RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.29
SNX20-202ENST00000330943 TMEM51Q9NW97 253 aa16.83■□□□□ 0.29
SNX20-202ENST00000330943 SLIT1O75093 1534 aa16.83■□□□□ 0.29
SNX20-202ENST00000330943 GORABQ5T7V8 394 aa16.83■□□□□ 0.28
SNX20-202ENST00000330943 CCDC150Q8NCX0 1101 aa16.83■□□□□ 0.28
SNX20-202ENST00000330943 NOL10Q9BSC4 688 aaKnown RBP16.83■□□□□ 0.28
SNX20-202ENST00000330943 ATP5JP18859 108 aa16.83■□□□□ 0.28
SNX20-202ENST00000330943 CLCN6P51797 869 aa16.83■□□□□ 0.28
SNX20-202ENST00000330943 FMR1NBQ8N0W7 255 aaPredicted RBP16.83■□□□□ 0.28
SNX20-202ENST00000330943 PCDHA7Q9UN72 937 aa16.83■□□□□ 0.28
SNX20-202ENST00000330943 IGKV5-2P06315 115 aa16.82■□□□□ 0.28
SNX20-202ENST00000330943 GTF2E1P29083 439 aaPredicted RBP16.82■□□□□ 0.28
SNX20-202ENST00000330943 MCMDC2Q4G0Z9 681 aa16.82■□□□□ 0.28
SNX20-202ENST00000330943 EPHA10Q5JZY3 1008 aa16.82■□□□□ 0.28
SNX20-202ENST00000330943 DDX46Q7L014 1031 aaKnown RBP16.82■□□□□ 0.28
SNX20-202ENST00000330943 RIC3Q7Z5B4 369 aa16.82■□□□□ 0.28
SNX20-202ENST00000330943 ILDR1Q86SU0 546 aaPredicted RBP16.82■□□□□ 0.28
SNX20-202ENST00000330943 IP6K1Q92551 441 aa16.82■□□□□ 0.28
SNX20-202ENST00000330943 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
SNX20-202ENST00000330943 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
SNX20-202ENST00000330943 ARHGAP29Q52LW3 1261 aa16.82■□□□□ 0.28
SNX20-202ENST00000330943 DHX32Q7L7V1 743 aaKnown RBP16.82■□□□□ 0.28
SNX20-202ENST00000330943 HOMER1Q86YM7 354 aa16.82■□□□□ 0.28
SNX20-202ENST00000330943 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
SNX20-202ENST00000330943 LTN1O94822 1766 aa16.81■□□□□ 0.28
SNX20-202ENST00000330943 BIN1O00499 593 aa16.81■□□□□ 0.28
SNX20-202ENST00000330943 NDUFA8P51970 172 aa16.81■□□□□ 0.28
SNX20-202ENST00000330943 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
SNX20-202ENST00000330943 ATL3Q6DD88 541 aa16.81■□□□□ 0.28
SNX20-202ENST00000330943 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.81■□□□□ 0.28
SNX20-202ENST00000330943 FHOD1Q9Y613 1164 aa16.81■□□□□ 0.28
SNX20-202ENST00000330943 NCAPD2Q15021 1401 aa16.81■□□□□ 0.28
SNX20-202ENST00000330943 PSDA5PKW4 1024 aaPredicted RBP16.81■□□□□ 0.28
SNX20-202ENST00000330943 TFCP2Q12800 502 aa16.81■□□□□ 0.28
SNX20-202ENST00000330943 PLEKHO1Q53GL0 409 aaPredicted RBP16.81■□□□□ 0.28
SNX20-202ENST00000330943 TNNI3KQ59H18 835 aa16.81■□□□□ 0.28
SNX20-202ENST00000330943 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
SNX20-202ENST00000330943 FPGT-TNNI3KV9GXZ4 949 aa16.81■□□□□ 0.28
SNX20-202ENST00000330943 CCDC93Q567U6 631 aa16.8■□□□□ 0.28
SNX20-202ENST00000330943 KIAA1468Q9P260 1216 aa16.8■□□□□ 0.28
SNX20-202ENST00000330943 NRDCO43847 1150 aa16.8■□□□□ 0.28
SNX20-202ENST00000330943 HMGB1P09429 215 aaKnown RBP16.8■□□□□ 0.28
SNX20-202ENST00000330943 PNMA6AP0CW24 399 aaPredicted RBP16.8■□□□□ 0.28
SNX20-202ENST00000330943 SF3A1Q15459 793 aaKnown RBP16.8■□□□□ 0.28
SNX20-202ENST00000330943 CALCOCO1Q9P1Z2 691 aa16.8■□□□□ 0.28
SNX20-202ENST00000330943 MRC1P22897 1456 aa16.79■□□□□ 0.28
SNX20-202ENST00000330943 LMO7Q8WWI1 1683 aa16.79■□□□□ 0.28
SNX20-202ENST00000330943 IRX5P78411 483 aaPredicted RBP16.79■□□□□ 0.28
SNX20-202ENST00000330943 CHST3Q7LGC8 479 aa16.79■□□□□ 0.28
SNX20-202ENST00000330943 DBNDD2Q9BQY9 259 aa16.79■□□□□ 0.28
SNX20-202ENST00000330943 DDX21Q9NR30 783 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNX20-202ENST00000330943 PXDNQ92626 1479 aa16.79■□□□□ 0.28
SNX20-202ENST00000330943 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
SNX20-202ENST00000330943 ADALQ6DHV7 355 aa16.79■□□□□ 0.28
SNX20-202ENST00000330943 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
SNX20-202ENST00000330943 DNAI1Q9UI46 699 aa16.79■□□□□ 0.28
SNX20-202ENST00000330943 FER1L4A9Z1Z3 1794 aa16.79■□□□□ 0.28
SNX20-202ENST00000330943 LAMA4Q16363 1823 aa16.78■□□□□ 0.28
SNX20-202ENST00000330943 SALL1Q9NSC2 1324 aa16.78■□□□□ 0.28
SNX20-202ENST00000330943 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
SNX20-202ENST00000330943 MYL6BP14649 208 aa16.78■□□□□ 0.28
SNX20-202ENST00000330943 CDK11BP21127 795 aaKnown RBP16.78■□□□□ 0.28
SNX20-202ENST00000330943 STK38Q15208 465 aa16.78■□□□□ 0.28
SNX20-202ENST00000330943 CARMIL3Q8ND23 1372 aa16.78■□□□□ 0.28
SNX20-202ENST00000330943 TPM4P67936 248 aa16.78■□□□□ 0.28
SNX20-202ENST00000330943 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
SNX20-202ENST00000330943 A0A0G2JLW4 131 aa16.77■□□□□ 0.28
SNX20-202ENST00000330943 FAM193AP78312 1265 aa16.77■□□□□ 0.28
SNX20-202ENST00000330943 GCKRQ14397 625 aa16.77■□□□□ 0.28
SNX20-202ENST00000330943 OTUD7BQ6GQQ9 843 aa16.77■□□□□ 0.28
SNX20-202ENST00000330943 UBXN4Q92575 508 aa16.77■□□□□ 0.28
SNX20-202ENST00000330943 MYD88Q99836 296 aa16.77■□□□□ 0.28
SNX20-202ENST00000330943 RTEL1Q9NZ71 1219 aa16.77■□□□□ 0.28
SNX20-202ENST00000330943 CLIC4Q9Y696 253 aa16.77■□□□□ 0.28
SNX20-202ENST00000330943 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.27
SNX20-202ENST00000330943 CYP2C19P33261 490 aa16.77■□□□□ 0.27
SNX20-202ENST00000330943 PLA2G4AP47712 749 aa16.77■□□□□ 0.27
SNX20-202ENST00000330943 ETF1P62495 437 aaKnown RBP16.77■□□□□ 0.27
SNX20-202ENST00000330943 CREBRFQ8IUR6 639 aa16.77■□□□□ 0.27
SNX20-202ENST00000330943 RFX7Q2KHR2 1363 aa16.77■□□□□ 0.27
SNX20-202ENST00000330943 HEG1Q9ULI3 1381 aa16.77■□□□□ 0.27
SNX20-202ENST00000330943 POLR3DP05423 398 aaPredicted RBP16.76■□□□□ 0.27
SNX20-202ENST00000330943 SLC3A2P08195 630 aaKnown RBP16.76■□□□□ 0.27
SNX20-202ENST00000330943 PDIA3P30101 505 aaKnown RBP16.76■□□□□ 0.27
SNX20-202ENST00000330943 KCNJ6P48051 423 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 HAUS7Q99871 368 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 ABCC6O95255 1503 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 A0A1W2PQ27 194 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 A0A1W2PQ64 194 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 A0A1W2PQD8 194 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 EXOSC10Q01780 885 aaKnown RBP16.76■□□□□ 0.27
SNX20-202ENST00000330943 PDIA6Q15084 440 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 ISM2Q6H9L7 571 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 TMCO3Q6UWJ1 677 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 LINC00301Q8NCQ3 95 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 MNS1Q8NEH6 495 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 COPRSQ9NQ92 184 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 ARGLU1Q9NWB6 273 aaPredicted RBP16.76■□□□□ 0.27
SNX20-202ENST00000330943 ANKARQ7Z5J8 1434 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms