RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 PARP3Q9Y6F1 533 aa15.63■□□□□ 0.09
CCDC88C-201ENST00000331194 COL15A1P39059 1388 aa15.63■□□□□ 0.09
CCDC88C-201ENST00000331194 DLC1Q96QB1 1528 aa15.63■□□□□ 0.09
CCDC88C-201ENST00000331194 ANKRD65E5RJM6 399 aa15.63■□□□□ 0.09
CCDC88C-201ENST00000331194 H3BQF6 201 aa15.63■□□□□ 0.09
CCDC88C-201ENST00000331194 NEK1Q96PY6 1258 aa15.63■□□□□ 0.09
CCDC88C-201ENST00000331194 C9orf78Q9NZ63 289 aaPredicted RBP15.63■□□□□ 0.09
CCDC88C-201ENST00000331194 CEP170BQ9Y4F5 1589 aaPredicted RBP15.63■□□□□ 0.09
CCDC88C-201ENST00000331194 NRXN3Q9Y4C0 1643 aa15.63■□□□□ 0.09
CCDC88C-201ENST00000331194 ADGRL3Q9HAR2 1447 aa15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 TAF5LO75529 589 aa15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 FOXR1Q6PIV2 292 aa15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 CHST3Q7LGC8 479 aa15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 WDR24Q96S15 920 aa15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 IMPACTQ9P2X3 320 aa15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 CCDC9Q9Y3X0 531 aaKnown RBP15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 APOBRQ0VD83 1088 aa15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 FMR1NBQ8N0W7 255 aaPredicted RBP15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 CCDC150Q8NCX0 1101 aa15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 NAT10Q9H0A0 1025 aaKnown RBP15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 TSPYL1Q9H0U9 437 aa15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 ADAM21Q9UKJ8 722 aa15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 FAM208AQ9UK61 1670 aaKnown RBP15.62■□□□□ 0.09
CCDC88C-201ENST00000331194 A0A0G2JLW4 131 aa15.61■□□□□ 0.09
CCDC88C-201ENST00000331194 BRD2P25440 801 aaKnown RBP15.61■□□□□ 0.09
CCDC88C-201ENST00000331194 NRKQ7Z2Y5 1582 aa15.61■□□□□ 0.09
CCDC88C-201ENST00000331194 MUM1L1Q5H9M0 696 aa15.61■□□□□ 0.09
CCDC88C-201ENST00000331194 NSUN7Q8NE18 718 aaKnown RBP15.61■□□□□ 0.09
CCDC88C-201ENST00000331194 TMEM232C9JQI7 657 aa15.61■□□□□ 0.09
CCDC88C-201ENST00000331194 NCAPHQ15003 741 aa15.61■□□□□ 0.09
CCDC88C-201ENST00000331194 PARD6BQ9BYG5 372 aa15.61■□□□□ 0.09
CCDC88C-201ENST00000331194 KIAA1468Q9P260 1216 aa15.61■□□□□ 0.09
CCDC88C-201ENST00000331194 PTPDC1A2A3K4 754 aa15.6■□□□□ 0.09
CCDC88C-201ENST00000331194 DHX16O60231 1041 aaKnown RBP15.6■□□□□ 0.09
CCDC88C-201ENST00000331194 POLR3DP05423 398 aaPredicted RBP15.6■□□□□ 0.09
CCDC88C-201ENST00000331194 NOP2P46087 812 aaKnown RBP15.6■□□□□ 0.09
CCDC88C-201ENST00000331194 FANCCQ00597 558 aa15.6■□□□□ 0.09
CCDC88C-201ENST00000331194 ZRSR1Q15695 479 aaKnown RBP15.6■□□□□ 0.09
CCDC88C-201ENST00000331194 GJB4Q9NTQ9 266 aa15.6■□□□□ 0.09
CCDC88C-201ENST00000331194 CYP21A2P08686 494 aa15.6■□□□□ 0.09
CCDC88C-201ENST00000331194 CRYBG1Q9Y4K1 1723 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 EFCAB8A8MWE9 144 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 STOX1Q6ZVD7 989 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 FUT8Q9BYC5 575 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 LGR6Q9HBX8 967 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 ATG3Q9NT62 314 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 CLIC4Q9Y696 253 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 C3P01024 1663 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 UBR1Q8IWV7 1749 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 LRRFIP1Q32MZ4 808 aaKnown RBP15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 ANKLE2Q86XL3 938 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 MRPS27Q92552 414 aaKnown RBP15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 PHLPP2Q6ZVD8 1323 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 VWA3AA6NCI4 1184 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 CCDC158Q5M9N0 1113 aa15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 RRP15Q9Y3B9 282 aaKnown RBP15.59■□□□□ 0.09
CCDC88C-201ENST00000331194 GNG11P61952 73 aa15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 GPS2Q13227 327 aa15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 PROSER3Q2NL68 480 aa15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 IRX2Q9BZI1 471 aaPredicted RBP15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 HSD3B7Q9H2F3 369 aa15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 MAP3K2Q9Y2U5 619 aa15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 PLEKHG1Q9ULL1 1385 aa15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 N4BP1O75113 896 aaKnown RBP15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 WWC2Q6AWC2 1192 aa15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 SMARCC2Q8TAQ2 1214 aa15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 ALDH8A1Q9H2A2 487 aaPredicted RBP15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 SUGCTQ9HAC7 445 aa15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 MED23Q9ULK4 1368 aa15.58■□□□□ 0.08
CCDC88C-201ENST00000331194 NEDD4P46934 1319 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 TEFQ10587 303 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 MCM6Q14566 821 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 SRLQ86TD4 932 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 ARFGAP3Q9NP61 516 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 MON2Q7Z3U7 1717 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 CHD2O14647 1828 aaKnown RBP15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 CASQ1P31415 396 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 G3BP1Q13283 466 aaKnown RBP eCLIP15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 SF3A1Q15459 793 aaKnown RBP15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 NBPF6Q5VWK0 638 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 FBXO18Q8NFZ0 1043 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 DDX17Q92841 729 aaKnown RBP15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 KAZALD1Q96I82 304 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 SUCLG2Q96I99 432 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 NBPF4Q96M43 638 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 TOMM22Q9NS69 142 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 OVOS2A0A0J9YW53 1432 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 OVOS2Q6IE36 1432 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 PPP2R3AQ06190 1150 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 CFAP100Q494V2 611 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 RAB11FIP4Q86YS3 637 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 PLEKHA4Q9H4M7 779 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 BICC1Q9H694 974 aaKnown RBP15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 VPS18Q9P253 973 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 HDAC5Q9UQL6 1122 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 FER1L4A9Z1Z3 1794 aa15.57■□□□□ 0.08
CCDC88C-201ENST00000331194 RGPD1P0DJD0 1748 aa15.56■□□□□ 0.08
CCDC88C-201ENST00000331194 IGSF1Q8N6C5 1336 aa15.56■□□□□ 0.08
CCDC88C-201ENST00000331194 HIP1O00291 1037 aa15.56■□□□□ 0.08
CCDC88C-201ENST00000331194 SERPINC1P01008 464 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms