RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 APPBP2Q92624 585 aa12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 KIF3AQ9Y496 699 aa12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 SPATA31A1Q5TZJ5 1347 aa12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 COL9A3Q14050 684 aaPredicted RBP12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 TTF1Q15361 905 aaPredicted RBP12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 Q6ZUG5 572 aa12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 NECAB1Q8N987 351 aa12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ANKRD18BA2A2Z9 1011 aa12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 EIF5P55010 431 aaKnown RBP12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 TTC39AQ5SRH9 613 aa12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 CCDC129Q6ZRS4 1044 aa12.69□□□□□ -0.38
TRAF3IP2-201ENST00000340026 SLIT2O94813 1529 aa12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 E7EWF7 191 aa12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 HSP90B1P14625 803 aaKnown RBP12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 FAM89AQ96GI7 184 aa12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ARXQ96QS3 562 aa12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 NOL7Q9UMY1 257 aaKnown RBP12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 MROH5Q6ZUA9 1318 aa12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 HLFQ16534 295 aa12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 RBM43Q6ZSC3 357 aaKnown RBP12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 BARGINQ6ZT62 677 aa12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 CDC37L1Q7L3B6 337 aa12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 LARP6Q9BRS8 491 aaKnown RBP12.68□□□□□ -0.38
TRAF3IP2-201ENST00000340026 FGFR2P21802 821 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ITGA6P23229 1130 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 UBE3CQ15386 1083 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 OSBP2Q969R2 916 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 GDPD2Q9HCC8 539 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ZBTB1Q9Y2K1 713 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 FOXP2O15409 715 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 UQCRFS1P1P0C7P4 283 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 RESTQ13127 1097 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 PARP10Q53GL7 1025 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 NDUFB9Q9Y6M9 179 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 TIAM2Q8IVF5 1701 aa12.67□□□□□ -0.38
TRAF3IP2-201ENST00000340026 M0R2C6 588 aa12.66□□□□□ -0.38
TRAF3IP2-201ENST00000340026 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ZBTB22O15209 634 aa12.66□□□□□ -0.38
TRAF3IP2-201ENST00000340026 PDE8BO95263 885 aa12.66□□□□□ -0.38
TRAF3IP2-201ENST00000340026 SCRN1Q12765 414 aa12.66□□□□□ -0.38
TRAF3IP2-201ENST00000340026 NSUN7Q8NE18 718 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP2-201ENST00000340026 VPS37CA5D8V6 355 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP2-201ENST00000340026 TAF7LQ5H9L4 462 aa12.66□□□□□ -0.38
TRAF3IP2-201ENST00000340026 TTC6Q86TZ1 520 aa12.66□□□□□ -0.38
TRAF3IP2-201ENST00000340026 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ZNF500O60304 480 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ADRA2BP18089 450 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 LDHAL6AQ6ZMR3 332 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 UBN2Q6ZU65 1347 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 DZIP3Q86Y13 1208 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 GREM2Q9H772 168 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 CARMIL3Q8ND23 1372 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 FIBPO43427 364 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ADORA1P30542 326 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 ADD2P35612 726 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 IMMTQ16891 758 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 BRF1Q92994 677 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 CFAP45Q9UL16 551 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 A0A1B0GUL6 1792 aa12.65□□□□□ -0.38
TRAF3IP2-201ENST00000340026 SPATA31A5Q5VU36 1347 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 SPATA31A7Q8IWB4 1347 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CHGBP05060 677 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 ALX1Q15699 326 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 METTL24Q5JXM2 366 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 GORABQ5T7V8 394 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 INTS5Q6P9B9 1019 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 LPIN2Q92539 896 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 DDX19AQ9NUU7 478 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CCDC39Q9UFE4 941 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 TAOK2Q9UL54 1235 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 PUM3Q15397 648 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CCDC87Q9NVE4 849 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 C4AP0C0L4 1744 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CTDNEP1O95476 244 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 MCAMP43121 646 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 ZAP70P43403 619 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 LEO1Q8WVC0 666 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP2-201ENST00000340026 SCN7AQ01118 1682 aa12.63□□□□□ -0.39
TRAF3IP2-201ENST00000340026 PDIA3P30101 505 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP2-201ENST00000340026 SCARF1Q14162 830 aa12.63□□□□□ -0.39
TRAF3IP2-201ENST00000340026 MYH14Q7Z406 1995 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP2-201ENST00000340026 CAVIN2O95810 425 aa12.63□□□□□ -0.39
TRAF3IP2-201ENST00000340026 TERF1P54274 439 aa12.63□□□□□ -0.39
TRAF3IP2-201ENST00000340026 SMARCC1Q92922 1105 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP2-201ENST00000340026 BCL9LQ86UU0 1499 aa12.63□□□□□ -0.39
TRAF3IP2-201ENST00000340026 NID2Q14112 1375 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 DHX16O60231 1041 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 FGAP02671 866 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 DDB1Q16531 1140 aa12.62□□□□□ -0.39
TRAF3IP2-201ENST00000340026 MTA3Q9BTC8 594 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms