RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 LUC7L2Q9Y383 392 aaKnown RBP19.83■□□□□ 0.76
SPAST-202ENST00000345662 ALDH1L1O75891 902 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 STAMBPO95630 424 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 CPA1P15085 419 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 STX17P56962 302 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 APOBRQ0VD83 1088 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 ZSCAN26Q16670 478 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 DHX32Q7L7V1 743 aaKnown RBP19.82■□□□□ 0.76
SPAST-202ENST00000345662 CEP63Q96MT8 703 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 RASAL2Q9UJF2 1139 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 ELP1O95163 1332 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 UBXN1Q04323 297 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 CNKSR2Q8WXI2 1034 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 A0A1W2PRG0 241 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 TTC14Q96N46 770 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 TMTC2Q8N394 836 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 IFT81Q8WYA0 676 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 DDX12PQ92771 950 aa19.82■□□□□ 0.76
SPAST-202ENST00000345662 PLB1Q6P1J6 1458 aa19.81■□□□□ 0.76
SPAST-202ENST00000345662 PRC1O43663 620 aa19.81■□□□□ 0.76
SPAST-202ENST00000345662 ZNF444Q8N0Y2 327 aaPredicted RBP19.81■□□□□ 0.76
SPAST-202ENST00000345662 OTUD7AQ8TE49 926 aaPredicted RBP19.81■□□□□ 0.76
SPAST-202ENST00000345662 ANKRD18BA2A2Z9 1011 aa19.81■□□□□ 0.76
SPAST-202ENST00000345662 FANCCQ00597 558 aa19.81■□□□□ 0.76
SPAST-202ENST00000345662 TRIM75PA6NK02 468 aa19.81■□□□□ 0.76
SPAST-202ENST00000345662 RTN1Q16799 776 aa19.81■□□□□ 0.76
SPAST-202ENST00000345662 CCDC122Q5T0U0 273 aa19.81■□□□□ 0.76
SPAST-202ENST00000345662 THEMISQ8N1K5 641 aaPredicted RBP19.81■□□□□ 0.76
SPAST-202ENST00000345662 TTF2Q9UNY4 1162 aaKnown RBP19.81■□□□□ 0.76
SPAST-202ENST00000345662 UGGT2Q9NYU1 1516 aa19.81■□□□□ 0.76
SPAST-202ENST00000345662 SPTY2D1Q68D10 685 aaPredicted RBP19.81■□□□□ 0.76
SPAST-202ENST00000345662 SELENOSQ9BQE4 189 aa19.81■□□□□ 0.76
SPAST-202ENST00000345662 KRT23Q9C075 422 aa19.81■□□□□ 0.76
SPAST-202ENST00000345662 ANXA1P04083 346 aa19.8■□□□□ 0.76
SPAST-202ENST00000345662 ARHGAP6O43182 974 aa19.8■□□□□ 0.76
SPAST-202ENST00000345662 GOLGA6CA6NDK9 693 aa19.8■□□□□ 0.76
SPAST-202ENST00000345662 GOLGA6DP0CG33 693 aa19.8■□□□□ 0.76
SPAST-202ENST00000345662 GOLGA6AQ9NYA3 693 aa19.8■□□□□ 0.76
SPAST-202ENST00000345662 BLMP54132 1417 aaPredicted RBP19.8■□□□□ 0.76
SPAST-202ENST00000345662 PTCD1O75127 700 aaKnown RBP19.8■□□□□ 0.76
SPAST-202ENST00000345662 CCDC172P0C7W6 258 aa19.8■□□□□ 0.76
SPAST-202ENST00000345662 LEO1Q8WVC0 666 aaPredicted RBP19.8■□□□□ 0.76
SPAST-202ENST00000345662 PLVAPQ9BX97 442 aa19.8■□□□□ 0.76
SPAST-202ENST00000345662 MMRN2Q9H8L6 949 aa19.8■□□□□ 0.76
SPAST-202ENST00000345662 SAMD15Q9P1V8 674 aa19.8■□□□□ 0.76
SPAST-202ENST00000345662 FBLN1P23142 703 aa19.79■□□□□ 0.76
SPAST-202ENST00000345662 SPATA24Q86W54 205 aa19.79■□□□□ 0.76
SPAST-202ENST00000345662 CHPF2Q9P2E5 772 aa19.79■□□□□ 0.76
SPAST-202ENST00000345662 SNX14Q9Y5W7 946 aa19.79■□□□□ 0.76
SPAST-202ENST00000345662 PROSER2Q86WR7 435 aaPredicted RBP19.79■□□□□ 0.76
SPAST-202ENST00000345662 FAM173BQ6P4H8 233 aa19.79■□□□□ 0.76
SPAST-202ENST00000345662 CCDC77Q9BR77 488 aa19.79■□□□□ 0.76
SPAST-202ENST00000345662 CNNM2Q9H8M5 875 aa19.79■□□□□ 0.76
SPAST-202ENST00000345662 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
SPAST-202ENST00000345662 LMBR1Q8WVP7 490 aa19.78■□□□□ 0.76
SPAST-202ENST00000345662 CTNNA2P26232 953 aa19.78■□□□□ 0.76
SPAST-202ENST00000345662 TNNC1P63316 161 aa19.78■□□□□ 0.76
SPAST-202ENST00000345662 CWC25Q9NXE8 425 aaPredicted RBP19.78■□□□□ 0.76
SPAST-202ENST00000345662 GRM8O00222 908 aa19.78■□□□□ 0.76
SPAST-202ENST00000345662 IGSF22Q8N9C0 903 aa19.78■□□□□ 0.76
SPAST-202ENST00000345662 ATP5J2-PTCD1G3V325 749 aa19.78■□□□□ 0.76
SPAST-202ENST00000345662 TSGA10Q9BZW7 698 aa19.78■□□□□ 0.76
SPAST-202ENST00000345662 RPS6KB1P23443 525 aa19.77■□□□□ 0.76
SPAST-202ENST00000345662 PRPHP41219 470 aa19.77■□□□□ 0.76
SPAST-202ENST00000345662 LDHAL6AQ6ZMR3 332 aa19.77■□□□□ 0.76
SPAST-202ENST00000345662 KRI1Q8N9T8 703 aaKnown RBP19.77■□□□□ 0.76
SPAST-202ENST00000345662 RAPGEF3O95398 923 aa19.77■□□□□ 0.76
SPAST-202ENST00000345662 GPR161Q8N6U8 529 aaKnown RBP19.77■□□□□ 0.76
SPAST-202ENST00000345662 ZNF215Q9UL58 517 aaPredicted RBP19.77■□□□□ 0.75
SPAST-202ENST00000345662 ARHGAP25P42331 645 aa19.76■□□□□ 0.75
SPAST-202ENST00000345662 PAIP2Q9BPZ3 127 aaKnown RBP19.76■□□□□ 0.75
SPAST-202ENST00000345662 CARD14Q9BXL6 1004 aa19.76■□□□□ 0.75
SPAST-202ENST00000345662 PA2G4Q9UQ80 394 aaKnown RBP19.76■□□□□ 0.75
SPAST-202ENST00000345662 ARHGEF12Q9NZN5 1544 aa19.76■□□□□ 0.75
SPAST-202ENST00000345662 MSH6P52701 1360 aa19.76■□□□□ 0.75
SPAST-202ENST00000345662 COL17A1Q9UMD9 1497 aaPredicted RBP19.76■□□□□ 0.75
SPAST-202ENST00000345662 ZC3H6P61129 1189 aaKnown RBP19.76■□□□□ 0.75
SPAST-202ENST00000345662 HOMER2Q9NSB8 354 aa19.76■□□□□ 0.75
SPAST-202ENST00000345662 CEP83Q9Y592 693 aa19.76■□□□□ 0.75
SPAST-202ENST00000345662 EIF2AK4Q9P2K8 1649 aaKnown RBP19.76■□□□□ 0.75
SPAST-202ENST00000345662 KAT14Q9H8E8 782 aa19.76■□□□□ 0.75
SPAST-202ENST00000345662 BICDL2A1A5D9 508 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 LACTBP83111 547 aaPredicted RBP19.75■□□□□ 0.75
SPAST-202ENST00000345662 GPT2Q8TD30 523 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 ASIC1P78348 528 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 TRIM14Q14142 442 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
SPAST-202ENST00000345662 TNIP1Q15025 636 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 ERCC6LQ2NKX8 1250 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 CHST3Q7LGC8 479 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 DZIP1Q86YF9 867 aaKnown RBP19.75■□□□□ 0.75
SPAST-202ENST00000345662 PAF1Q8N7H5 531 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 TSPY2A6NKD2 308 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 ZSCAN29Q8IWY8 852 aaPredicted RBP19.75■□□□□ 0.75
SPAST-202ENST00000345662 LLPHQ9BRT6 129 aaKnown RBP19.75■□□□□ 0.75
SPAST-202ENST00000345662 AOX1Q06278 1338 aa19.75■□□□□ 0.75
SPAST-202ENST00000345662 CCDC50Q8IVM0 306 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 PAG1Q9NWQ8 432 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 TRMT112Q9UI30 125 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms