RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 DDX17Q92841 729 aaKnown RBP24.19■■□□□ 1.46
CLPB-202ENST00000340729 BPIFA3Q9BQP9 254 aa24.19■■□□□ 1.46
CLPB-202ENST00000340729 PALLDQ8WX93 1383 aa24.18■■□□□ 1.46
CLPB-202ENST00000340729 DCCP43146 1447 aa24.18■■□□□ 1.46
CLPB-202ENST00000340729 EXOSC10Q01780 885 aaKnown RBP24.18■■□□□ 1.46
CLPB-202ENST00000340729 PTPN12Q05209 780 aaKnown RBP24.18■■□□□ 1.46
CLPB-202ENST00000340729 ZNF215Q9UL58 517 aaPredicted RBP24.18■■□□□ 1.46
CLPB-202ENST00000340729 USP16Q9Y5T5 823 aa24.18■■□□□ 1.46
CLPB-202ENST00000340729 TUBB4AP04350 444 aa24.17■■□□□ 1.46
CLPB-202ENST00000340729 AIMP1Q12904 312 aaKnown RBP24.17■■□□□ 1.46
CLPB-202ENST00000340729 STOX1Q6ZVD7 989 aa24.17■■□□□ 1.46
CLPB-202ENST00000340729 KRT222Q8N1A0 295 aa24.17■■□□□ 1.46
CLPB-202ENST00000340729 ZNF592Q92610 1267 aa24.17■■□□□ 1.46
CLPB-202ENST00000340729 DSCC1Q9BVC3 393 aa24.17■■□□□ 1.46
CLPB-202ENST00000340729 C5P01031 1676 aa24.17■■□□□ 1.46
CLPB-202ENST00000340729 A0A1W2PQ27 194 aa24.17■■□□□ 1.46
CLPB-202ENST00000340729 A0A1W2PQ64 194 aa24.17■■□□□ 1.46
CLPB-202ENST00000340729 A0A1W2PQD8 194 aa24.17■■□□□ 1.46
CLPB-202ENST00000340729 KBTBD3Q8NAB2 608 aa24.17■■□□□ 1.46
CLPB-202ENST00000340729 ATF3P18847 181 aa24.16■■□□□ 1.46
CLPB-202ENST00000340729 FAM193AP78312 1265 aa24.16■■□□□ 1.46
CLPB-202ENST00000340729 CEBPZQ03701 1054 aaKnown RBP24.16■■□□□ 1.46
CLPB-202ENST00000340729 KMT5BQ4FZB7 885 aa24.16■■□□□ 1.46
CLPB-202ENST00000340729 HELLSQ9NRZ9 838 aa24.16■■□□□ 1.46
CLPB-202ENST00000340729 STRCQ7RTU9 1775 aa24.16■■□□□ 1.46
CLPB-202ENST00000340729 SLU7O95391 586 aaKnown RBP24.15■■□□□ 1.46
CLPB-202ENST00000340729 FGD1P98174 961 aa24.15■■□□□ 1.46
CLPB-202ENST00000340729 TFCP2Q12800 502 aa24.15■■□□□ 1.46
CLPB-202ENST00000340729 CCDC129Q6ZRS4 1044 aa24.15■■□□□ 1.46
CLPB-202ENST00000340729 FMR1NBQ8N0W7 255 aaPredicted RBP24.15■■□□□ 1.46
CLPB-202ENST00000340729 FBXL16Q8N461 479 aa24.15■■□□□ 1.46
CLPB-202ENST00000340729 ZNF274Q96GC6 653 aaPredicted RBP24.15■■□□□ 1.46
CLPB-202ENST00000340729 SLFN14P0C7P3 912 aa24.15■■□□□ 1.46
CLPB-202ENST00000340729 FSIP1Q8NA03 581 aa24.15■■□□□ 1.46
CLPB-202ENST00000340729 AXIN2Q9Y2T1 843 aa24.15■■□□□ 1.46
CLPB-202ENST00000340729 ADALQ6DHV7 355 aa24.14■■□□□ 1.46
CLPB-202ENST00000340729 FILIP1Q7Z7B0 1213 aa24.14■■□□□ 1.46
CLPB-202ENST00000340729 CCDC150Q8NCX0 1101 aa24.14■■□□□ 1.46
CLPB-202ENST00000340729 MRPS27Q92552 414 aaKnown RBP24.14■■□□□ 1.46
CLPB-202ENST00000340729 L2HGDHQ9H9P8 463 aa24.14■■□□□ 1.46
CLPB-202ENST00000340729 RTEL1Q9NZ71 1219 aa24.14■■□□□ 1.46
CLPB-202ENST00000340729 PSDA5PKW4 1024 aaPredicted RBP24.14■■□□□ 1.45
CLPB-202ENST00000340729 NBPF11Q86T75 865 aa24.14■■□□□ 1.45
CLPB-202ENST00000340729 AOPEPQ8N6M6 819 aa24.14■■□□□ 1.45
CLPB-202ENST00000340729 ANKRD24Q8TF21 1146 aa24.14■■□□□ 1.45
CLPB-202ENST00000340729 SEC62Q99442 399 aaKnown RBP24.14■■□□□ 1.45
CLPB-202ENST00000340729 FTOQ9C0B1 505 aaKnown RBP eCLIP24.14■■□□□ 1.45
CLPB-202ENST00000340729 ILDR1Q86SU0 546 aaPredicted RBP24.13■■□□□ 1.45
CLPB-202ENST00000340729 ERBB3P21860 1342 aa24.12■■□□□ 1.45
CLPB-202ENST00000340729 ZNF771Q7L3S4 317 aaPredicted RBP24.12■■□□□ 1.45
CLPB-202ENST00000340729 MYD88Q99836 296 aa24.12■■□□□ 1.45
CLPB-202ENST00000340729 ME1P48163 572 aa24.12■■□□□ 1.45
CLPB-202ENST00000340729 ZNF790Q6PG37 636 aa24.12■■□□□ 1.45
CLPB-202ENST00000340729 CREBRFQ8IUR6 639 aa24.12■■□□□ 1.45
CLPB-202ENST00000340729 XAGE3Q8WTP9 111 aa24.12■■□□□ 1.45
CLPB-202ENST00000340729 DNAJC2Q99543 621 aaKnown RBP24.12■■□□□ 1.45
CLPB-202ENST00000340729 DBNDD2Q9BQY9 259 aa24.12■■□□□ 1.45
CLPB-202ENST00000340729 LRRC2Q9BYS8 371 aa24.12■■□□□ 1.45
CLPB-202ENST00000340729 COL18A1P39060 1754 aa24.11■■□□□ 1.45
CLPB-202ENST00000340729 SCN11AQ9UI33 1791 aa24.11■■□□□ 1.45
CLPB-202ENST00000340729 EVCP57679 992 aa24.11■■□□□ 1.45
CLPB-202ENST00000340729 APOBRQ0VD83 1088 aa24.11■■□□□ 1.45
CLPB-202ENST00000340729 CARMIL3Q8ND23 1372 aa24.11■■□□□ 1.45
CLPB-202ENST00000340729 TERF2Q15554 542 aa24.11■■□□□ 1.45
CLPB-202ENST00000340729 PCDHA7Q9UN72 937 aa24.11■■□□□ 1.45
CLPB-202ENST00000340729 AFDNP55196 1824 aaKnown RBP24.1■■□□□ 1.45
CLPB-202ENST00000340729 FBXO38Q6PIJ6 1188 aa24.1■■□□□ 1.45
CLPB-202ENST00000340729 COPS6Q7L5N1 327 aa24.1■■□□□ 1.45
CLPB-202ENST00000340729 LRP10Q7Z4F1 713 aa24.1■■□□□ 1.45
CLPB-202ENST00000340729 PDIA3P30101 505 aaKnown RBP24.09■■□□□ 1.45
CLPB-202ENST00000340729 ZC3H6P61129 1189 aaKnown RBP24.09■■□□□ 1.45
CLPB-202ENST00000340729 KIAA1468Q9P260 1216 aa24.09■■□□□ 1.45
CLPB-202ENST00000340729 SPEF2Q9C093 1822 aa24.09■■□□□ 1.45
CLPB-202ENST00000340729 ZMYM1Q5SVZ6 1142 aa24.09■■□□□ 1.45
CLPB-202ENST00000340729 E4F1Q66K89 784 aaPredicted RBP24.09■■□□□ 1.45
CLPB-202ENST00000340729 ANKRD13DQ6ZTN6 518 aa24.09■■□□□ 1.45
CLPB-202ENST00000340729 RGS22Q8NE09 1264 aa24.09■■□□□ 1.45
CLPB-202ENST00000340729 GPR108Q9NPR9 543 aa24.09■■□□□ 1.45
CLPB-202ENST00000340729 TRMT1Q9NXH9 659 aaKnown RBP24.09■■□□□ 1.45
CLPB-202ENST00000340729 YEATS4O95619 227 aa24.08■■□□□ 1.45
CLPB-202ENST00000340729 ELF2Q15723 593 aa24.08■■□□□ 1.45
CLPB-202ENST00000340729 DDX46Q7L014 1031 aaKnown RBP24.08■■□□□ 1.45
CLPB-202ENST00000340729 LINC00301Q8NCQ3 95 aa24.08■■□□□ 1.45
CLPB-202ENST00000340729 KCNG4Q8TDN1 519 aa24.08■■□□□ 1.45
CLPB-202ENST00000340729 E7EWF7 191 aa24.07■■□□□ 1.44
CLPB-202ENST00000340729 CHGBP05060 677 aa24.07■■□□□ 1.44
CLPB-202ENST00000340729 CCDC93Q567U6 631 aa24.07■■□□□ 1.44
CLPB-202ENST00000340729 SDF4Q9BRK5 362 aa24.07■■□□□ 1.44
CLPB-202ENST00000340729 POLR3EQ9NVU0 708 aa24.07■■□□□ 1.44
CLPB-202ENST00000340729 NDUFB9Q9Y6M9 179 aa24.07■■□□□ 1.44
CLPB-202ENST00000340729 NEDD4P46934 1319 aa24.07■■□□□ 1.44
CLPB-202ENST00000340729 H2AFXP16104 143 aaPredicted RBP24.07■■□□□ 1.44
CLPB-202ENST00000340729 SLC52A2Q9HAB3 445 aa24.07■■□□□ 1.44
CLPB-202ENST00000340729 ARFGEF2Q9Y6D5 1785 aa24.06■■□□□ 1.44
CLPB-202ENST00000340729 NRDCO43847 1150 aa24.06■■□□□ 1.44
CLPB-202ENST00000340729 CCT2P78371 535 aaKnown RBP24.06■■□□□ 1.44
CLPB-202ENST00000340729 PPP1R13BQ96KQ4 1090 aa24.06■■□□□ 1.44
CLPB-202ENST00000340729 TNS3Q68CZ2 1445 aa24.06■■□□□ 1.44
CLPB-202ENST00000340729 IGSF3O75054 1194 aa24.06■■□□□ 1.44
CLPB-202ENST00000340729 MYL6BP14649 208 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms