RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 HSCBQ8IWL3 235 aa22.51■■□□□ 1.19
PTN-201ENST00000348225 SNX21Q969T3 373 aa22.51■■□□□ 1.19
PTN-201ENST00000348225 MCAMP43121 646 aa22.5■■□□□ 1.19
PTN-201ENST00000348225 ZAP70P43403 619 aa22.5■■□□□ 1.19
PTN-201ENST00000348225 SCARF1Q14162 830 aa22.5■■□□□ 1.19
PTN-201ENST00000348225 TTF1Q15361 905 aaPredicted RBP22.5■■□□□ 1.19
PTN-201ENST00000348225 TBC1D2Q9BYX2 928 aa22.5■■□□□ 1.19
PTN-201ENST00000348225 RBM17Q96I25 401 aaKnown RBP22.49■■□□□ 1.19
PTN-201ENST00000348225 CCDC171Q6TFL3 1326 aa22.49■■□□□ 1.19
PTN-201ENST00000348225 ZFYP08048 801 aaPredicted RBP22.49■■□□□ 1.19
PTN-201ENST00000348225 HSPA4P34932 840 aa22.49■■□□□ 1.19
PTN-201ENST00000348225 ANTXR1Q9H6X2 564 aa22.49■■□□□ 1.19
PTN-201ENST00000348225 PARP3Q9Y6F1 533 aa22.49■■□□□ 1.19
PTN-201ENST00000348225 KCNJ4P48050 445 aa22.48■■□□□ 1.19
PTN-201ENST00000348225 SLC4A3P48751 1232 aa22.48■■□□□ 1.19
PTN-201ENST00000348225 MCMDC2Q4G0Z9 681 aa22.48■■□□□ 1.19
PTN-201ENST00000348225 ANO8Q9HCE9 1232 aaPredicted RBP22.48■■□□□ 1.19
PTN-201ENST00000348225 HELLSQ9NRZ9 838 aa22.48■■□□□ 1.19
PTN-201ENST00000348225 MYH7P12883 1935 aa22.48■■□□□ 1.19
PTN-201ENST00000348225 SNAP23O00161 211 aa22.47■■□□□ 1.19
PTN-201ENST00000348225 RNF113AO15541 343 aaKnown RBP22.47■■□□□ 1.19
PTN-201ENST00000348225 IL17RAQ96F46 866 aa22.47■■□□□ 1.19
PTN-201ENST00000348225 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.47■■□□□ 1.19
PTN-201ENST00000348225 ZSCAN25Q6NSZ9 544 aa22.46■■□□□ 1.19
PTN-201ENST00000348225 GNL3LQ9NVN8 582 aaKnown RBP22.46■■□□□ 1.19
PTN-201ENST00000348225 KLRG2A4D1S0 409 aaPredicted RBP22.46■■□□□ 1.19
PTN-201ENST00000348225 MMP10P09238 476 aa22.46■■□□□ 1.19
PTN-201ENST00000348225 CAVIN4Q5BKX8 364 aa22.46■■□□□ 1.19
PTN-201ENST00000348225 ZMYM1Q5SVZ6 1142 aa22.46■■□□□ 1.19
PTN-201ENST00000348225 SPATA5Q8NB90 893 aa22.46■■□□□ 1.19
PTN-201ENST00000348225 IL27Q8NEV9 243 aa22.46■■□□□ 1.19
PTN-201ENST00000348225 BRIP1Q9BX63 1249 aa22.46■■□□□ 1.19
PTN-201ENST00000348225 ST18O60284 1047 aa22.45■■□□□ 1.18
PTN-201ENST00000348225 HOXA10P31260 410 aaPredicted RBP22.45■■□□□ 1.18
PTN-201ENST00000348225 PTH1RQ03431 593 aa22.45■■□□□ 1.18
PTN-201ENST00000348225 PI16Q6UXB8 463 aa22.45■■□□□ 1.18
PTN-201ENST00000348225 HMG20BQ9P0W2 317 aa22.45■■□□□ 1.18
PTN-201ENST00000348225 ANKRD31Q8N7Z5 1873 aa22.45■■□□□ 1.18
PTN-201ENST00000348225 BCAMP50895 628 aa22.44■■□□□ 1.18
PTN-201ENST00000348225 RASGRF1Q13972 1273 aa22.44■■□□□ 1.18
PTN-201ENST00000348225 ZNF589Q86UQ0 364 aaPredicted RBP22.44■■□□□ 1.18
PTN-201ENST00000348225 MAP4K1Q92918 833 aa22.44■■□□□ 1.18
PTN-201ENST00000348225 PALD1Q9ULE6 856 aa22.44■■□□□ 1.18
PTN-201ENST00000348225 ZNF804BA4D1E1 1349 aa22.44■■□□□ 1.18
PTN-201ENST00000348225 CYP2E1P05181 493 aaPredicted RBP22.43■■□□□ 1.18
PTN-201ENST00000348225 CRAMP1Q96RY5 1269 aa22.43■■□□□ 1.18
PTN-201ENST00000348225 BBOX1O75936 387 aa22.42■■□□□ 1.18
PTN-201ENST00000348225 VPS37DQ86XT2 251 aa22.42■■□□□ 1.18
PTN-201ENST00000348225 RBM8AQ9Y5S9 174 aaKnown RBP22.42■■□□□ 1.18
PTN-201ENST00000348225 PDE6BP35913 854 aa22.42■■□□□ 1.18
PTN-201ENST00000348225 MSL1Q68DK7 614 aa22.42■■□□□ 1.18
PTN-201ENST00000348225 TMC4Q7Z404 712 aa22.42■■□□□ 1.18
PTN-201ENST00000348225 DEFB132Q7Z7B7 95 aa22.42■■□□□ 1.18
PTN-201ENST00000348225 CCDC125Q86Z20 511 aa22.42■■□□□ 1.18
PTN-201ENST00000348225 LEMD3Q9Y2U8 911 aa22.42■■□□□ 1.18
PTN-201ENST00000348225 DOCK2Q92608 1830 aa22.41■■□□□ 1.18
PTN-201ENST00000348225 XDHP47989 1333 aa22.41■■□□□ 1.18
PTN-201ENST00000348225 RNF20Q5VTR2 975 aa22.41■■□□□ 1.18
PTN-201ENST00000348225 APPBP2Q92624 585 aa22.41■■□□□ 1.18
PTN-201ENST00000348225 SEC62Q99442 399 aaKnown RBP22.41■■□□□ 1.18
PTN-201ENST00000348225 ANKIB1Q9P2G1 1089 aa22.41■■□□□ 1.18
PTN-201ENST00000348225 MAST3O60307 1309 aa22.4■■□□□ 1.18
PTN-201ENST00000348225 CHGBP05060 677 aa22.4■■□□□ 1.18
PTN-201ENST00000348225 ZKSCAN1P17029 563 aaPredicted RBP22.4■■□□□ 1.18
PTN-201ENST00000348225 GYG1P46976 350 aa22.4■■□□□ 1.18
PTN-201ENST00000348225 WASHC4Q2M389 1173 aa22.4■■□□□ 1.18
PTN-201ENST00000348225 PIH1D3Q9NQM4 214 aaKnown RBP22.4■■□□□ 1.18
PTN-201ENST00000348225 SNX14Q9Y5W7 946 aa22.4■■□□□ 1.18
PTN-201ENST00000348225 K7ELQ4 463 aaPredicted RBP22.39■■□□□ 1.18
PTN-201ENST00000348225 SEMA3EO15041 775 aa22.39■■□□□ 1.18
PTN-201ENST00000348225 NECTIN1Q15223 517 aa22.39■■□□□ 1.18
PTN-201ENST00000348225 PRPF40BQ6NWY9 871 aaKnown RBP22.39■■□□□ 1.18
PTN-201ENST00000348225 CCDC129Q6ZRS4 1044 aa22.39■■□□□ 1.18
PTN-201ENST00000348225 KCNB2Q92953 911 aa22.39■■□□□ 1.18
PTN-201ENST00000348225 U3KPZ7 1027 aaPredicted RBP22.39■■□□□ 1.18
PTN-201ENST00000348225 IDH1O75874 414 aaKnown RBP22.39■■□□□ 1.17
PTN-201ENST00000348225 ADD2P35612 726 aa22.39■■□□□ 1.17
PTN-201ENST00000348225 MAP3K12Q12852 859 aa22.39■■□□□ 1.17
PTN-201ENST00000348225 FAM84BQ96KN1 310 aaPredicted RBP22.39■■□□□ 1.17
PTN-201ENST00000348225 DENND2AQ9ULE3 1009 aa22.39■■□□□ 1.17
PTN-201ENST00000348225 NPR1P16066 1061 aa22.38■■□□□ 1.17
PTN-201ENST00000348225 UBE3CQ15386 1083 aa22.38■■□□□ 1.17
PTN-201ENST00000348225 SLC9C2Q5TAH2 1124 aa22.38■■□□□ 1.17
PTN-201ENST00000348225 CREB3L3Q68CJ9 461 aa22.38■■□□□ 1.17
PTN-201ENST00000348225 FBXO33Q7Z6M2 555 aa22.38■■□□□ 1.17
PTN-201ENST00000348225 LRRC37AA6NMS7 1700 aa22.37■■□□□ 1.17
PTN-201ENST00000348225 MYH13Q9UKX3 1938 aa22.37■■□□□ 1.17
PTN-201ENST00000348225 HIBADHP31937 336 aaKnown RBP22.37■■□□□ 1.17
PTN-201ENST00000348225 MCM2P49736 904 aa22.37■■□□□ 1.17
PTN-201ENST00000348225 NEK4P51957 841 aa22.37■■□□□ 1.17
PTN-201ENST00000348225 DSCC1Q9BVC3 393 aa22.37■■□□□ 1.17
PTN-201ENST00000348225 MYO5AQ9Y4I1 1855 aaKnown RBP22.37■■□□□ 1.17
PTN-201ENST00000348225 PDS5AQ29RF7 1337 aaKnown RBP22.36■■□□□ 1.17
PTN-201ENST00000348225 M0R2C6 588 aa22.36■■□□□ 1.17
PTN-201ENST00000348225 ZBTB22O15209 634 aa22.36■■□□□ 1.17
PTN-201ENST00000348225 CD2BP2O95400 341 aaKnown RBP22.36■■□□□ 1.17
PTN-201ENST00000348225 SRGNP10124 158 aa22.36■■□□□ 1.17
PTN-201ENST00000348225 SLFNL1Q499Z3 407 aa22.36■■□□□ 1.17
PTN-201ENST00000348225 ILDR2Q71H61 639 aa22.36■■□□□ 1.17
PTN-201ENST00000348225 OSBP2Q969R2 916 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms