RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 CCDC102BQ68D86 513 aa16.83■□□□□ 0.28
CDK5RAP1-202ENST00000346416 SMIM5Q71RC9 77 aa16.83■□□□□ 0.28
CDK5RAP1-202ENST00000346416 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
CDK5RAP1-202ENST00000346416 LMBRD1Q9NUN5 540 aa16.83■□□□□ 0.28
CDK5RAP1-202ENST00000346416 WDR33Q9C0J8 1336 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 HSPA1LP34931 641 aa16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 PHKA1P46020 1223 aa16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 ST3GAL1Q11201 340 aa16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 TOB2Q14106 344 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 WASHC4Q2M389 1173 aa16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 DDX49Q9Y6V7 483 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 LAMB2P55268 1798 aa16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 RC3H1Q5TC82 1133 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 NECAB1Q8N987 351 aa16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 NHSQ6T4R5 1651 aa16.82■□□□□ 0.28
CDK5RAP1-202ENST00000346416 AFF2P51816 1311 aa16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 ARID4AP29374 1257 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 IGHMBP2P38935 993 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 KLHL40Q2TBA0 621 aa16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 CCNL1Q9UK58 526 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 SNAP23O00161 211 aa16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 PRPF40AO75400 957 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 RPS6KA4O75676 772 aa16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 SLC5A1P13866 664 aa16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 SYT1P21579 422 aa16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 ERFEQ4G0M1 354 aa16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 STOX1Q6ZVD7 989 aa16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 APPBP2Q92624 585 aa16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.81■□□□□ 0.28
CDK5RAP1-202ENST00000346416 MYH7P12883 1935 aa16.8■□□□□ 0.28
CDK5RAP1-202ENST00000346416 UQCRFS1P1P0C7P4 283 aa16.8■□□□□ 0.28
CDK5RAP1-202ENST00000346416 GJB2P29033 226 aa16.8■□□□□ 0.28
CDK5RAP1-202ENST00000346416 TTF1Q15361 905 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP1-202ENST00000346416 BICDL1Q6ZP65 573 aa16.8■□□□□ 0.28
CDK5RAP1-202ENST00000346416 PUS7LQ9H0K6 701 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP1-202ENST00000346416 BCL2L12Q9HB09 334 aa16.8■□□□□ 0.28
CDK5RAP1-202ENST00000346416 RGL2O15211 777 aa16.79■□□□□ 0.28
CDK5RAP1-202ENST00000346416 GNPATO15228 680 aa16.79■□□□□ 0.28
CDK5RAP1-202ENST00000346416 STX6O43752 255 aa16.79■□□□□ 0.28
CDK5RAP1-202ENST00000346416 DTNBO60941 627 aa16.79■□□□□ 0.28
CDK5RAP1-202ENST00000346416 TBC1D9BQ66K14 1250 aa16.79■□□□□ 0.28
CDK5RAP1-202ENST00000346416 NARFQ9UHQ1 456 aa16.79■□□□□ 0.28
CDK5RAP1-202ENST00000346416 ARAP2Q8WZ64 1704 aa16.79■□□□□ 0.28
CDK5RAP1-202ENST00000346416 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
CDK5RAP1-202ENST00000346416 FSD2A1L4K1 749 aa16.79■□□□□ 0.28
CDK5RAP1-202ENST00000346416 GOLGA6L3A6NEY3 463 aa16.79■□□□□ 0.28
CDK5RAP1-202ENST00000346416 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 FOXP2O15409 715 aa16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 HMGB1P09429 215 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 SLC9C2Q5TAH2 1124 aa16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 ZSCAN25Q6NSZ9 544 aa16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 Q6ZUG5 572 aa16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 C3orf67Q6ZVT6 689 aa16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 PIH1D3Q9NQM4 214 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 ONECUT3O60422 494 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 ZSCAN22P10073 491 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 ADD2P35612 726 aa16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 TTLL5Q6EMB2 1281 aa16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 CDC5LQ99459 802 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP1-202ENST00000346416 E7EWF7 191 aa16.77■□□□□ 0.28
CDK5RAP1-202ENST00000346416 IDH1O75874 414 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP1-202ENST00000346416 GTF2E1P29083 439 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP1-202ENST00000346416 CHRNDQ07001 517 aa16.77■□□□□ 0.28
CDK5RAP1-202ENST00000346416 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP1-202ENST00000346416 FOXD4L6Q3SYB3 417 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP1-202ENST00000346416 L1TD1Q5T7N2 865 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP1-202ENST00000346416 FOXD4L3Q6VB84 417 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP1-202ENST00000346416 DHX32Q7L7V1 743 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP1-202ENST00000346416 RTCBQ9Y3I0 505 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP1-202ENST00000346416 MYO5AQ9Y4I1 1855 aaKnown RBP16.77■□□□□ 0.27
CDK5RAP1-202ENST00000346416 LAMA4Q16363 1823 aa16.77■□□□□ 0.27
CDK5RAP1-202ENST00000346416 GPAA1O43292 621 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 ZPR1O75312 459 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 SEPT12Q8IYM1 358 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 SPATA5Q8NB90 893 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 LRRC2Q9BYS8 371 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 CTNNA3Q9UI47 895 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 TRPC5Q9UL62 973 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 COL4A1P02462 1669 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 SBF2Q86WG5 1849 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 STK3Q13188 491 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 RASGRF1Q13972 1273 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 AMIGO3Q86WK7 504 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
CDK5RAP1-202ENST00000346416 ATRNO75882 1429 aa16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 EP400Q96L91 3159 aa16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 FGAP02671 866 aa16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 FGD1P98174 961 aa16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 UBE3CQ15386 1083 aa16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 SLC10A5Q5PT55 438 aa16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 ANKRD18AQ8IVF6 992 aa16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 GPT2Q8TD30 523 aa16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 BRF1Q92994 677 aa16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 EXOSC10Q01780 885 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 LY75O60449 1722 aa16.75■□□□□ 0.27
CDK5RAP1-202ENST00000346416 TAF1LQ8IZX4 1826 aa16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 F13A1P00488 732 aa16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 PDE6AP16499 860 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms