6 745 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
TRIM4-201ENST00000349062 TM6SF1Q9BZW5 370 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 MBD3O95983 291 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 FGAP02671 866 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 ZMYM1Q5SVZ6 1142 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 MEX3CQ5U5Q3 659 aaKnown RBP16.41■□□□□ 0.22
TRIM4-201ENST00000349062 CCDC102BQ68D86 513 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 PDCL3Q9H2J4 239 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 PIH1D3Q9NQM4 214 aaKnown RBP16.41■□□□□ 0.22
TRIM4-201ENST00000349062 SRP68Q9UHB9 627 aaKnown RBP16.41■□□□□ 0.22
TRIM4-201ENST00000349062 KCPQ6ZWJ8 1503 aa16.41■□□□□ 0.22
TRIM4-201ENST00000349062 KRT32Q14532 448 aa16.4■□□□□ 0.22
TRIM4-201ENST00000349062 ANKRD1Q15327 319 aa16.4■□□□□ 0.22
TRIM4-201ENST00000349062 HMG20BQ9P0W2 317 aa16.4■□□□□ 0.22
TRIM4-201ENST00000349062 SCRN1Q12765 414 aa16.4■□□□□ 0.22
TRIM4-201ENST00000349062 VPS37DQ86XT2 251 aa16.4■□□□□ 0.22
TRIM4-201ENST00000349062 ATP6V1DQ9Y5K8 247 aa16.4■□□□□ 0.22
TRIM4-201ENST00000349062 SPATA31A1Q5TZJ5 1347 aa16.4■□□□□ 0.22
TRIM4-201ENST00000349062 MAGEB6Q8N7X4 407 aa16.4■□□□□ 0.22
TRIM4-201ENST00000349062 PRDM10Q9NQV6 1147 aa16.4■□□□□ 0.22
TRIM4-201ENST00000349062 RIPOR2Q9Y4F9 1068 aa16.4■□□□□ 0.22
TRIM4-201ENST00000349062 INTS5Q6P9B9 1019 aaKnown RBP16.39■□□□□ 0.21
TRIM4-201ENST00000349062 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.39■□□□□ 0.21
TRIM4-201ENST00000349062 MYL10Q9BUA6 226 aa16.39■□□□□ 0.21
TRIM4-201ENST00000349062 TOM1O60784 492 aa16.39■□□□□ 0.21
TRIM4-201ENST00000349062 IL6STP40189 918 aaPredicted RBP16.39■□□□□ 0.21
TRIM4-201ENST00000349062 IMMTQ16891 758 aaKnown RBP16.39■□□□□ 0.21
TRIM4-201ENST00000349062 DHX32Q7L7V1 743 aaKnown RBP16.39■□□□□ 0.21
TRIM4-201ENST00000349062 SYAP1Q96A49 352 aaPredicted RBP16.39■□□□□ 0.21
TRIM4-201ENST00000349062 AIDAQ96BJ3 306 aa16.39■□□□□ 0.21
TRIM4-201ENST00000349062 ZKSCAN3Q9BRR0 538 aa16.39■□□□□ 0.21
TRIM4-201ENST00000349062 LRP2BPQ9P2M1 347 aa16.39■□□□□ 0.21
TRIM4-201ENST00000349062 ZNF532Q9HCE3 1301 aa16.39■□□□□ 0.21
TRIM4-201ENST00000349062 BCL9O00512 1426 aa16.39■□□□□ 0.21
TRIM4-201ENST00000349062 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 UQCRHLA0A096LP55 91 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 ZNF213O14771 459 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 PDE8BO95263 885 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 UQCRHP07919 91 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 IGHMBP2P38935 993 aaKnown RBP16.38■□□□□ 0.21
TRIM4-201ENST00000349062 TSPY26PQ9H489 355 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 CLEC17AQ6ZS10 378 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 SPATA32Q96LK8 384 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 ARMT1Q9H993 441 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 MRC1P22897 1456 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 CPLX1O14810 134 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 POLR3DP05423 398 aaPredicted RBP16.38■□□□□ 0.21
TRIM4-201ENST00000349062 GYG1P46976 350 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 HELLSQ9NRZ9 838 aa16.38■□□□□ 0.21
TRIM4-201ENST00000349062 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 CIAO1O76071 339 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 KRT85P78386 507 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 NFXL1Q6ZNB6 911 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.37■□□□□ 0.21
TRIM4-201ENST00000349062 KLF18A0A0U1RQI7 1052 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 CHAF1AQ13111 956 aaPredicted RBP16.37■□□□□ 0.21
TRIM4-201ENST00000349062 LRSAM1Q6UWE0 723 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 GOLGA8BA8MQT2 603 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 GNPATO15228 680 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 PRC1O43663 620 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 CSF1RP07333 972 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 CTDSPL2Q05D32 466 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 TRDNQ13061 729 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 ERFEQ4G0M1 354 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
TRIM4-201ENST00000349062 A0A087WWV3 80 aa16.36■□□□□ 0.21
TRIM4-201ENST00000349062 MINDY4BA8MYZ0 360 aa16.36■□□□□ 0.21
TRIM4-201ENST00000349062 B4E1Z4 1266 aa16.36■□□□□ 0.21
TRIM4-201ENST00000349062 PRKAB2O43741 272 aa16.36■□□□□ 0.21
TRIM4-201ENST00000349062 OFD1O75665 1012 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms