RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 DDX19AQ9NUU7 478 aaKnown RBP8.57□□□□□ -1.04
PTPRR-202ENST00000342084 CWC25Q9NXE8 425 aaPredicted RBP8.57□□□□□ -1.04
PTPRR-202ENST00000342084 TJP1Q07157 1748 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 SH3TC1Q8TE82 1336 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 TMEM94Q12767 1356 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 A0A1B0GUL7 405 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 PFKFB2O60825 505 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 IFIT1P09914 478 aaKnown RBP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 HSPD1P10809 573 aaKnown RBP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 ZNF165P49910 485 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 FKBP4Q02790 459 aaKnown RBP eCLIP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 CCDC144BQ3MJ40 725 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 DHX32Q7L7V1 743 aaKnown RBP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 IFNLR1Q8IU57 520 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 CCAR1Q8IX12 1150 aaKnown RBP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 CCDC144CPQ8IYA2 1237 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 BBXQ8WY36 941 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 USP28Q96RU2 1077 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 BCL11BQ9C0K0 894 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 RFX7Q2KHR2 1363 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 PALLDQ8WX93 1383 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 LAMB4A4D0S4 1761 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 RIOK3O14730 519 aaKnown RBP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 SCARF1Q14162 830 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 ARID5BQ14865 1188 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 ZMYM1Q5SVZ6 1142 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 PI16Q6UXB8 463 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 RBM43Q6ZSC3 357 aaKnown RBP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 ILDR1Q86SU0 546 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 PLA2G4DQ86XP0 818 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 OSBP2Q969R2 916 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 GJB4Q9NTQ9 266 aa8.56□□□□□ -1.04
PTPRR-202ENST00000342084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.56□□□□□ -1.04
PTPRR-202ENST00000342084 PKD1L3Q7Z443 1732 aa8.55□□□□□ -1.04
PTPRR-202ENST00000342084 GOLGA6L6A8MZA4 724 aa8.55□□□□□ -1.04
PTPRR-202ENST00000342084 EYA2O00167 538 aa8.55□□□□□ -1.04
PTPRR-202ENST00000342084 PDIA3P30101 505 aaKnown RBP8.55□□□□□ -1.04
PTPRR-202ENST00000342084 EXOSC10Q01780 885 aaKnown RBP8.55□□□□□ -1.04
PTPRR-202ENST00000342084 KLHL34Q8N239 644 aa8.55□□□□□ -1.04
PTPRR-202ENST00000342084 TDRD7Q8NHU6 1098 aaKnown RBP8.55□□□□□ -1.04
PTPRR-202ENST00000342084 PRIMPOLQ96LW4 560 aa8.55□□□□□ -1.04
PTPRR-202ENST00000342084 PRDM10Q9NQV6 1147 aa8.55□□□□□ -1.04
PTPRR-202ENST00000342084 FOXP2O15409 715 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 RNF113AO15541 343 aaKnown RBP8.54□□□□□ -1.04
PTPRR-202ENST00000342084 IL15P40933 162 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-202ENST00000342084 MAPK8IP2Q13387 824 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-202ENST00000342084 WASHC4Q2M389 1173 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 ZSCAN25Q6NSZ9 544 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 C16orf45Q96MC5 204 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-202ENST00000342084 DSCC1Q9BVC3 393 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 ZSCAN16Q9H4T2 348 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-202ENST00000342084 BCL2L12Q9HB09 334 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 HELLSQ9NRZ9 838 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 PLEKHG2Q9H7P9 1386 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 TNS3Q68CZ2 1445 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 NUP188Q5SRE5 1749 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 XIRP1Q702N8 1843 aaKnown RBP8.54□□□□□ -1.04
PTPRR-202ENST00000342084 FDPSP14324 419 aaKnown RBP8.54□□□□□ -1.04
PTPRR-202ENST00000342084 HMGN5P82970 282 aaKnown RBP8.54□□□□□ -1.04
PTPRR-202ENST00000342084 TOM1L2Q6ZVM7 507 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 SYNE4Q8N205 404 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 NKX2-3Q8TAU0 364 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 CACTINQ8WUQ7 758 aaKnown RBP8.54□□□□□ -1.04
PTPRR-202ENST00000342084 CLIP2Q9UDT6 1046 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 CFAP45Q9UL16 551 aa8.54□□□□□ -1.04
PTPRR-202ENST00000342084 PDIA4P13667 645 aaKnown RBP8.53□□□□□ -1.04
PTPRR-202ENST00000342084 ME1P48163 572 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 SNW1Q13573 536 aaKnown RBP8.53□□□□□ -1.04
PTPRR-202ENST00000342084 IQCB1Q15051 598 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 TTC39AQ5SRH9 613 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 NAA16Q6N069 864 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-202ENST00000342084 FSIP1Q8NA03 581 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 FAM89AQ96GI7 184 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 LLPHQ9BRT6 129 aaKnown RBP8.53□□□□□ -1.04
PTPRR-202ENST00000342084 DENND2AQ9ULE3 1009 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 KIF3AQ9Y496 699 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 SALL1Q9NSC2 1324 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 CARMIL3Q8ND23 1372 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 KCPQ6ZWJ8 1503 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 A0A1B0GVL5 298 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 POLR3DP05423 398 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-202ENST00000342084 HMGB1P09429 215 aaKnown RBP8.53□□□□□ -1.04
PTPRR-202ENST00000342084 GTF2F1P35269 517 aaKnown RBP eCLIP8.53□□□□□ -1.04
PTPRR-202ENST00000342084 ZAP70P43403 619 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 VASPP50552 380 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-202ENST00000342084 GORABQ5T7V8 394 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 ZCRB1Q8TBF4 217 aaKnown RBP8.53□□□□□ -1.04
PTPRR-202ENST00000342084 MAP7D2Q96T17 732 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 RNF216Q9NWF9 866 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-202ENST00000342084 FBXO3Q9UK99 471 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 RCOR1Q9UKL0 485 aa8.53□□□□□ -1.04
PTPRR-202ENST00000342084 SPATA31A3Q5VYP0 1347 aa8.52□□□□□ -1.04
PTPRR-202ENST00000342084 MYH15Q9Y2K3 1946 aa8.52□□□□□ -1.04
PTPRR-202ENST00000342084 NWD2Q9ULI1 1742 aa8.52□□□□□ -1.05
PTPRR-202ENST00000342084 USP27XA6NNY8 438 aa8.52□□□□□ -1.05
PTPRR-202ENST00000342084 GOLGA6L19H0YKK7 550 aa8.52□□□□□ -1.05
PTPRR-202ENST00000342084 TPM3P06753 285 aa8.52□□□□□ -1.05
PTPRR-202ENST00000342084 STX1AQ16623 288 aa8.52□□□□□ -1.05
PTPRR-202ENST00000342084 CCDC73Q6ZRK6 1079 aa8.52□□□□□ -1.05
PTPRR-202ENST00000342084 DHX40Q8IX18 779 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms