RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 CNTNAP1P78357 1384 aa22.29■■□□□ 1.16
TYMS-202ENST00000323250 USP17L3A6NCW0 530 aa22.29■■□□□ 1.16
TYMS-202ENST00000323250 USP17L4A6NCW7 530 aa22.29■■□□□ 1.16
TYMS-202ENST00000323250 CT47B1P0C2W7 299 aaPredicted RBP22.29■■□□□ 1.16
TYMS-202ENST00000323250 RARSP54136 660 aaKnown RBP22.29■■□□□ 1.16
TYMS-202ENST00000323250 USP17L1Q7RTZ2 530 aa22.29■■□□□ 1.16
TYMS-202ENST00000323250 PUS3Q9BZE2 481 aaKnown RBP22.29■■□□□ 1.16
TYMS-202ENST00000323250 ASTN2O75129 1339 aaPredicted RBP22.29■■□□□ 1.16
TYMS-202ENST00000323250 RABL6Q3YEC7 729 aaPredicted RBP22.28■■□□□ 1.16
TYMS-202ENST00000323250 DACT2Q5SW24 774 aa22.28■■□□□ 1.16
TYMS-202ENST00000323250 LDHAL6AQ6ZMR3 332 aa22.28■■□□□ 1.16
TYMS-202ENST00000323250 COA1Q9GZY4 146 aa22.28■■□□□ 1.16
TYMS-202ENST00000323250 VEGFBP49765 207 aa22.27■■□□□ 1.16
TYMS-202ENST00000323250 ZNF280AP59817 542 aaPredicted RBP22.27■■□□□ 1.16
TYMS-202ENST00000323250 AGBL3Q8NEM8 1001 aa22.27■■□□□ 1.16
TYMS-202ENST00000323250 ZNF609O15014 1411 aa22.26■■□□□ 1.15
TYMS-202ENST00000323250 KCNJ4P48050 445 aa22.26■■□□□ 1.15
TYMS-202ENST00000323250 BRPF1P55201 1214 aaPredicted RBP22.26■■□□□ 1.15
TYMS-202ENST00000323250 TAF7LQ5H9L4 462 aa22.26■■□□□ 1.15
TYMS-202ENST00000323250 USP48Q86UV5 1035 aa22.26■■□□□ 1.15
TYMS-202ENST00000323250 PLIN1O60240 522 aa22.25■■□□□ 1.15
TYMS-202ENST00000323250 KIF4BQ2VIQ3 1234 aa22.25■■□□□ 1.15
TYMS-202ENST00000323250 CNNM1Q9NRU3 951 aa22.25■■□□□ 1.15
TYMS-202ENST00000323250 RASSF10A6NK89 507 aa22.24■■□□□ 1.15
TYMS-202ENST00000323250 HNRNPUQ00839 825 aaKnown RBP eCLIP22.24■■□□□ 1.15
TYMS-202ENST00000323250 C15orf52Q6ZUT6 534 aaKnown RBP22.24■■□□□ 1.15
TYMS-202ENST00000323250 CDC37L1Q7L3B6 337 aa22.24■■□□□ 1.15
TYMS-202ENST00000323250 FBXW7Q969H0 707 aa22.24■■□□□ 1.15
TYMS-202ENST00000323250 CD209Q9NNX6 404 aa22.24■■□□□ 1.15
TYMS-202ENST00000323250 ABT1Q9ULW3 272 aaKnown RBP22.24■■□□□ 1.15
TYMS-202ENST00000323250 CELF2O95319 508 aaKnown RBP22.23■■□□□ 1.15
TYMS-202ENST00000323250 USP17L8P0C7I0 530 aa22.23■■□□□ 1.15
TYMS-202ENST00000323250 DEFB115Q30KQ5 88 aa22.23■■□□□ 1.15
TYMS-202ENST00000323250 STRIP1Q5VSL9 837 aa22.23■■□□□ 1.15
TYMS-202ENST00000323250 KLHDC4Q8TBB5 520 aa22.23■■□□□ 1.15
TYMS-202ENST00000323250 RIPOR2Q9Y4F9 1068 aa22.23■■□□□ 1.15
TYMS-202ENST00000323250 ADM5C9JUS6 153 aa22.22■■□□□ 1.15
TYMS-202ENST00000323250 GTF2IP78347 998 aa22.22■■□□□ 1.15
TYMS-202ENST00000323250 LRRC24Q50LG9 513 aa22.22■■□□□ 1.15
TYMS-202ENST00000323250 PSME4Q14997 1843 aa22.22■■□□□ 1.15
TYMS-202ENST00000323250 HSPA1AP0DMV8 641 aaKnown RBP22.21■■□□□ 1.15
TYMS-202ENST00000323250 HSPA1BP0DMV9 641 aaKnown RBP22.21■■□□□ 1.15
TYMS-202ENST00000323250 SCARF1Q14162 830 aa22.21■■□□□ 1.15
TYMS-202ENST00000323250 TTLL5Q6EMB2 1281 aa22.21■■□□□ 1.15
TYMS-202ENST00000323250 KRT26Q7Z3Y9 468 aa22.21■■□□□ 1.15
TYMS-202ENST00000323250 MYOZ2Q9NPC6 264 aa22.21■■□□□ 1.15
TYMS-202ENST00000323250 TNNQ9UQP3 1299 aa22.21■■□□□ 1.15
TYMS-202ENST00000323250 ZNF646O15015 1829 aaPredicted RBP22.21■■□□□ 1.15
TYMS-202ENST00000323250 A0A1B0GUL6 1792 aa22.2■■□□□ 1.14
TYMS-202ENST00000323250 BCAR3O75815 825 aa22.2■■□□□ 1.14
TYMS-202ENST00000323250 API5Q9BZZ5 524 aaKnown RBP22.2■■□□□ 1.14
TYMS-202ENST00000323250 ZNF408Q9H9D4 720 aa22.2■■□□□ 1.14
TYMS-202ENST00000323250 GGA3Q9NZ52 723 aa22.2■■□□□ 1.14
TYMS-202ENST00000323250 TLL2Q9Y6L7 1015 aa22.2■■□□□ 1.14
TYMS-202ENST00000323250 RFX5P48382 616 aaPredicted RBP22.19■■□□□ 1.14
TYMS-202ENST00000323250 CERS5Q8N5B7 392 aa22.19■■□□□ 1.14
TYMS-202ENST00000323250 SCAF8Q9UPN6 1271 aaKnown RBP22.19■■□□□ 1.14
TYMS-202ENST00000323250 IL1R1P14778 569 aa22.18■■□□□ 1.14
TYMS-202ENST00000323250 NBPF9Q3BBW0 867 aa22.18■■□□□ 1.14
TYMS-202ENST00000323250 ANGEL2Q5VTE6 544 aaKnown RBP22.18■■□□□ 1.14
TYMS-202ENST00000323250 SAPCD2Q86UD0 394 aa22.18■■□□□ 1.14
TYMS-202ENST00000323250 DCPSQ96C86 337 aaKnown RBP22.18■■□□□ 1.14
TYMS-202ENST00000323250 JAG2Q9Y219 1238 aa22.18■■□□□ 1.14
TYMS-202ENST00000323250 WDR33Q9C0J8 1336 aaKnown RBP22.17■■□□□ 1.14
TYMS-202ENST00000323250 CYP4F22Q6NT55 531 aa22.17■■□□□ 1.14
TYMS-202ENST00000323250 GYG1P46976 350 aa22.16■■□□□ 1.14
TYMS-202ENST00000323250 UBE4AQ14139 1066 aa22.16■■□□□ 1.14
TYMS-202ENST00000323250 ZNF804AQ7Z570 1209 aa22.16■■□□□ 1.14
TYMS-202ENST00000323250 KIAA0825Q8IV33 1275 aa22.16■■□□□ 1.14
TYMS-202ENST00000323250 VGLL2Q8N8G2 317 aa22.16■■□□□ 1.14
TYMS-202ENST00000323250 ARHGAP45Q92619 1136 aa22.16■■□□□ 1.14
TYMS-202ENST00000323250 FAM84BQ96KN1 310 aaPredicted RBP22.16■■□□□ 1.14
TYMS-202ENST00000323250 MEIS3Q99687 375 aa22.16■■□□□ 1.14
TYMS-202ENST00000323250 TRPM7Q96QT4 1865 aa22.15■■□□□ 1.14
TYMS-202ENST00000323250 MROH5Q6ZUA9 1318 aa22.15■■□□□ 1.14
TYMS-202ENST00000323250 MYO3BQ8WXR4 1341 aa22.15■■□□□ 1.14
TYMS-202ENST00000323250 UBTFL1P0CB47 393 aaPredicted RBP22.15■■□□□ 1.14
TYMS-202ENST00000323250 INTS3Q68E01 1043 aaKnown RBP22.15■■□□□ 1.14
TYMS-202ENST00000323250 CAPNS2Q96L46 248 aa22.15■■□□□ 1.14
TYMS-202ENST00000323250 POLR2AP24928 1970 aaKnown RBP22.15■■□□□ 1.14
TYMS-202ENST00000323250 KIF16BQ96L93 1317 aa22.14■■□□□ 1.14
TYMS-202ENST00000323250 WNT10BO00744 389 aa22.14■■□□□ 1.13
TYMS-202ENST00000323250 TRIM27P14373 513 aa22.14■■□□□ 1.13
TYMS-202ENST00000323250 PTPN12Q05209 780 aaKnown RBP22.14■■□□□ 1.13
TYMS-202ENST00000323250 COL13A1Q5TAT6 717 aaPredicted RBP22.14■■□□□ 1.13
TYMS-202ENST00000323250 LRRFIP2Q9Y608 721 aaKnown RBP22.14■■□□□ 1.13
TYMS-202ENST00000323250 SASH1O94885 1247 aa22.13■■□□□ 1.13
TYMS-202ENST00000323250 GRM1Q13255 1194 aa22.13■■□□□ 1.13
TYMS-202ENST00000323250 METTL24Q5JXM2 366 aa22.13■■□□□ 1.13
TYMS-202ENST00000323250 PAXIP1Q6ZW49 1069 aaPredicted RBP22.13■■□□□ 1.13
TYMS-202ENST00000323250 SULF1Q8IWU6 871 aa22.13■■□□□ 1.13
TYMS-202ENST00000323250 OGFOD1Q8N543 542 aa22.13■■□□□ 1.13
TYMS-202ENST00000323250 TDRD7Q8NHU6 1098 aaKnown RBP22.13■■□□□ 1.13
TYMS-202ENST00000323250 PCDHAC2Q9Y5I4 1007 aa22.13■■□□□ 1.13
TYMS-202ENST00000323250 PDE8BO95263 885 aa22.12■■□□□ 1.13
TYMS-202ENST00000323250 ATG9AQ7Z3C6 839 aa22.12■■□□□ 1.13
TYMS-202ENST00000323250 FRAT1Q92837 279 aaPredicted RBP22.12■■□□□ 1.13
TYMS-202ENST00000323250 CDCA5Q96FF9 252 aa22.12■■□□□ 1.13
TYMS-202ENST00000323250 ZBED3Q96IU2 234 aaPredicted RBP22.12■■□□□ 1.13
TYMS-202ENST00000323250 EYA2O00167 538 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms