RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MPHOSPH8Q99549 860 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 EFCC1Q9HA90 598 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 FAN1Q9Y2M0 1017 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 CDKL5O76039 1030 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 ATP6V1AP38606 617 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 EPS15P42566 896 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 AEBP2Q6ZN18 517 aaPredicted RBP15.14■□□□□ 0.01
COL2A1-201ENST00000337299 HMG20BQ9P0W2 317 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 ABCC4O15439 1325 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 SHANK2Q9UPX8 1470 aa15.13■□□□□ 0.01
COL2A1-201ENST00000337299 EFCAB8A8MWE9 144 aa15.13■□□□□ 0.01
COL2A1-201ENST00000337299 HMGB1P09429 215 aaKnown RBP15.13■□□□□ 0.01
COL2A1-201ENST00000337299 TXLNAP40222 546 aa15.13■□□□□ 0.01
COL2A1-201ENST00000337299 SPECC1Q5M775 1068 aa15.13■□□□□ 0.01
COL2A1-201ENST00000337299 HSF2BPO75031 334 aa15.13■□□□□ 0.01
COL2A1-201ENST00000337299 EZRP15311 586 aaKnown RBP15.13■□□□□ 0.01
COL2A1-201ENST00000337299 PIP4K2BP78356 416 aa15.13■□□□□ 0.01
COL2A1-201ENST00000337299 FTOQ9C0B1 505 aaKnown RBP eCLIP15.13■□□□□ 0.01
COL2A1-201ENST00000337299 LONRF2Q1L5Z9 754 aa15.13■□□□□ 0.01
COL2A1-201ENST00000337299 RGS12O14924 1447 aa15.13■□□□□ 0.01
COL2A1-201ENST00000337299 ELP1O95163 1332 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 HYPKQ9NX55 129 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 IMPACTQ9P2X3 320 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 ADGRL2O95490 1459 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 SLC27A2O14975 620 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 CHRNA2Q15822 529 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 TTC19Q6DKK2 380 aaPredicted RBP15.12■□□□□ 0.01
COL2A1-201ENST00000337299 CCDC129Q6ZRS4 1044 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 STIM1Q13586 685 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 CCDC158Q5M9N0 1113 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 UBAC1Q9BSL1 405 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 GOLGA6CA6NDK9 693 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 ARHGAP6O43182 974 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 GOLGA6DP0CG33 693 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 KCNA6P17658 529 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
COL2A1-201ENST00000337299 USP28Q96RU2 1077 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 GOLGA6AQ9NYA3 693 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 ADAM21Q9UKJ8 722 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 CAPN7Q9Y6W3 813 aa15.12■□□□□ 0.01
COL2A1-201ENST00000337299 CCT5P48643 541 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 MKRN1Q9UHC7 482 aaKnown RBP15.11■□□□□ 0.01
COL2A1-201ENST00000337299 NDUFB9Q9Y6M9 179 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 RPS6KB1P23443 525 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 ST5P78524 1137 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 TRMT44Q8IYL2 757 aaKnown RBP15.11■□□□□ 0.01
COL2A1-201ENST00000337299 PHAXQ9H814 394 aaKnown RBP15.11■□□□□ 0.01
COL2A1-201ENST00000337299 FEZ2Q9UHY8 353 aaPredicted RBP15.11■□□□□ 0.01
COL2A1-201ENST00000337299 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 FRMD3A2A2Y4 597 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 CLGNO14967 610 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 IDH1O75874 414 aaKnown RBP15.11■□□□□ 0.01
COL2A1-201ENST00000337299 RXRAP19793 462 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 CABP4P57796 275 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 IFFO1Q0D2I5 559 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 DYDC1Q8WWB3 177 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 MAP3K2Q9Y2U5 619 aa15.11■□□□□ 0.01
COL2A1-201ENST00000337299 UHRF1BP1LA0JNW5 1464 aa15.1■□□□□ 0.01
COL2A1-201ENST00000337299 NEBLO76041 1014 aa15.1■□□□□ 0.01
COL2A1-201ENST00000337299 CLNS1AP54105 237 aaKnown RBP15.1■□□□□ 0.01
COL2A1-201ENST00000337299 HSPA2P54652 639 aa15.1■□□□□ 0.01
COL2A1-201ENST00000337299 CCT6AP40227 531 aaKnown RBP15.1■□□□□ 0.01
COL2A1-201ENST00000337299 CCDC121Q6ZUS5 278 aa15.1■□□□□ 0.01
COL2A1-201ENST00000337299 PARD6BQ9BYG5 372 aa15.1■□□□□ 0.01
COL2A1-201ENST00000337299 IFIT1P09914 478 aaKnown RBP15.09■□□□□ 0.01
COL2A1-201ENST00000337299 ALG1Q9BT22 464 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 PPP2R2CQ9Y2T4 447 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 RIMS2Q9UQ26 1411 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 A0A1W2PP64 1363 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 ZNF202O95125 648 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 GPIHBP1Q8IV16 184 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 FAM204AQ9H8W3 233 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 GCC2Q8IWJ2 1684 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 TDRD12Q587J7 1177 aaKnown RBP15.09■□□□□ 0.01
COL2A1-201ENST00000337299 WWC2Q6AWC2 1192 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 TAF4BQ92750 862 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 CHPF2Q9P2E5 772 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL2A1-201ENST00000337299 AKR1B15C9JRZ8 316 aaPredicted RBP15.09■□□□□ 0.01
COL2A1-201ENST00000337299 CCDC178Q5BJE1 867 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 BCAS4Q8TDM0 211 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 IFT81Q8WYA0 676 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 BICC1Q9H694 974 aaKnown RBP15.09■□□□□ 0.01
COL2A1-201ENST00000337299 TBC1D2BQ9UPU7 963 aa15.09■□□□□ 0.01
COL2A1-201ENST00000337299 HPDP32754 393 aaPredicted RBP15.08■□□□□ 0
COL2A1-201ENST00000337299 IARSP41252 1262 aaKnown RBP15.08■□□□□ 0
COL2A1-201ENST00000337299 MAP2K1Q02750 393 aaPredicted RBP15.08■□□□□ 0
COL2A1-201ENST00000337299 IGSF22Q8N9C0 903 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 AK9Q5TCS8 1911 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 DPCR1Q3MIW9 517 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 RGS22Q8NE09 1264 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 CABLES1Q8TDN4 633 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 PSMB7Q99436 277 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 MYD88Q99836 296 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 CYP2C19P33261 490 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 EDC3Q96F86 508 aaKnown RBP15.08■□□□□ 0
COL2A1-201ENST00000337299 SLC26A6Q9BXS9 759 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 GOPCQ9HD26 462 aa15.08■□□□□ 0
COL2A1-201ENST00000337299 NFE2L3Q9Y4A8 694 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms