RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 DBF4Q9UBU7 674 aaPredicted RBP11.25□□□□□ -0.61
HOXA1-201ENST00000343060 MAP3K2Q9Y2U5 619 aa11.25□□□□□ -0.61
HOXA1-201ENST00000343060 RGPD8O14715 1765 aaPredicted RBP11.24□□□□□ -0.61
HOXA1-201ENST00000343060 VGLL3A8MV65 326 aa11.24□□□□□ -0.61
HOXA1-201ENST00000343060 IKBKBO14920 756 aa11.24□□□□□ -0.61
HOXA1-201ENST00000343060 NPHP1O15259 732 aa11.24□□□□□ -0.61
HOXA1-201ENST00000343060 FANCGO15287 622 aa11.24□□□□□ -0.61
HOXA1-201ENST00000343060 TBC1D8O95759 1140 aa11.24□□□□□ -0.61
HOXA1-201ENST00000343060 HMGB1P09429 215 aaKnown RBP11.24□□□□□ -0.61
HOXA1-201ENST00000343060 LRRFIP1Q32MZ4 808 aaKnown RBP11.24□□□□□ -0.61
HOXA1-201ENST00000343060 GRM8O00222 908 aa11.24□□□□□ -0.61
HOXA1-201ENST00000343060 SMC2O95347 1197 aa11.24□□□□□ -0.61
HOXA1-201ENST00000343060 CYP21A2P08686 494 aa11.24□□□□□ -0.61
HOXA1-201ENST00000343060 HSP90B1P14625 803 aaKnown RBP11.24□□□□□ -0.61
HOXA1-201ENST00000343060 PCDHA7Q9UN72 937 aa11.24□□□□□ -0.61
HOXA1-201ENST00000343060 PARP3Q9Y6F1 533 aa11.24□□□□□ -0.61
HOXA1-201ENST00000343060 ANKARQ7Z5J8 1434 aa11.23□□□□□ -0.61
HOXA1-201ENST00000343060 ATP5JP18859 108 aa11.23□□□□□ -0.61
HOXA1-201ENST00000343060 ME1P48163 572 aa11.23□□□□□ -0.61
HOXA1-201ENST00000343060 NLRP12P59046 1061 aa11.23□□□□□ -0.61
HOXA1-201ENST00000343060 REXO1L1PQ8IX06 675 aa11.23□□□□□ -0.61
HOXA1-201ENST00000343060 NFATC2IPQ8NCF5 419 aa11.23□□□□□ -0.61
HOXA1-201ENST00000343060 LINS1Q8NG48 757 aa11.23□□□□□ -0.61
HOXA1-201ENST00000343060 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
HOXA1-201ENST00000343060 ANXA1P04083 346 aa11.23□□□□□ -0.61
HOXA1-201ENST00000343060 STOX1Q6ZVD7 989 aa11.23□□□□□ -0.61
HOXA1-201ENST00000343060 PSD3Q9NYI0 1048 aa11.23□□□□□ -0.61
HOXA1-201ENST00000343060 KCNQ3O43525 872 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 SASH3O75995 380 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 YEATS4O95619 227 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 EXOSC10Q01780 885 aaKnown RBP11.22□□□□□ -0.61
HOXA1-201ENST00000343060 CC2D1AQ6P1N0 951 aaPredicted RBP11.22□□□□□ -0.61
HOXA1-201ENST00000343060 DHX32Q7L7V1 743 aaKnown RBP11.22□□□□□ -0.61
HOXA1-201ENST00000343060 LINC00301Q8NCQ3 95 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 MNS1Q8NEH6 495 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 HSD3B7Q9H2F3 369 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 SH3TC1Q8TE82 1336 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 SIPA1L3O60292 1781 aaPredicted RBP11.22□□□□□ -0.61
HOXA1-201ENST00000343060 LTN1O94822 1766 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 LMTK3Q96Q04 1460 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 NDUFA8P51970 172 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 GPR161Q8N6U8 529 aaKnown RBP11.22□□□□□ -0.61
HOXA1-201ENST00000343060 NEK11Q8NG66 645 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 MPHOSPH8Q99549 860 aa11.22□□□□□ -0.61
HOXA1-201ENST00000343060 CARMIL3Q8ND23 1372 aa11.21□□□□□ -0.61
HOXA1-201ENST00000343060 PHRF1Q9P1Y6 1649 aaKnown RBP11.21□□□□□ -0.61
HOXA1-201ENST00000343060 MYO1BO43795 1136 aa11.21□□□□□ -0.61
HOXA1-201ENST00000343060 OAS2P29728 719 aaKnown RBP11.21□□□□□ -0.61
HOXA1-201ENST00000343060 FANCCQ00597 558 aa11.21□□□□□ -0.61
HOXA1-201ENST00000343060 CWF19L2Q2TBE0 894 aaKnown RBP11.21□□□□□ -0.61
HOXA1-201ENST00000343060 RSRC2Q7L4I2 434 aaKnown RBP11.21□□□□□ -0.61
HOXA1-201ENST00000343060 HOMER1Q86YM7 354 aa11.21□□□□□ -0.61
HOXA1-201ENST00000343060 IQUBQ8NA54 791 aa11.21□□□□□ -0.61
HOXA1-201ENST00000343060 KCNG4Q8TDN1 519 aa11.21□□□□□ -0.61
HOXA1-201ENST00000343060 ERCC4Q92889 916 aaPredicted RBP11.21□□□□□ -0.61
HOXA1-201ENST00000343060 SMARCE1Q969G3 411 aa11.21□□□□□ -0.61
HOXA1-201ENST00000343060 CHMP4CQ96CF2 233 aa11.21□□□□□ -0.61
HOXA1-201ENST00000343060 SDF4Q9BRK5 362 aa11.21□□□□□ -0.61
HOXA1-201ENST00000343060 POLR3EQ9NVU0 708 aa11.21□□□□□ -0.61
HOXA1-201ENST00000343060 EVCP57679 992 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 ST5P78524 1137 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 GPS2Q13227 327 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 TICAM2Q86XR7 235 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 FBXL16Q8N461 479 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 SYTL4Q96C24 671 aaPredicted RBP11.2□□□□□ -0.62
HOXA1-201ENST00000343060 CARD6Q9BX69 1037 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 LGR6Q9HBX8 967 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 TNRQ92752 1358 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 DDX60Q8IY21 1712 aaKnown RBP11.2□□□□□ -0.62
HOXA1-201ENST00000343060 VWA3AA6NCI4 1184 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 SEC31AO94979 1220 aaKnown RBP11.2□□□□□ -0.62
HOXA1-201ENST00000343060 PROSER3Q2NL68 480 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 PLPPR3Q6T4P5 718 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 TMEM139Q8IV31 216 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 EXOC4Q96A65 974 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 EDC3Q96F86 508 aaKnown RBP11.2□□□□□ -0.62
HOXA1-201ENST00000343060 ZNF274Q96GC6 653 aaPredicted RBP11.2□□□□□ -0.62
HOXA1-201ENST00000343060 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 ADAMTS7Q9UKP4 1686 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 PALLDQ8WX93 1383 aa11.2□□□□□ -0.62
HOXA1-201ENST00000343060 A0A1B0GVL5 298 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 POLR3GO15318 223 aaPredicted RBP11.19□□□□□ -0.62
HOXA1-201ENST00000343060 CBFA2T2O43439 604 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 SLC3A2P08195 630 aaKnown RBP11.19□□□□□ -0.62
HOXA1-201ENST00000343060 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 SMC1AQ14683 1233 aaKnown RBP11.19□□□□□ -0.62
HOXA1-201ENST00000343060 VSTM4Q8IW00 320 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 DBNLQ9UJU6 430 aaKnown RBP11.19□□□□□ -0.62
HOXA1-201ENST00000343060 NFAT5O94916 1531 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 GOLGA6L9A6NEM1 432 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 ZSCAN12O43309 604 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 URI1O94763 535 aaPredicted RBP11.19□□□□□ -0.62
HOXA1-201ENST00000343060 NLRP6P59044 892 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 APOBRQ0VD83 1088 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 ZRSR1Q15695 479 aaKnown RBP11.19□□□□□ -0.62
HOXA1-201ENST00000343060 GORABQ5T7V8 394 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 MSL3Q8N5Y2 521 aaKnown RBP11.19□□□□□ -0.62
HOXA1-201ENST00000343060 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
HOXA1-201ENST00000343060 NGDNQ8NEJ9 315 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms