RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 TRIM37O94972 964 aa20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 SSFA2P28290 1259 aa20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 GTF2E1P29083 439 aaPredicted RBP20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 PKP1Q13835 747 aa20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 SF3B3Q15393 1217 aaKnown RBP20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 TM6SF1Q9BZW5 370 aa20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 MRE11P49959 708 aa20.52■□□□□ 0.88
ATAD3A-201ENST00000339113 SLC10A5Q5PT55 438 aa20.52■□□□□ 0.88
ATAD3A-201ENST00000339113 RUFY3Q7L099 469 aa20.52■□□□□ 0.88
ATAD3A-201ENST00000339113 TRAPPC3LQ5T215 181 aa20.52■□□□□ 0.87
ATAD3A-201ENST00000339113 OSBP2Q969R2 916 aa20.52■□□□□ 0.87
ATAD3A-201ENST00000339113 ZNF512BQ96KM6 892 aaPredicted RBP20.52■□□□□ 0.87
ATAD3A-201ENST00000339113 LAMB2P55268 1798 aa20.51■□□□□ 0.87
ATAD3A-201ENST00000339113 C4BP0C0L5 1744 aa20.51■□□□□ 0.87
ATAD3A-201ENST00000339113 MAST3O60307 1309 aa20.51■□□□□ 0.87
ATAD3A-201ENST00000339113 M0R2C6 588 aa20.51■□□□□ 0.87
ATAD3A-201ENST00000339113 NBPF5PQ86XG9 351 aaPredicted RBP20.51■□□□□ 0.87
ATAD3A-201ENST00000339113 CWC22Q9HCG8 908 aaKnown RBP20.51■□□□□ 0.87
ATAD3A-201ENST00000339113 CYP2E1P05181 493 aaPredicted RBP20.5■□□□□ 0.87
ATAD3A-201ENST00000339113 RFC4P35249 363 aa20.5■□□□□ 0.87
ATAD3A-201ENST00000339113 CHRNDQ07001 517 aa20.5■□□□□ 0.87
ATAD3A-201ENST00000339113 TICAM2Q86XR7 235 aa20.5■□□□□ 0.87
ATAD3A-201ENST00000339113 WTIPA6NIX2 430 aaPredicted RBP20.5■□□□□ 0.87
ATAD3A-201ENST00000339113 PDRG1Q9NUG6 133 aa20.5■□□□□ 0.87
ATAD3A-201ENST00000339113 CYP46A1Q9Y6A2 500 aa20.5■□□□□ 0.87
ATAD3A-201ENST00000339113 RPAP1Q9BWH6 1393 aaPredicted RBP20.5■□□□□ 0.87
ATAD3A-201ENST00000339113 SPEF2Q9C093 1822 aa20.5■□□□□ 0.87
ATAD3A-201ENST00000339113 RNF20Q5VTR2 975 aa20.49■□□□□ 0.87
ATAD3A-201ENST00000339113 BRWD3Q6RI45 1802 aa20.49■□□□□ 0.87
ATAD3A-201ENST00000339113 SLC5A1P13866 664 aa20.49■□□□□ 0.87
ATAD3A-201ENST00000339113 ARID4AP29374 1257 aaPredicted RBP20.49■□□□□ 0.87
ATAD3A-201ENST00000339113 CLCN1P35523 988 aa20.49■□□□□ 0.87
ATAD3A-201ENST00000339113 TSGA10IPQ3SY00 556 aa20.49■□□□□ 0.87
ATAD3A-201ENST00000339113 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
ATAD3A-201ENST00000339113 NYXQ9GZU5 481 aa20.49■□□□□ 0.87
ATAD3A-201ENST00000339113 CELF1Q92879 486 aaKnown RBP20.48■□□□□ 0.87
ATAD3A-201ENST00000339113 PIH1D3Q9NQM4 214 aaKnown RBP20.48■□□□□ 0.87
ATAD3A-201ENST00000339113 U3KPZ7 1027 aaPredicted RBP20.48■□□□□ 0.87
ATAD3A-201ENST00000339113 AKAP11Q9UKA4 1901 aa20.48■□□□□ 0.87
ATAD3A-201ENST00000339113 CYP21A2P08686 494 aa20.48■□□□□ 0.87
ATAD3A-201ENST00000339113 HMG20BQ9P0W2 317 aa20.48■□□□□ 0.87
ATAD3A-201ENST00000339113 LIMCH1Q9UPQ0 1083 aa20.48■□□□□ 0.87
ATAD3A-201ENST00000339113 TAF1P21675 1872 aa20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 A0A0G2JLW4 131 aa20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 LARGE1O95461 756 aa20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 HSPD1P10809 573 aaKnown RBP20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 TPTE2Q6XPS3 522 aa20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 ANKRD18AQ8IVF6 992 aa20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 TCEANC2Q96MN5 208 aa20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 ZDHHC9Q9Y397 364 aa20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 BCAMP50895 628 aa20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 WASHC4Q2M389 1173 aa20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 INTS4Q96HW7 963 aaKnown RBP20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 PUS7LQ9H0K6 701 aaKnown RBP20.47■□□□□ 0.87
ATAD3A-201ENST00000339113 UQCRFS1P1P0C7P4 283 aa20.46■□□□□ 0.87
ATAD3A-201ENST00000339113 DSCC1Q9BVC3 393 aa20.46■□□□□ 0.87
ATAD3A-201ENST00000339113 ZFYP08048 801 aaPredicted RBP20.45■□□□□ 0.87
ATAD3A-201ENST00000339113 PSMA5P28066 241 aa20.45■□□□□ 0.87
ATAD3A-201ENST00000339113 NFIXQ14938 502 aa20.45■□□□□ 0.87
ATAD3A-201ENST00000339113 PROM2Q8N271 834 aa20.45■□□□□ 0.87
ATAD3A-201ENST00000339113 NLRP3Q96P20 1036 aa20.45■□□□□ 0.87
ATAD3A-201ENST00000339113 BSDC1Q9NW68 430 aaPredicted RBP20.45■□□□□ 0.87
ATAD3A-201ENST00000339113 C4AP0C0L4 1744 aa20.45■□□□□ 0.86
ATAD3A-201ENST00000339113 FOXP2O15409 715 aa20.45■□□□□ 0.86
ATAD3A-201ENST00000339113 PTMSP20962 102 aa20.45■□□□□ 0.86
ATAD3A-201ENST00000339113 NUCB2P80303 420 aa20.45■□□□□ 0.86
ATAD3A-201ENST00000339113 RASGRF1Q13972 1273 aa20.45■□□□□ 0.86
ATAD3A-201ENST00000339113 COL24A1Q17RW2 1714 aa20.44■□□□□ 0.86
ATAD3A-201ENST00000339113 BLOC1S2Q6QNY1 142 aa20.44■□□□□ 0.86
ATAD3A-201ENST00000339113 MINPP1Q9UNW1 487 aa20.44■□□□□ 0.86
ATAD3A-201ENST00000339113 RPS6KB1P23443 525 aa20.44■□□□□ 0.86
ATAD3A-201ENST00000339113 RBM6P78332 1123 aaKnown RBP20.44■□□□□ 0.86
ATAD3A-201ENST00000339113 LRRFIP1Q32MZ4 808 aaKnown RBP20.44■□□□□ 0.86
ATAD3A-201ENST00000339113 STOX1Q6ZVD7 989 aa20.44■□□□□ 0.86
ATAD3A-201ENST00000339113 SPATA5Q8NB90 893 aa20.44■□□□□ 0.86
ATAD3A-201ENST00000339113 APPBP2Q92624 585 aa20.44■□□□□ 0.86
ATAD3A-201ENST00000339113 DTNBO60941 627 aa20.43■□□□□ 0.86
ATAD3A-201ENST00000339113 IDH1O75874 414 aaKnown RBP20.43■□□□□ 0.86
ATAD3A-201ENST00000339113 SLC27A3Q5K4L6 730 aa20.43■□□□□ 0.86
ATAD3A-201ENST00000339113 SLC9C2Q5TAH2 1124 aa20.43■□□□□ 0.86
ATAD3A-201ENST00000339113 GZF1Q9H116 711 aaPredicted RBP20.43■□□□□ 0.86
ATAD3A-201ENST00000339113 TM4SF1P30408 202 aa20.43■□□□□ 0.86
ATAD3A-201ENST00000339113 ADD2P35612 726 aa20.43■□□□□ 0.86
ATAD3A-201ENST00000339113 TTF1Q15361 905 aaPredicted RBP20.43■□□□□ 0.86
ATAD3A-201ENST00000339113 TTLL5Q6EMB2 1281 aa20.43■□□□□ 0.86
ATAD3A-201ENST00000339113 PANK2Q9BZ23 570 aa20.43■□□□□ 0.86
ATAD3A-201ENST00000339113 ARAP2Q8WZ64 1704 aa20.42■□□□□ 0.86
ATAD3A-201ENST00000339113 SKOR2Q2VWA4 1001 aaPredicted RBP20.42■□□□□ 0.86
ATAD3A-201ENST00000339113 GRPEL1Q9HAV7 217 aa20.42■□□□□ 0.86
ATAD3A-201ENST00000339113 WWC3Q9ULE0 1092 aa20.42■□□□□ 0.86
ATAD3A-201ENST00000339113 TPCN1Q9ULQ1 816 aa20.42■□□□□ 0.86
ATAD3A-201ENST00000339113 CASZ1Q86V15 1759 aa20.42■□□□□ 0.86
ATAD3A-201ENST00000339113 ADRA2BP18089 450 aa20.42■□□□□ 0.86
ATAD3A-201ENST00000339113 RPS8P62241 208 aaKnown RBP20.42■□□□□ 0.86
ATAD3A-201ENST00000339113 ME3Q16798 604 aa20.42■□□□□ 0.86
ATAD3A-201ENST00000339113 NEK1Q96PY6 1258 aa20.42■□□□□ 0.86
ATAD3A-201ENST00000339113 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.42■□□□□ 0.861e-7■■■□□ 18.6
ATAD3A-201ENST00000339113 ST3GAL1Q11201 340 aa20.41■□□□□ 0.86
ATAD3A-201ENST00000339113 TOB2Q14106 344 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms