RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ANKRD2Q9GZV1 360 aa18.66■□□□□ 0.58
PRPF3-201ENST00000324862 IFIT1P09914 478 aaKnown RBP18.66■□□□□ 0.58
PRPF3-201ENST00000324862 SP8Q8IXZ3 490 aa18.66■□□□□ 0.58
PRPF3-201ENST00000324862 A0A1B0GUL6 1792 aa18.66■□□□□ 0.58
PRPF3-201ENST00000324862 SLX4Q8IY92 1834 aa18.66■□□□□ 0.58
PRPF3-201ENST00000324862 CACNA1SQ13698 1873 aa18.66■□□□□ 0.58
PRPF3-201ENST00000324862 C21orf2O43822 256 aa18.65■□□□□ 0.58
PRPF3-201ENST00000324862 CHGBP05060 677 aa18.65■□□□□ 0.58
PRPF3-201ENST00000324862 ATP5JP18859 108 aa18.65■□□□□ 0.58
PRPF3-201ENST00000324862 UBE4AQ14139 1066 aa18.65■□□□□ 0.58
PRPF3-201ENST00000324862 TTC39AQ5SRH9 613 aa18.65■□□□□ 0.58
PRPF3-201ENST00000324862 XDHP47989 1333 aa18.65■□□□□ 0.58
PRPF3-201ENST00000324862 UFL1O94874 794 aa18.65■□□□□ 0.58
PRPF3-201ENST00000324862 ANTXR1Q9H6X2 564 aa18.65■□□□□ 0.58
PRPF3-201ENST00000324862 ERC2O15083 957 aa18.64■□□□□ 0.58
PRPF3-201ENST00000324862 MCAMP43121 646 aa18.64■□□□□ 0.58
PRPF3-201ENST00000324862 CCDC158Q5M9N0 1113 aa18.64■□□□□ 0.58
PRPF3-201ENST00000324862 CNKSR1Q969H4 720 aa18.64■□□□□ 0.58
PRPF3-201ENST00000324862 FAM84BQ96KN1 310 aaPredicted RBP18.64■□□□□ 0.58
PRPF3-201ENST00000324862 AOX1Q06278 1338 aa18.64■□□□□ 0.58
PRPF3-201ENST00000324862 TBC1D16Q8TBP0 767 aa18.64■□□□□ 0.57
PRPF3-201ENST00000324862 C7orf43Q8WVR3 580 aa18.64■□□□□ 0.57
PRPF3-201ENST00000324862 IRS2Q9Y4H2 1338 aa18.63■□□□□ 0.57
PRPF3-201ENST00000324862 SEC24BO95487 1268 aa18.63■□□□□ 0.57
PRPF3-201ENST00000324862 FKBP4Q02790 459 aaKnown RBP eCLIP18.63■□□□□ 0.57
PRPF3-201ENST00000324862 TTLL6Q8N841 843 aa18.63■□□□□ 0.57
PRPF3-201ENST00000324862 C6orf229H3BNL8 230 aa18.63■□□□□ 0.57
PRPF3-201ENST00000324862 GGA1Q9UJY5 639 aa18.63■□□□□ 0.57
PRPF3-201ENST00000324862 JAG2Q9Y219 1238 aa18.63■□□□□ 0.57
PRPF3-201ENST00000324862 ZAP70P43403 619 aa18.62■□□□□ 0.57
PRPF3-201ENST00000324862 TGFB2P61812 414 aa18.62■□□□□ 0.57
PRPF3-201ENST00000324862 RASGRF1Q13972 1273 aa18.62■□□□□ 0.57
PRPF3-201ENST00000324862 GOLIM4O00461 696 aa18.62■□□□□ 0.57
PRPF3-201ENST00000324862 RIMBP2O15034 1052 aa18.62■□□□□ 0.57
PRPF3-201ENST00000324862 SLFNL1Q499Z3 407 aa18.62■□□□□ 0.57
PRPF3-201ENST00000324862 MPNDQ8N594 471 aa18.62■□□□□ 0.57
PRPF3-201ENST00000324862 HAUS7Q99871 368 aa18.62■□□□□ 0.57
PRPF3-201ENST00000324862 DPP8Q6V1X1 898 aaPredicted RBP18.61■□□□□ 0.57
PRPF3-201ENST00000324862 PELP1Q8IZL8 1130 aaKnown RBP18.61■□□□□ 0.57
PRPF3-201ENST00000324862 PODXL2Q9NZ53 605 aa18.61■□□□□ 0.57
PRPF3-201ENST00000324862 KIAA1551Q9HCM1 1747 aa18.61■□□□□ 0.57
PRPF3-201ENST00000324862 KIF13BQ9NQT8 1826 aa18.61■□□□□ 0.57
PRPF3-201ENST00000324862 TBC1D9Q6ZT07 1266 aa18.61■□□□□ 0.57
PRPF3-201ENST00000324862 FHDC1Q9C0D6 1143 aaPredicted RBP18.61■□□□□ 0.57
PRPF3-201ENST00000324862 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
PRPF3-201ENST00000324862 CD2APQ9Y5K6 639 aa18.61■□□□□ 0.57
PRPF3-201ENST00000324862 DUOX1Q9NRD9 1551 aa18.6■□□□□ 0.57
PRPF3-201ENST00000324862 VPS37DQ86XT2 251 aa18.6■□□□□ 0.57
PRPF3-201ENST00000324862 BACH2Q9BYV9 841 aa18.6■□□□□ 0.57
PRPF3-201ENST00000324862 HMG20BQ9P0W2 317 aa18.6■□□□□ 0.57
PRPF3-201ENST00000324862 PIM2Q9P1W9 311 aa18.6■□□□□ 0.57
PRPF3-201ENST00000324862 LRRC37AA6NMS7 1700 aa18.6■□□□□ 0.57
PRPF3-201ENST00000324862 TMC4Q7Z404 712 aa18.6■□□□□ 0.57
PRPF3-201ENST00000324862 ATP2B4P23634 1241 aa18.59■□□□□ 0.57
PRPF3-201ENST00000324862 ARID4AP29374 1257 aaPredicted RBP18.59■□□□□ 0.57
PRPF3-201ENST00000324862 CAVIN4Q5BKX8 364 aa18.59■□□□□ 0.57
PRPF3-201ENST00000324862 FBXO33Q7Z6M2 555 aa18.59■□□□□ 0.57
PRPF3-201ENST00000324862 IL25Q9H293 177 aa18.59■□□□□ 0.57
PRPF3-201ENST00000324862 PAG1Q9NWQ8 432 aa18.59■□□□□ 0.57
PRPF3-201ENST00000324862 COL1A1P02452 1464 aaPredicted RBP18.59■□□□□ 0.57
PRPF3-201ENST00000324862 SOCS7O14512 581 aa18.59■□□□□ 0.57
PRPF3-201ENST00000324862 CNTROBQ8N137 903 aa18.59■□□□□ 0.57
PRPF3-201ENST00000324862 CYP2E1P05181 493 aaPredicted RBP18.58■□□□□ 0.57
PRPF3-201ENST00000324862 HIBADHP31937 336 aaKnown RBP18.58■□□□□ 0.57
PRPF3-201ENST00000324862 LTBP1Q14766 1721 aa18.58■□□□□ 0.56
PRPF3-201ENST00000324862 ARAP2Q8WZ64 1704 aa18.58■□□□□ 0.56
PRPF3-201ENST00000324862 SPATA5Q8NB90 893 aa18.58■□□□□ 0.56
PRPF3-201ENST00000324862 TMX4Q9H1E5 349 aaPredicted RBP18.58■□□□□ 0.56
PRPF3-201ENST00000324862 BCS1LQ9Y276 419 aa18.58■□□□□ 0.56
PRPF3-201ENST00000324862 SNED1Q8TER0 1413 aa18.57■□□□□ 0.56
PRPF3-201ENST00000324862 EVI5LQ96CN4 794 aa18.57■□□□□ 0.56
PRPF3-201ENST00000324862 FSD1Q9BTV5 496 aa18.57■□□□□ 0.56
PRPF3-201ENST00000324862 DLEC1Q9Y238 1755 aa18.57■□□□□ 0.56
PRPF3-201ENST00000324862 CDC45O75419 566 aa18.57■□□□□ 0.56
PRPF3-201ENST00000324862 DALRD3Q5D0E6 543 aaKnown RBP18.57■□□□□ 0.56
PRPF3-201ENST00000324862 PIH1D3Q9NQM4 214 aaKnown RBP18.57■□□□□ 0.56
PRPF3-201ENST00000324862 DOK7Q18PE1 504 aa18.56■□□□□ 0.56
PRPF3-201ENST00000324862 WASHC4Q2M389 1173 aa18.56■□□□□ 0.56
PRPF3-201ENST00000324862 ZNF512BQ96KM6 892 aaPredicted RBP18.56■□□□□ 0.56
PRPF3-201ENST00000324862 FRAT2O75474 233 aaPredicted RBP18.55■□□□□ 0.56
PRPF3-201ENST00000324862 CHMLP26374 656 aa18.55■□□□□ 0.56
PRPF3-201ENST00000324862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.55■□□□□ 0.56
PRPF3-201ENST00000324862 UQCRFS1P1P0C7P4 283 aa18.55■□□□□ 0.56
PRPF3-201ENST00000324862 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
PRPF3-201ENST00000324862 FAM227BQ96M60 508 aa18.54■□□□□ 0.56
PRPF3-201ENST00000324862 CD209Q9NNX6 404 aa18.54■□□□□ 0.56
PRPF3-201ENST00000324862 CWC27Q6UX04 472 aaKnown RBP18.54■□□□□ 0.56
PRPF3-201ENST00000324862 SYT17Q9BSW7 474 aa18.54■□□□□ 0.56
PRPF3-201ENST00000324862 ZC3H12CQ9C0D7 883 aaKnown RBP18.54■□□□□ 0.56
PRPF3-201ENST00000324862 DBNDD1Q9H9R9 158 aa18.54■□□□□ 0.56
PRPF3-201ENST00000324862 AKAP11Q9UKA4 1901 aa18.54■□□□□ 0.56
PRPF3-201ENST00000324862 AOC3Q16853 763 aa18.53■□□□□ 0.56
PRPF3-201ENST00000324862 KBTBD3Q8NAB2 608 aa18.53■□□□□ 0.56
PRPF3-201ENST00000324862 SEC62Q99442 399 aaKnown RBP18.53■□□□□ 0.56
PRPF3-201ENST00000324862 KCNQ5Q9NR82 932 aa18.53■□□□□ 0.56
PRPF3-201ENST00000324862 MED23Q9ULK4 1368 aa18.53■□□□□ 0.56
PRPF3-201ENST00000324862 MFAP1P55081 439 aaKnown RBP18.53■□□□□ 0.56
PRPF3-201ENST00000324862 CCDC93Q567U6 631 aa18.53■□□□□ 0.56
PRPF3-201ENST00000324862 GNL3LQ9NVN8 582 aaKnown RBP18.53■□□□□ 0.56
PRPF3-201ENST00000324862 IDH1O75874 414 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms