RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ABCC12Q96J65 1359 aa19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 GOLGA6L3A6NEY3 463 aa19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 GJB2P29033 226 aa19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 ZSCAN31Q96LW9 406 aaPredicted RBP19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 AK7Q96M32 723 aa19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 NEK1Q96PY6 1258 aa19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 LAMB2P55268 1798 aa19.38■□□□□ 0.69
SCNN1A-202ENST00000338748 WDR33Q9C0J8 1336 aaKnown RBP19.38■□□□□ 0.69
SCNN1A-202ENST00000338748 FGFR2P21802 821 aa19.38■□□□□ 0.69
SCNN1A-202ENST00000338748 TTLL5Q6EMB2 1281 aa19.38■□□□□ 0.69
SCNN1A-202ENST00000338748 LRRC2Q9BYS8 371 aa19.38■□□□□ 0.69
SCNN1A-202ENST00000338748 NSFL1CQ9UNZ2 370 aaKnown RBP19.38■□□□□ 0.69
SCNN1A-202ENST00000338748 MYH7P12883 1935 aa19.38■□□□□ 0.69
SCNN1A-202ENST00000338748 TCHHQ07283 1943 aa19.38■□□□□ 0.69
SCNN1A-202ENST00000338748 KRT32Q14532 448 aa19.37■□□□□ 0.69
SCNN1A-202ENST00000338748 CCDC102BQ68D86 513 aa19.37■□□□□ 0.69
SCNN1A-202ENST00000338748 C3orf67Q6ZVT6 689 aa19.37■□□□□ 0.69
SCNN1A-202ENST00000338748 PUS7LQ9H0K6 701 aaKnown RBP19.37■□□□□ 0.69
SCNN1A-202ENST00000338748 STX6O43752 255 aa19.37■□□□□ 0.69
SCNN1A-202ENST00000338748 AMIGO3Q86WK7 504 aa19.37■□□□□ 0.69
SCNN1A-202ENST00000338748 TICAM2Q86XR7 235 aa19.37■□□□□ 0.69
SCNN1A-202ENST00000338748 GDPD2Q9HCC8 539 aa19.37■□□□□ 0.69
SCNN1A-202ENST00000338748 XRCC6P12956 609 aaKnown RBP eCLIP19.36■□□□□ 0.69
SCNN1A-202ENST00000338748 PUM3Q15397 648 aaKnown RBP19.36■□□□□ 0.69
SCNN1A-202ENST00000338748 WASHC4Q2M389 1173 aa19.36■□□□□ 0.69
SCNN1A-202ENST00000338748 ALDH8A1Q9H2A2 487 aaPredicted RBP19.36■□□□□ 0.69
SCNN1A-202ENST00000338748 ARAP2Q8WZ64 1704 aa19.36■□□□□ 0.69
SCNN1A-202ENST00000338748 SPATA31A6Q5VVP1 1343 aa19.36■□□□□ 0.69
SCNN1A-202ENST00000338748 STK3Q13188 491 aa19.36■□□□□ 0.69
SCNN1A-202ENST00000338748 PIH1D3Q9NQM4 214 aaKnown RBP19.36■□□□□ 0.69
SCNN1A-202ENST00000338748 MROH5Q6ZUA9 1318 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 ZSCAN22P10073 491 aaPredicted RBP19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 CAVIN1Q6NZI2 390 aaKnown RBP19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 MPHOSPH8Q99549 860 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 PANK2Q9BZ23 570 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 CNTNAP4Q9C0A0 1308 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 TAF1P21675 1872 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 NCLP19338 710 aaKnown RBP19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 ERFEQ4G0M1 354 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 CCDC152Q4G0S7 254 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 Q6ZUG5 572 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 LPIN2Q92539 896 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 ZNF512BQ96KM6 892 aaPredicted RBP19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 ZNF652Q9Y2D9 606 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 NHSQ6T4R5 1651 aa19.35■□□□□ 0.69
SCNN1A-202ENST00000338748 SCN7AQ01118 1682 aa19.34■□□□□ 0.69
SCNN1A-202ENST00000338748 ARID4AP29374 1257 aaPredicted RBP19.34■□□□□ 0.69
SCNN1A-202ENST00000338748 ANKRD1Q15327 319 aa19.34■□□□□ 0.69
SCNN1A-202ENST00000338748 BICDL1Q6ZP65 573 aa19.34■□□□□ 0.69
SCNN1A-202ENST00000338748 APPBP2Q92624 585 aa19.34■□□□□ 0.69
SCNN1A-202ENST00000338748 RBM27Q9P2N5 1060 aaKnown RBP19.34■□□□□ 0.69
SCNN1A-202ENST00000338748 ZFYP08048 801 aaPredicted RBP19.33■□□□□ 0.69
SCNN1A-202ENST00000338748 SRP68Q9UHB9 627 aaKnown RBP19.33■□□□□ 0.69
SCNN1A-202ENST00000338748 MTMR6Q9Y217 621 aa19.33■□□□□ 0.69
SCNN1A-202ENST00000338748 RTL9Q8NET4 1388 aa19.33■□□□□ 0.69
SCNN1A-202ENST00000338748 CASZ1Q86V15 1759 aa19.33■□□□□ 0.68
SCNN1A-202ENST00000338748 E7EWF7 191 aa19.33■□□□□ 0.68
SCNN1A-202ENST00000338748 L1TD1Q5T7N2 865 aaKnown RBP19.33■□□□□ 0.68
SCNN1A-202ENST00000338748 TBC1D9BQ66K14 1250 aa19.33■□□□□ 0.68
SCNN1A-202ENST00000338748 CLEC4GQ6UXB4 293 aa19.33■□□□□ 0.68
SCNN1A-202ENST00000338748 GPAA1O43292 621 aa19.32■□□□□ 0.68
SCNN1A-202ENST00000338748 F13A1P00488 732 aa19.32■□□□□ 0.68
SCNN1A-202ENST00000338748 ADD2P35612 726 aa19.32■□□□□ 0.68
SCNN1A-202ENST00000338748 HAND2P61296 217 aa19.32■□□□□ 0.68
SCNN1A-202ENST00000338748 BRF1Q92994 677 aa19.32■□□□□ 0.68
SCNN1A-202ENST00000338748 WTIPA6NIX2 430 aaPredicted RBP19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 IDH1O75874 414 aaKnown RBP19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 RASGRF1Q13972 1273 aa19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 SLC9C2Q5TAH2 1124 aa19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 CHST3Q7LGC8 479 aa19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 WWC3Q9ULE0 1092 aa19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 GADD45BO75293 160 aaPredicted RBP19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 FGAP02671 866 aa19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 HSPA1LP34931 641 aa19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 LRRFIP1Q32MZ4 808 aaKnown RBP19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 GJD4Q96KN9 370 aaPredicted RBP19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 CNPY2Q9Y2B0 182 aa19.31■□□□□ 0.68
SCNN1A-202ENST00000338748 GNPATO15228 680 aa19.3■□□□□ 0.68
SCNN1A-202ENST00000338748 SLC5A1P13866 664 aa19.3■□□□□ 0.68
SCNN1A-202ENST00000338748 CHRNDQ07001 517 aa19.3■□□□□ 0.68
SCNN1A-202ENST00000338748 ZSCAN23Q3MJ62 389 aa19.3■□□□□ 0.68
SCNN1A-202ENST00000338748 DHX32Q7L7V1 743 aaKnown RBP19.3■□□□□ 0.68
SCNN1A-202ENST00000338748 GTF3C6Q969F1 213 aa19.3■□□□□ 0.68
SCNN1A-202ENST00000338748 GRPEL1Q9HAV7 217 aa19.3■□□□□ 0.68
SCNN1A-202ENST00000338748 TMEM63CQ9P1W3 806 aa19.3■□□□□ 0.68
SCNN1A-202ENST00000338748 VPS37CA5D8V6 355 aaPredicted RBP19.29■□□□□ 0.68
SCNN1A-202ENST00000338748 JAK2O60674 1132 aa19.29■□□□□ 0.68
SCNN1A-202ENST00000338748 IGHMBP2P38935 993 aaKnown RBP19.29■□□□□ 0.68
SCNN1A-202ENST00000338748 EXOSC10Q01780 885 aaKnown RBP19.29■□□□□ 0.68
SCNN1A-202ENST00000338748 CCNL1Q9UK58 526 aaPredicted RBP19.29■□□□□ 0.68
SCNN1A-202ENST00000338748 AFF2P51816 1311 aa19.29■□□□□ 0.68
SCNN1A-202ENST00000338748 ATRNO75882 1429 aa19.29■□□□□ 0.68
SCNN1A-202ENST00000338748 BCAMP50895 628 aa19.29■□□□□ 0.68
SCNN1A-202ENST00000338748 MEX3CQ5U5Q3 659 aaKnown RBP19.29■□□□□ 0.68
SCNN1A-202ENST00000338748 USP48Q86UV5 1035 aa19.29■□□□□ 0.68
SCNN1A-202ENST00000338748 ZNF532Q9HCE3 1301 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 TCRBV5S4A2TA0A5A2 114 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 PDE6AP16499 860 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 CDC37L1Q7L3B6 337 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms