RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 LDHAL6AQ6ZMR3 332 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 DACT1Q9NYF0 836 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 PTPDC1A2A3K4 754 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 PFKFB2O60825 505 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 RESTQ13127 1097 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 TRIM28Q13263 835 aaKnown RBP17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 NLRP10Q86W26 655 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 NUP62CLQ9H1M0 184 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 GPHNQ9NQX3 736 aaPredicted RBP17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 ELP1O95163 1332 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 EXOSC10Q01780 885 aaKnown RBP17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 ATP2B3Q16720 1220 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 UVSSAQ2YD98 709 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 NSUN7Q8NE18 718 aaKnown RBP17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 BICD2Q8TD16 824 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 ZNF830Q96NB3 372 aaPredicted RBP17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 CNNM1Q9NRU3 951 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 TBC1D2BQ9UPU7 963 aa17.57■□□□□ 0.4
VIPAS39-202ENST00000343765 CTDNEP1O95476 244 aa17.56■□□□□ 0.4
VIPAS39-202ENST00000343765 GUCY1B3Q02153 619 aa17.56■□□□□ 0.4
VIPAS39-202ENST00000343765 CSF1RP07333 972 aa17.56■□□□□ 0.4
VIPAS39-202ENST00000343765 TRMT112Q9UI30 125 aaKnown RBP17.56■□□□□ 0.4
VIPAS39-202ENST00000343765 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
VIPAS39-202ENST00000343765 PUS7LQ9H0K6 701 aaKnown RBP17.55■□□□□ 0.4
VIPAS39-202ENST00000343765 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
VIPAS39-202ENST00000343765 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
VIPAS39-202ENST00000343765 CCDC192P0DO97 292 aa17.55■□□□□ 0.4
VIPAS39-202ENST00000343765 CYP19A1P11511 503 aaPredicted RBP17.55■□□□□ 0.4
VIPAS39-202ENST00000343765 MAP3K11Q16584 847 aa17.55■□□□□ 0.4
VIPAS39-202ENST00000343765 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
VIPAS39-202ENST00000343765 FTOQ9C0B1 505 aaKnown RBP eCLIP17.55■□□□□ 0.4
VIPAS39-202ENST00000343765 FOXP2O15409 715 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 OFD1O75665 1012 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 CTSWP56202 376 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 RAB11FIP4Q86YS3 637 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 SMARCC2Q8TAQ2 1214 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 PGBD1Q96JS3 809 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 PLA2G12BQ9BX93 195 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 TNMDQ9H2S6 317 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 FAM177BA6PVY3 158 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 ZNF500O60304 480 aaPredicted RBP17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 RIC1Q4ADV7 1423 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 LAMA4Q16363 1823 aa17.54■□□□□ 0.4
VIPAS39-202ENST00000343765 KDM4AO75164 1064 aa17.53■□□□□ 0.4
VIPAS39-202ENST00000343765 NR1I2O75469 434 aa17.53■□□□□ 0.4
VIPAS39-202ENST00000343765 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
VIPAS39-202ENST00000343765 MCAMP43121 646 aa17.53■□□□□ 0.4
VIPAS39-202ENST00000343765 LRRFIP1Q32MZ4 808 aaKnown RBP17.53■□□□□ 0.4
VIPAS39-202ENST00000343765 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
VIPAS39-202ENST00000343765 ANKRD18BA2A2Z9 1011 aa17.53■□□□□ 0.4
VIPAS39-202ENST00000343765 FGAP02671 866 aa17.53■□□□□ 0.4
VIPAS39-202ENST00000343765 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.53■□□□□ 0.4
VIPAS39-202ENST00000343765 LLPHQ9BRT6 129 aaKnown RBP17.53■□□□□ 0.4
VIPAS39-202ENST00000343765 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.52■□□□□ 0.4
VIPAS39-202ENST00000343765 IMMTQ16891 758 aaKnown RBP17.52■□□□□ 0.4
VIPAS39-202ENST00000343765 FBXO3Q9UK99 471 aa17.52■□□□□ 0.4
VIPAS39-202ENST00000343765 AP5Z1O43299 807 aa17.52■□□□□ 0.4
VIPAS39-202ENST00000343765 TYRO3Q06418 890 aa17.52■□□□□ 0.4
VIPAS39-202ENST00000343765 HELBQ8NG08 1087 aaPredicted RBP17.52■□□□□ 0.4
VIPAS39-202ENST00000343765 APPBP2Q92624 585 aa17.52■□□□□ 0.4
VIPAS39-202ENST00000343765 R3HCC1Q9Y3T6 440 aaKnown RBP17.52■□□□□ 0.4
VIPAS39-202ENST00000343765 EXOC5O00471 708 aa17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 GPAA1O43292 621 aa17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 ZFYP08048 801 aaPredicted RBP17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 DZIP3Q86Y13 1208 aaKnown RBP17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 ZSCAN16Q9H4T2 348 aaPredicted RBP17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 TTC12Q9H892 705 aaPredicted RBP17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 BCL9O00512 1426 aa17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 AGXT2Q9BYV1 514 aa17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 CTNNA3Q9UI47 895 aa17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 TAOK2Q9UL54 1235 aa17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 IDH1O75874 414 aaKnown RBP17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 HMGN5P82970 282 aaKnown RBP17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 MRVI1Q9Y6F6 885 aa17.51■□□□□ 0.39
VIPAS39-202ENST00000343765 CDHR2Q9BYE9 1310 aa17.5■□□□□ 0.39
VIPAS39-202ENST00000343765 MCM5P33992 734 aa17.5■□□□□ 0.39
VIPAS39-202ENST00000343765 PRC1O43663 620 aa17.5■□□□□ 0.39
VIPAS39-202ENST00000343765 SLC9C2Q5TAH2 1124 aa17.5■□□□□ 0.39
VIPAS39-202ENST00000343765 LUZP1Q86V48 1076 aa17.5■□□□□ 0.39
VIPAS39-202ENST00000343765 CFAP45Q9UL16 551 aa17.5■□□□□ 0.39
VIPAS39-202ENST00000343765 UBN2Q6ZU65 1347 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 ITGB4P16144 1822 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 SPC24Q8NBT2 197 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 DDX19AQ9NUU7 478 aaKnown RBP17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 KIF3AQ9Y496 699 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 NHSL1Q5SYE7 1610 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 SNAP23O00161 211 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 PHKA1P46020 1223 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 ANO6Q4KMQ2 910 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 OTUD7BQ6GQQ9 843 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 NAA16Q6N069 864 aaPredicted RBP17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 TICAM2Q86XR7 235 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 ZNF274Q96GC6 653 aaPredicted RBP17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 CLSTN2Q9H4D0 955 aa17.49■□□□□ 0.39
VIPAS39-202ENST00000343765 KLF18A0A0U1RQI7 1052 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 GOLGA8BA8MQT2 603 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 ZNF213O14771 459 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 APPP05067 770 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms