RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 WASHC4Q2M389 1173 aa12.75□□□□□ -0.37
LRAT-201ENST00000336356 CWC27Q6UX04 472 aaKnown RBP12.75□□□□□ -0.37
LRAT-201ENST00000336356 SPTY2D1Q68D10 685 aaPredicted RBP12.74□□□□□ -0.37
LRAT-201ENST00000336356 GPT2Q8TD30 523 aa12.74□□□□□ -0.37
LRAT-201ENST00000336356 MNAT1P51948 309 aa12.74□□□□□ -0.37
LRAT-201ENST00000336356 MTHFSDQ2M296 383 aaKnown RBP12.74□□□□□ -0.37
LRAT-201ENST00000336356 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.74□□□□□ -0.37
LRAT-201ENST00000336356 UBR1Q8IWV7 1749 aa12.74□□□□□ -0.37
LRAT-201ENST00000336356 RAB11FIP3O75154 756 aa12.74□□□□□ -0.37
LRAT-201ENST00000336356 CCDC91Q7Z6B0 441 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 PALLDQ8WX93 1383 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 TOP1P11387 765 aaKnown RBP12.73□□□□□ -0.37
LRAT-201ENST00000336356 TUBB4BP68371 445 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 STK3Q13188 491 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 ARHGEF6Q15052 776 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
LRAT-201ENST00000336356 KRBA2Q6ZNG9 492 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 TMC6Q7Z403 805 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 GTF3C6Q969F1 213 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 NEUROD6Q96NK8 337 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 MROH1Q8NDA8 1641 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 KIF5CO60282 957 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 CAPN2P17655 700 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 R3HDM1Q15032 1099 aaKnown RBP12.73□□□□□ -0.37
LRAT-201ENST00000336356 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 RASSF8Q8NHQ8 419 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 DACT1Q9NYF0 836 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 CCDC69A6NI79 296 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 GLRX3O76003 335 aaKnown RBP12.73□□□□□ -0.37
LRAT-201ENST00000336356 SLC5A1P13866 664 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 SAFBQ15424 915 aaKnown RBP eCLIP12.73□□□□□ -0.37
LRAT-201ENST00000336356 IQCEQ6IPM2 695 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 CLEC17AQ6ZS10 378 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 DNAI1Q9UI46 699 aa12.73□□□□□ -0.37
LRAT-201ENST00000336356 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
LRAT-201ENST00000336356 IL6STP40189 918 aaPredicted RBP12.72□□□□□ -0.37
LRAT-201ENST00000336356 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
LRAT-201ENST00000336356 PDE1AP54750 535 aa12.72□□□□□ -0.37
LRAT-201ENST00000336356 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
LRAT-201ENST00000336356 PTPRCP08575 1304 aa12.72□□□□□ -0.37
LRAT-201ENST00000336356 RPS6KA4O75676 772 aa12.72□□□□□ -0.37
LRAT-201ENST00000336356 MYD88Q99836 296 aa12.72□□□□□ -0.37
LRAT-201ENST00000336356 MTFR1LQ9H019 292 aa12.72□□□□□ -0.37
LRAT-201ENST00000336356 ZNF142P52746 1687 aaPredicted RBP12.72□□□□□ -0.37
LRAT-201ENST00000336356 IL13P35225 146 aa12.72□□□□□ -0.37
LRAT-201ENST00000336356 DNM1Q05193 864 aaKnown RBP12.72□□□□□ -0.37
LRAT-201ENST00000336356 ZNF287Q9HBT7 754 aa12.72□□□□□ -0.37
LRAT-201ENST00000336356 PIM2Q9P1W9 311 aa12.72□□□□□ -0.37
LRAT-201ENST00000336356 TNNI2P48788 182 aa12.71□□□□□ -0.37
LRAT-201ENST00000336356 KIF1BPQ96EK5 621 aa12.71□□□□□ -0.37
LRAT-201ENST00000336356 GPTP24298 496 aa12.71□□□□□ -0.37
LRAT-201ENST00000336356 TRDNQ13061 729 aa12.71□□□□□ -0.37
LRAT-201ENST00000336356 C2CD5Q86YS7 1000 aa12.71□□□□□ -0.37
LRAT-201ENST00000336356 IL1RAPL2Q9NP60 686 aa12.71□□□□□ -0.37
LRAT-201ENST00000336356 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.37
LRAT-201ENST00000336356 ELF2Q15723 593 aa12.71□□□□□ -0.38
LRAT-201ENST00000336356 MICALCLQ6ZW33 695 aa12.71□□□□□ -0.38
LRAT-201ENST00000336356 ZNF804AQ7Z570 1209 aa12.71□□□□□ -0.38
LRAT-201ENST00000336356 RSPH14Q9UHP6 348 aa12.71□□□□□ -0.38
LRAT-201ENST00000336356 SH3TC1Q8TE82 1336 aa12.71□□□□□ -0.38
LRAT-201ENST00000336356 KIF4BQ2VIQ3 1234 aa12.71□□□□□ -0.38
LRAT-201ENST00000336356 PRPF40BQ6NWY9 871 aaKnown RBP12.71□□□□□ -0.38
LRAT-201ENST00000336356 KIAA1524Q8TCG1 905 aa12.71□□□□□ -0.38
LRAT-201ENST00000336356 DNAJC25Q9H1X3 360 aa12.71□□□□□ -0.38
LRAT-201ENST00000336356 LUZP1Q86V48 1076 aa12.7□□□□□ -0.38
LRAT-201ENST00000336356 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
LRAT-201ENST00000336356 GNG11P61952 73 aa12.7□□□□□ -0.38
LRAT-201ENST00000336356 CDK12Q9NYV4 1490 aaPredicted RBP12.7□□□□□ -0.38
LRAT-201ENST00000336356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.7□□□□□ -0.38
LRAT-201ENST00000336356 MAP4K4O95819 1239 aaPredicted RBP12.7□□□□□ -0.38
LRAT-201ENST00000336356 TUBBP07437 444 aa12.7□□□□□ -0.38
LRAT-201ENST00000336356 ZSCAN20P17040 1043 aaPredicted RBP12.7□□□□□ -0.38
LRAT-201ENST00000336356 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
LRAT-201ENST00000336356 METTL24Q5JXM2 366 aa12.7□□□□□ -0.38
LRAT-201ENST00000336356 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
LRAT-201ENST00000336356 ZSCAN16Q9H4T2 348 aaPredicted RBP12.7□□□□□ -0.38
LRAT-201ENST00000336356 NCAPD2Q15021 1401 aa12.7□□□□□ -0.38
LRAT-201ENST00000336356 CCDC148Q8NFR7 591 aa12.7□□□□□ -0.38
LRAT-201ENST00000336356 POLR1AO95602 1720 aaPredicted RBP12.69□□□□□ -0.38
LRAT-201ENST00000336356 H7C1D1 291 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 EPB41L2O43491 1005 aaKnown RBP12.69□□□□□ -0.38
LRAT-201ENST00000336356 ZNF75DP51815 510 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 TTC39AQ5SRH9 613 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
LRAT-201ENST00000336356 PCMTD1Q96MG8 357 aaPredicted RBP12.69□□□□□ -0.38
LRAT-201ENST00000336356 DDX21Q9NR30 783 aaKnown RBP eCLIP12.69□□□□□ -0.38
LRAT-201ENST00000336356 PRDM4Q9UKN5 801 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 ALDH1L1O75891 902 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 GSTO1P78417 241 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 AKAP17AQ02040 695 aaKnown RBP12.69□□□□□ -0.38
LRAT-201ENST00000336356 RALYLQ86SE5 291 aaKnown RBP12.69□□□□□ -0.38
LRAT-201ENST00000336356 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 SYT1P21579 422 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 SLC15A2Q16348 729 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 RTKN2Q8IZC4 609 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 PLSCR1O15162 318 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms