RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 NT5DC1Q5TFE4 455 aa10.36□□□□□ -0.75
CPNE8-201ENST00000331366 TSHZ3Q63HK5 1081 aa10.36□□□□□ -0.75
CPNE8-201ENST00000331366 DHX32Q7L7V1 743 aaKnown RBP10.36□□□□□ -0.75
CPNE8-201ENST00000331366 TUBE1Q9UJT0 475 aa10.36□□□□□ -0.75
CPNE8-201ENST00000331366 CDK5RAP2Q96SN8 1893 aa10.36□□□□□ -0.75
CPNE8-201ENST00000331366 PRPF40BQ6NWY9 871 aaKnown RBP10.36□□□□□ -0.75
CPNE8-201ENST00000331366 BRAPQ7Z569 592 aa10.36□□□□□ -0.75
CPNE8-201ENST00000331366 DHX40Q8IX18 779 aaKnown RBP10.36□□□□□ -0.75
CPNE8-201ENST00000331366 FMR1NBQ8N0W7 255 aaPredicted RBP10.36□□□□□ -0.75
CPNE8-201ENST00000331366 UBXN6Q9BZV1 441 aa10.36□□□□□ -0.75
CPNE8-201ENST00000331366 IL1RAPL2Q9NP60 686 aa10.36□□□□□ -0.75
CPNE8-201ENST00000331366 SPG7Q9UQ90 795 aa10.36□□□□□ -0.75
CPNE8-201ENST00000331366 C1orf141Q5JVX7 400 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 KIF20AO95235 890 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 HCLS1P14317 486 aaPredicted RBP10.35□□□□□ -0.75
CPNE8-201ENST00000331366 GABPB1Q06547 395 aaPredicted RBP10.35□□□□□ -0.75
CPNE8-201ENST00000331366 TEFQ10587 303 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 SEMA3FQ13275 785 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 STX1AQ16623 288 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 ZSCAN25Q6NSZ9 544 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 CWC27Q6UX04 472 aaKnown RBP10.35□□□□□ -0.75
CPNE8-201ENST00000331366 NEK1Q96PY6 1258 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 ZSCAN20P17040 1043 aaPredicted RBP10.35□□□□□ -0.75
CPNE8-201ENST00000331366 GSDMDP57764 484 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 ADALQ6DHV7 355 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 ZNF589Q86UQ0 364 aaPredicted RBP10.35□□□□□ -0.75
CPNE8-201ENST00000331366 AACSQ86V21 672 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 CCDC191Q8NCU4 936 aa10.35□□□□□ -0.75
CPNE8-201ENST00000331366 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.35□□□□□ -0.75
CPNE8-201ENST00000331366 IL15P40933 162 aaPredicted RBP10.34□□□□□ -0.75
CPNE8-201ENST00000331366 CCZ1BP86790 482 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 CCZ1P86791 482 aaPredicted RBP10.34□□□□□ -0.75
CPNE8-201ENST00000331366 FAM160A1Q05DH4 1040 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 G3BP1Q13283 466 aaKnown RBP eCLIP10.34□□□□□ -0.75
CPNE8-201ENST00000331366 CCDC83Q8IWF9 413 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 FAM227BQ96M60 508 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 SPATA31A3Q5VYP0 1347 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 ATP8B1O43520 1251 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 PPP6R2O75170 966 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 LIG1P18858 919 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 IFNL2Q8IZJ0 200 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 CCDC88AQ3V6T2 1871 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 CYP21A2P08686 494 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 PSME1Q06323 249 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 LARP1BQ659C4 914 aaKnown RBP10.34□□□□□ -0.75
CPNE8-201ENST00000331366 STOX1Q6ZVD7 989 aa10.34□□□□□ -0.75
CPNE8-201ENST00000331366 MB21D2Q8IYB1 491 aaPredicted RBP10.34□□□□□ -0.75
CPNE8-201ENST00000331366 R3HCC1Q9Y3T6 440 aaKnown RBP10.34□□□□□ -0.75
CPNE8-201ENST00000331366 LY75O60449 1722 aa10.33□□□□□ -0.76
CPNE8-201ENST00000331366 SCRN1Q12765 414 aa10.33□□□□□ -0.76
CPNE8-201ENST00000331366 EPHA10Q5JZY3 1008 aa10.33□□□□□ -0.76
CPNE8-201ENST00000331366 FAM177A1Q8N128 213 aaPredicted RBP10.33□□□□□ -0.76
CPNE8-201ENST00000331366 PYCARDQ9ULZ3 195 aa10.33□□□□□ -0.76
CPNE8-201ENST00000331366 ZNF396Q96N95 335 aaPredicted RBP10.32□□□□□ -0.76
CPNE8-201ENST00000331366 FMNL2Q96PY5 1086 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 TLR7Q9NYK1 1049 aaKnown RBP10.32□□□□□ -0.76
CPNE8-201ENST00000331366 AXIN2Q9Y2T1 843 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 LTBP1Q14766 1721 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 LRRFIP1Q32MZ4 808 aaKnown RBP10.32□□□□□ -0.76
CPNE8-201ENST00000331366 LRRC8AQ8IWT6 810 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 C19orf44Q9H6X5 657 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 COL1A1P02452 1464 aaPredicted RBP10.32□□□□□ -0.76
CPNE8-201ENST00000331366 SOS2Q07890 1332 aaPredicted RBP10.32□□□□□ -0.76
CPNE8-201ENST00000331366 PDS5AQ29RF7 1337 aaKnown RBP10.32□□□□□ -0.76
CPNE8-201ENST00000331366 PHLPP2Q6ZVD8 1323 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 PCDH11XQ9BZA7 1347 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 PCDH11YQ9BZA8 1340 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 ZNF646O15015 1829 aaPredicted RBP10.32□□□□□ -0.76
CPNE8-201ENST00000331366 NBPF11Q86T75 865 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 SPATA20Q8TB22 786 aa10.32□□□□□ -0.76
CPNE8-201ENST00000331366 SGMS1Q86VZ5 419 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 VGLL2Q8N8G2 317 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 CHAMP1Q96JM3 812 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 ARXQ96QS3 562 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 OGFRQ9NZT2 677 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 CGNQ9P2M7 1197 aaKnown RBP10.31□□□□□ -0.76
CPNE8-201ENST00000331366 CTNNA3Q9UI47 895 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 DDX41Q9UJV9 622 aaKnown RBP10.31□□□□□ -0.76
CPNE8-201ENST00000331366 GREB1LQ9C091 1923 aaPredicted RBP10.31□□□□□ -0.76
CPNE8-201ENST00000331366 NEXNQ0ZGT2 675 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 HSD3B7Q9H2F3 369 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 C9orf78Q9NZ63 289 aaPredicted RBP10.31□□□□□ -0.76
CPNE8-201ENST00000331366 FDPSP14324 419 aaKnown RBP10.31□□□□□ -0.76
CPNE8-201ENST00000331366 NCBP1Q09161 790 aaKnown RBP10.31□□□□□ -0.76
CPNE8-201ENST00000331366 ARID5BQ14865 1188 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 ANKRD13DQ6ZTN6 518 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 CCDC150Q8NCX0 1101 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 KCNG4Q8TDN1 519 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 SPATA32Q96LK8 384 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 HPS5Q9UPZ3 1129 aa10.31□□□□□ -0.76
CPNE8-201ENST00000331366 H2AFXP16104 143 aaPredicted RBP10.3□□□□□ -0.76
CPNE8-201ENST00000331366 U2AF2P26368 475 aaKnown RBP eCLIP10.3□□□□□ -0.76
CPNE8-201ENST00000331366 ARID4AP29374 1257 aaPredicted RBP10.3□□□□□ -0.76
CPNE8-201ENST00000331366 TBX2Q13207 712 aaPredicted RBP10.3□□□□□ -0.76
CPNE8-201ENST00000331366 NCAPHQ15003 741 aa10.3□□□□□ -0.76
CPNE8-201ENST00000331366 ZNF579Q8NAF0 562 aaKnown RBP10.3□□□□□ -0.76
CPNE8-201ENST00000331366 ANO10Q9NW15 660 aa10.3□□□□□ -0.76
CPNE8-201ENST00000331366 PDIA3P30101 505 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms