RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 UPP2O95045 317 aa13.64□□□□□ -0.23
TPX2-202ENST00000340513 TSC22D3Q99576 134 aa13.64□□□□□ -0.23
TPX2-202ENST00000340513 UPF3BQ9BZI7 483 aaKnown RBP13.64□□□□□ -0.23
TPX2-202ENST00000340513 PUF60Q9UHX1 559 aaKnown RBP13.64□□□□□ -0.23
TPX2-202ENST00000340513 NEXNQ0ZGT2 675 aa13.64□□□□□ -0.23
TPX2-202ENST00000340513 TRIM11Q96F44 468 aa13.64□□□□□ -0.23
TPX2-202ENST00000340513 SMAPO00193 183 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 NDUFAB1O14561 156 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 RNF40O75150 1001 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 RHOXF2BP0C7M4 288 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 RHOXF2Q9BQY4 288 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 LRRCC1Q9C099 1032 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 DDX19BQ9UMR2 479 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 RIPOR2Q9Y4F9 1068 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 PAPOLAP51003 745 aaKnown RBP13.63□□□□□ -0.23
TPX2-202ENST00000340513 ETF1P62495 437 aaKnown RBP13.63□□□□□ -0.23
TPX2-202ENST00000340513 CCDC40Q4G0X9 1142 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 TCP11Q8WWU5 503 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 PAPOLBQ9NRJ5 636 aaKnown RBP13.63□□□□□ -0.23
TPX2-202ENST00000340513 BUB1BO60566 1050 aaPredicted RBP13.63□□□□□ -0.23
TPX2-202ENST00000340513 RAPGEF3O95398 923 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 CNGA1P29973 690 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 GNG11P61952 73 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 RBM26Q5T8P6 1007 aaKnown RBP13.63□□□□□ -0.23
TPX2-202ENST00000340513 DZIP1Q86YF9 867 aaKnown RBP13.63□□□□□ -0.23
TPX2-202ENST00000340513 GBP3Q9H0R5 595 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 UNC45AQ9H3U1 944 aa13.63□□□□□ -0.23
TPX2-202ENST00000340513 TPX2Q9ULW0 747 aaKnown RBP13.63□□□□□ -0.23
TPX2-202ENST00000340513 ZSCAN12O43309 604 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 GJA8P48165 433 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 TRAIPQ9BWF2 469 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 RTEL1Q9NZ71 1219 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 FYCO1Q9BQS8 1478 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 GNAT1P11488 350 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 XBP1P17861 261 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 SFPQP23246 707 aaKnown RBP eCLIP13.62□□□□□ -0.23
TPX2-202ENST00000340513 DDR1Q08345 913 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.62□□□□□ -0.23
TPX2-202ENST00000340513 TMEM57Q8N5G2 664 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 GOLGA1Q92805 767 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 GDAP1L1Q96MZ0 367 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 EHD4Q9H223 541 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 AATFQ9NY61 560 aaKnown RBP eCLIP13.62□□□□□ -0.23
TPX2-202ENST00000340513 HDAC6Q9UBN7 1215 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 ANKRD30AQ9BXX3 1397 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 MYO1EQ12965 1108 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 PKD2Q13563 968 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 FAM71BQ8TC56 605 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 TSR2Q969E8 191 aaKnown RBP13.62□□□□□ -0.23
TPX2-202ENST00000340513 RABL2BQ9UNT1 228 aa13.62□□□□□ -0.23
TPX2-202ENST00000340513 TTC37Q6PGP7 1564 aa13.61□□□□□ -0.23
TPX2-202ENST00000340513 RASA3Q14644 834 aa13.61□□□□□ -0.23
TPX2-202ENST00000340513 FILIP1LQ4L180 1135 aa13.61□□□□□ -0.23
TPX2-202ENST00000340513 ANKIB1Q9P2G1 1089 aa13.61□□□□□ -0.23
TPX2-202ENST00000340513 BAIAP2L1Q9UHR4 511 aa13.61□□□□□ -0.23
TPX2-202ENST00000340513 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
TPX2-202ENST00000340513 VPS37CA5D8V6 355 aaPredicted RBP13.61□□□□□ -0.23
TPX2-202ENST00000340513 M0R2C6 588 aa13.61□□□□□ -0.23
TPX2-202ENST00000340513 KBTBD12Q3ZCT8 623 aa13.61□□□□□ -0.23
TPX2-202ENST00000340513 SDCCAG8Q86SQ7 713 aaPredicted RBP13.61□□□□□ -0.23
TPX2-202ENST00000340513 THUMPD2Q9BTF0 503 aaKnown RBP13.61□□□□□ -0.23
TPX2-202ENST00000340513 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
TPX2-202ENST00000340513 TRIM27P14373 513 aa13.6□□□□□ -0.23
TPX2-202ENST00000340513 RBM12BQ8IXT5 1001 aaKnown RBP13.6□□□□□ -0.23
TPX2-202ENST00000340513 CENPOQ9BU64 300 aa13.6□□□□□ -0.23
TPX2-202ENST00000340513 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
TPX2-202ENST00000340513 RNF168Q8IYW5 571 aaPredicted RBP13.6□□□□□ -0.23
TPX2-202ENST00000340513 WHAMMQ8TF30 809 aa13.6□□□□□ -0.23
TPX2-202ENST00000340513 HOOK1Q9UJC3 728 aaKnown RBP13.6□□□□□ -0.23
TPX2-202ENST00000340513 RPRD2Q5VT52 1461 aaKnown RBP13.6□□□□□ -0.23
TPX2-202ENST00000340513 A0A1B0GVG6 124 aa13.6□□□□□ -0.23
TPX2-202ENST00000340513 PARP9Q8IXQ6 854 aa13.6□□□□□ -0.23
TPX2-202ENST00000340513 NACA2Q9H009 215 aa13.6□□□□□ -0.23
TPX2-202ENST00000340513 MAPK8IP1Q9UQF2 711 aa13.6□□□□□ -0.23
TPX2-202ENST00000340513 RPGRIP1LQ68CZ1 1315 aa13.6□□□□□ -0.23
TPX2-202ENST00000340513 CCDC151A5D8V7 595 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 KIF3BO15066 747 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 FOXD4Q12950 439 aaPredicted RBP13.59□□□□□ -0.23
TPX2-202ENST00000340513 IQCB1Q15051 598 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 CTNNBL1Q8WYA6 563 aaPredicted RBP13.59□□□□□ -0.23
TPX2-202ENST00000340513 FAM167BQ9BTA0 163 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.59□□□□□ -0.237e-9■□□□□ 11
TPX2-202ENST00000340513 SLC7A5Q01650 507 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 PPARDQ03181 441 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 DNM1Q05193 864 aaKnown RBP13.59□□□□□ -0.23
TPX2-202ENST00000340513 OLFML1Q6UWY5 402 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 PLA2G4DQ86XP0 818 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 ABCB6Q9NP58 842 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 SPAG5Q96R06 1193 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 ATP6V1DQ9Y5K8 247 aa13.59□□□□□ -0.23
TPX2-202ENST00000340513 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
TPX2-202ENST00000340513 RHBDL3P58872 404 aa13.58□□□□□ -0.23
TPX2-202ENST00000340513 CCDC93Q567U6 631 aa13.58□□□□□ -0.23
TPX2-202ENST00000340513 INTS3Q68E01 1043 aaKnown RBP13.58□□□□□ -0.23
TPX2-202ENST00000340513 RCSD1Q6JBY9 416 aa13.58□□□□□ -0.23
TPX2-202ENST00000340513 MIPOL1Q8TD10 442 aa13.58□□□□□ -0.23
TPX2-202ENST00000340513 RIN2Q8WYP3 895 aaPredicted RBP13.58□□□□□ -0.23
TPX2-202ENST00000340513 GOLGA6L7A0A1B0GV03 622 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms