RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 API5Q9BZZ5 524 aaKnown RBP16.79■□□□□ 0.28
SIRPB3P-201ENST00000340424 COA1Q9GZY4 146 aa16.79■□□□□ 0.28
SIRPB3P-201ENST00000340424 PGAP2Q9UHJ9 254 aa16.79■□□□□ 0.28
SIRPB3P-201ENST00000340424 SCN9AQ15858 1988 aa16.78■□□□□ 0.28
SIRPB3P-201ENST00000340424 PCNTO95613 3336 aa16.78■□□□□ 0.28
SIRPB3P-201ENST00000340424 USP17L3A6NCW0 530 aa16.78■□□□□ 0.28
SIRPB3P-201ENST00000340424 USP17L4A6NCW7 530 aa16.78■□□□□ 0.28
SIRPB3P-201ENST00000340424 MMP14P50281 582 aa16.78■□□□□ 0.28
SIRPB3P-201ENST00000340424 RABL6Q3YEC7 729 aaPredicted RBP16.78■□□□□ 0.28
SIRPB3P-201ENST00000340424 EPHA10Q5JZY3 1008 aa16.78■□□□□ 0.28
SIRPB3P-201ENST00000340424 RSBN1LQ6PCB5 846 aaPredicted RBP16.78■□□□□ 0.28
SIRPB3P-201ENST00000340424 USP17L1Q7RTZ2 530 aa16.78■□□□□ 0.28
SIRPB3P-201ENST00000340424 SUCLG2Q96I99 432 aa16.78■□□□□ 0.28
SIRPB3P-201ENST00000340424 MYO3BQ8WXR4 1341 aa16.77■□□□□ 0.28
SIRPB3P-201ENST00000340424 RARSP54136 660 aaKnown RBP16.77■□□□□ 0.28
SIRPB3P-201ENST00000340424 LDHAL6AQ6ZMR3 332 aa16.77■□□□□ 0.28
SIRPB3P-201ENST00000340424 C15orf52Q6ZUT6 534 aaKnown RBP16.77■□□□□ 0.28
SIRPB3P-201ENST00000340424 ARHGAP45Q92619 1136 aa16.77■□□□□ 0.28
SIRPB3P-201ENST00000340424 KAZALD1Q96I82 304 aa16.77■□□□□ 0.28
SIRPB3P-201ENST00000340424 KCNQ5Q9NR82 932 aa16.77■□□□□ 0.28
SIRPB3P-201ENST00000340424 HDAC5Q9UQL6 1122 aa16.77■□□□□ 0.28
SIRPB3P-201ENST00000340424 HNRNPUQ00839 825 aaKnown RBP eCLIP16.76■□□□□ 0.27
SIRPB3P-201ENST00000340424 USP44Q9H0E7 712 aa16.76■□□□□ 0.27
SIRPB3P-201ENST00000340424 CNNM1Q9NRU3 951 aa16.76■□□□□ 0.27
SIRPB3P-201ENST00000340424 NOB1Q9ULX3 412 aaKnown RBP16.76■□□□□ 0.27
SIRPB3P-201ENST00000340424 A0A1B0GUL6 1792 aa16.76■□□□□ 0.27
SIRPB3P-201ENST00000340424 STRIP1Q5VSL9 837 aa16.75■□□□□ 0.27
SIRPB3P-201ENST00000340424 TRPM4Q8TD43 1214 aa16.75■□□□□ 0.27
SIRPB3P-201ENST00000340424 BICC1Q9H694 974 aaKnown RBP16.75■□□□□ 0.27
SIRPB3P-201ENST00000340424 CNTNAP1P78357 1384 aa16.75■□□□□ 0.27
SIRPB3P-201ENST00000340424 IPO8O15397 1037 aaKnown RBP16.74■□□□□ 0.27
SIRPB3P-201ENST00000340424 HIRAP54198 1017 aaPredicted RBP16.74■□□□□ 0.27
SIRPB3P-201ENST00000340424 ZNF280AP59817 542 aaPredicted RBP16.74■□□□□ 0.27
SIRPB3P-201ENST00000340424 CDC37L1Q7L3B6 337 aa16.74■□□□□ 0.27
SIRPB3P-201ENST00000340424 GMLQ99445 158 aa16.74■□□□□ 0.27
SIRPB3P-201ENST00000340424 TRPM7Q96QT4 1865 aa16.73■□□□□ 0.27
SIRPB3P-201ENST00000340424 MROH5Q6ZUA9 1318 aa16.73■□□□□ 0.27
SIRPB3P-201ENST00000340424 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
SIRPB3P-201ENST00000340424 USP17L8P0C7I0 530 aa16.73■□□□□ 0.27
SIRPB3P-201ENST00000340424 KIF4BQ2VIQ3 1234 aa16.73■□□□□ 0.27
SIRPB3P-201ENST00000340424 SAMD7Q7Z3H4 446 aa16.73■□□□□ 0.27
SIRPB3P-201ENST00000340424 ZNF804AQ7Z570 1209 aa16.73■□□□□ 0.27
SIRPB3P-201ENST00000340424 TXNRD3Q86VQ6 643 aa16.73■□□□□ 0.27
SIRPB3P-201ENST00000340424 ANKRD44Q8N8A2 993 aa16.73■□□□□ 0.27
SIRPB3P-201ENST00000340424 ZNF594Q96JF6 807 aaPredicted RBP16.73■□□□□ 0.27
SIRPB3P-201ENST00000340424 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
SIRPB3P-201ENST00000340424 SHTN1A0MZ66 631 aa16.72■□□□□ 0.27
SIRPB3P-201ENST00000340424 RASSF10A6NK89 507 aa16.72■□□□□ 0.27
SIRPB3P-201ENST00000340424 TAF5LO75529 589 aa16.72■□□□□ 0.27
SIRPB3P-201ENST00000340424 UBE4AQ14139 1066 aa16.72■□□□□ 0.27
SIRPB3P-201ENST00000340424 TBC1D10BQ4KMP7 808 aaPredicted RBP16.72■□□□□ 0.27
SIRPB3P-201ENST00000340424 DACT2Q5SW24 774 aa16.72■□□□□ 0.27
SIRPB3P-201ENST00000340424 IRS2Q9Y4H2 1338 aa16.71■□□□□ 0.27
SIRPB3P-201ENST00000340424 UBTFL1P0CB47 393 aaPredicted RBP16.71■□□□□ 0.27
SIRPB3P-201ENST00000340424 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.27
SIRPB3P-201ENST00000340424 OGFOD1Q8N543 542 aa16.71■□□□□ 0.27
SIRPB3P-201ENST00000340424 DCPSQ96C86 337 aaKnown RBP16.71■□□□□ 0.27
SIRPB3P-201ENST00000340424 CD209Q9NNX6 404 aa16.71■□□□□ 0.27
SIRPB3P-201ENST00000340424 ZNF646O15015 1829 aaPredicted RBP16.7■□□□□ 0.26
SIRPB3P-201ENST00000340424 IL1R1P14778 569 aa16.7■□□□□ 0.26
SIRPB3P-201ENST00000340424 KLRK1P26718 216 aa16.7■□□□□ 0.26
SIRPB3P-201ENST00000340424 INTS3Q68E01 1043 aaKnown RBP16.7■□□□□ 0.26
SIRPB3P-201ENST00000340424 HELBQ8NG08 1087 aaPredicted RBP16.7■□□□□ 0.26
SIRPB3P-201ENST00000340424 GLIS2Q9BZE0 524 aaPredicted RBP16.7■□□□□ 0.26
SIRPB3P-201ENST00000340424 MYOZ2Q9NPC6 264 aa16.7■□□□□ 0.26
SIRPB3P-201ENST00000340424 MKRN1Q9UHC7 482 aaKnown RBP16.7■□□□□ 0.26
SIRPB3P-201ENST00000340424 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
SIRPB3P-201ENST00000340424 RIPOR2Q9Y4F9 1068 aa16.7■□□□□ 0.26
SIRPB3P-201ENST00000340424 TRAF5O00463 557 aa16.69■□□□□ 0.26
SIRPB3P-201ENST00000340424 FKBP1AP62942 108 aaKnown RBP16.69■□□□□ 0.26
SIRPB3P-201ENST00000340424 DEFB115Q30KQ5 88 aa16.69■□□□□ 0.26
SIRPB3P-201ENST00000340424 RBM26Q5T8P6 1007 aaKnown RBP16.69■□□□□ 0.26
SIRPB3P-201ENST00000340424 KRT26Q7Z3Y9 468 aa16.69■□□□□ 0.26
SIRPB3P-201ENST00000340424 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
SIRPB3P-201ENST00000340424 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
SIRPB3P-201ENST00000340424 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
SIRPB3P-201ENST00000340424 PLIN1O60240 522 aa16.68■□□□□ 0.26
SIRPB3P-201ENST00000340424 EGFRP00533 1210 aa16.68■□□□□ 0.26
SIRPB3P-201ENST00000340424 CST9Q5W186 159 aa16.68■□□□□ 0.26
SIRPB3P-201ENST00000340424 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
SIRPB3P-201ENST00000340424 SULF1Q8IWU6 871 aa16.68■□□□□ 0.26
SIRPB3P-201ENST00000340424 HHIPL1Q96JK4 782 aa16.68■□□□□ 0.26
SIRPB3P-201ENST00000340424 HDAC9Q9UKV0 1011 aa16.68■□□□□ 0.26
SIRPB3P-201ENST00000340424 TLL2Q9Y6L7 1015 aa16.68■□□□□ 0.26
SIRPB3P-201ENST00000340424 CELF2O95319 508 aaKnown RBP16.67■□□□□ 0.26
SIRPB3P-201ENST00000340424 GNAI3P08754 354 aa16.67■□□□□ 0.26
SIRPB3P-201ENST00000340424 GTF2IP78347 998 aa16.67■□□□□ 0.26
SIRPB3P-201ENST00000340424 METTL24Q5JXM2 366 aa16.67■□□□□ 0.26
SIRPB3P-201ENST00000340424 PUS3Q9BZE2 481 aaKnown RBP16.67■□□□□ 0.26
SIRPB3P-201ENST00000340424 GGA3Q9NZ52 723 aa16.67■□□□□ 0.26
SIRPB3P-201ENST00000340424 SNAP23O00161 211 aa16.66■□□□□ 0.26
SIRPB3P-201ENST00000340424 PDE8BO95263 885 aa16.66■□□□□ 0.26
SIRPB3P-201ENST00000340424 TRIM27P14373 513 aa16.66■□□□□ 0.26
SIRPB3P-201ENST00000340424 ECE1P42892 770 aa16.66■□□□□ 0.26
SIRPB3P-201ENST00000340424 SCARF1Q14162 830 aa16.66■□□□□ 0.26
SIRPB3P-201ENST00000340424 USP48Q86UV5 1035 aa16.66■□□□□ 0.26
SIRPB3P-201ENST00000340424 SSUH2Q9Y2M2 353 aa16.66■□□□□ 0.26
SIRPB3P-201ENST00000340424 SASH1O94885 1247 aa16.65■□□□□ 0.26
SIRPB3P-201ENST00000340424 HIBADHP31937 336 aaKnown RBP16.65■□□□□ 0.26
SIRPB3P-201ENST00000340424 VEGFBP49765 207 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms