RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 OSBP2Q969R2 916 aa15.45■□□□□ 0.06
CDK5RAP1-201ENST00000339269 XAGE2Q96GT9 111 aa15.45■□□□□ 0.06
CDK5RAP1-201ENST00000339269 LAMA4Q16363 1823 aa15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 RNF113AO15541 343 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 VGLL2Q8N8G2 317 aa15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 GTF3C6Q969F1 213 aa15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 GREM2Q9H772 168 aa15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 UBN2Q6ZU65 1347 aa15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 JAK2O60674 1132 aa15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 TRIM37O94972 964 aa15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 HSPD1P10809 573 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 EXOSC10Q01780 885 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 Q6ZUG5 572 aa15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 AGXT2Q9BYV1 514 aa15.44■□□□□ 0.06
CDK5RAP1-201ENST00000339269 FIBPO43427 364 aa15.43■□□□□ 0.06
CDK5RAP1-201ENST00000339269 CLCN1P35523 988 aa15.43■□□□□ 0.06
CDK5RAP1-201ENST00000339269 CTSWP56202 376 aa15.43■□□□□ 0.06
CDK5RAP1-201ENST00000339269 UBE2HP62256 183 aa15.43■□□□□ 0.06
CDK5RAP1-201ENST00000339269 PI16Q6UXB8 463 aa15.43■□□□□ 0.06
CDK5RAP1-201ENST00000339269 LRRC2Q9BYS8 371 aa15.43■□□□□ 0.06
CDK5RAP1-201ENST00000339269 VPS37CA5D8V6 355 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 ESPNB1AK53 854 aa15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 STK3Q13188 491 aa15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 SF3B2Q13435 895 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 LARP1BQ659C4 914 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 NUP98P52948 1817 aa15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 ITGA6P23229 1130 aa15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 IFIT5Q13325 482 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 TTLL5Q6EMB2 1281 aa15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 FAM173BQ6P4H8 233 aa15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 ZNF34Q8IZ26 560 aa15.42■□□□□ 0.06
CDK5RAP1-201ENST00000339269 NHSQ6T4R5 1651 aa15.41■□□□□ 0.06
CDK5RAP1-201ENST00000339269 AKAP11Q9UKA4 1901 aa15.41■□□□□ 0.06
CDK5RAP1-201ENST00000339269 RREB1Q92766 1687 aa15.41■□□□□ 0.06
CDK5RAP1-201ENST00000339269 ZAP70P43403 619 aa15.41■□□□□ 0.06
CDK5RAP1-201ENST00000339269 INTS5Q6P9B9 1019 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP1-201ENST00000339269 CCDC125Q86Z20 511 aa15.41■□□□□ 0.06
CDK5RAP1-201ENST00000339269 ACSBG1Q96GR2 724 aa15.41■□□□□ 0.06
CDK5RAP1-201ENST00000339269 AKAP2Q9Y2D5 859 aa15.41■□□□□ 0.06
CDK5RAP1-201ENST00000339269 ABCC12Q96J65 1359 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 ERVV-1B6SEH8 477 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 IRS4O14654 1257 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 CTDNEP1O95476 244 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 IL6STP40189 918 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 SCRN1Q12765 414 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 TTC6Q86TZ1 520 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 FERMT3Q86UX7 667 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 SMARCC2Q8TAQ2 1214 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 ATP6V1DQ9Y5K8 247 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 BTAF1O14981 1849 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 E7EWF7 191 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 PFKFB2O60825 505 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 MCAMP43121 646 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 EIF5P55010 431 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 HSP90AB3PQ58FF7 597 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 CCDC183Q5T5S1 534 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 DHX32Q7L7V1 743 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 BRF1Q92994 677 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 FUCA2Q9BTY2 467 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 TSPY26PQ9H489 355 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 TBC1D2BQ9UPU7 963 aa15.4■□□□□ 0.06
CDK5RAP1-201ENST00000339269 MYH3P11055 1940 aa15.39■□□□□ 0.05
CDK5RAP1-201ENST00000339269 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
CDK5RAP1-201ENST00000339269 ATP2B3Q16720 1220 aa15.39■□□□□ 0.05
CDK5RAP1-201ENST00000339269 DZIP3Q86Y13 1208 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP1-201ENST00000339269 SYAP1Q96A49 352 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP1-201ENST00000339269 PKNOX2Q96KN3 472 aa15.39■□□□□ 0.05
CDK5RAP1-201ENST00000339269 CICQ96RK0 1608 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP1-201ENST00000339269 RESTQ13127 1097 aa15.38■□□□□ 0.05
CDK5RAP1-201ENST00000339269 CCDC158Q5M9N0 1113 aa15.38■□□□□ 0.05
CDK5RAP1-201ENST00000339269 RNF214Q8ND24 703 aa15.38■□□□□ 0.05
CDK5RAP1-201ENST00000339269 SYTL4Q96C24 671 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP1-201ENST00000339269 PUS7LQ9H0K6 701 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP1-201ENST00000339269 SALL1Q9NSC2 1324 aa15.38■□□□□ 0.05
CDK5RAP1-201ENST00000339269 KCNQ2O43526 872 aa15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 PDCP20941 246 aa15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 TAF7LQ5H9L4 462 aa15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 METTL24Q5JXM2 366 aa15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 PTF1AQ7RTS3 328 aa15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 NSUN7Q8NE18 718 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 ZNF512BQ96KM6 892 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 ELP1O95163 1332 aa15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 HMGB1P09429 215 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 APOBRQ0VD83 1088 aa15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 ITPK1Q13572 414 aa15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 LDHAL6AQ6ZMR3 332 aa15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 DEFB132Q7Z7B7 95 aa15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP1-201ENST00000339269 DDX60Q8IY21 1712 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP1-201ENST00000339269 ANKRD18BA2A2Z9 1011 aa15.36■□□□□ 0.05
CDK5RAP1-201ENST00000339269 PDE8AO60658 829 aa15.36■□□□□ 0.05
CDK5RAP1-201ENST00000339269 APBA3O96018 575 aa15.36■□□□□ 0.05
CDK5RAP1-201ENST00000339269 PDIA4P13667 645 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP1-201ENST00000339269 FGFR2P21802 821 aa15.36■□□□□ 0.05
CDK5RAP1-201ENST00000339269 BAG6P46379 1132 aa15.36■□□□□ 0.05
CDK5RAP1-201ENST00000339269 FBXL16Q8N461 479 aa15.36■□□□□ 0.05
CDK5RAP1-201ENST00000339269 APPBP2Q92624 585 aa15.36■□□□□ 0.05
CDK5RAP1-201ENST00000339269 BCL11BQ9C0K0 894 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms