RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 SPA17Q15506 151 aa14.1□□□□□ -0.15
CACNA1F-201ENST00000323022 EVI5LQ96CN4 794 aa14.1□□□□□ -0.15
CACNA1F-201ENST00000323022 RBM27Q9P2N5 1060 aaKnown RBP14.1□□□□□ -0.15
CACNA1F-201ENST00000323022 KRT13P13646 458 aa14.1□□□□□ -0.15
CACNA1F-201ENST00000323022 UPF3BQ9BZI7 483 aaKnown RBP14.1□□□□□ -0.15
CACNA1F-201ENST00000323022 RPRD2Q5VT52 1461 aaKnown RBP14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 DPP9Q86TI2 863 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 AS3MTQ9HBK9 375 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 WDR33Q9C0J8 1336 aaKnown RBP14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 ARMC9Q7Z3E5 817 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 MBIPQ9NS73 344 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 RRP9O43818 475 aaKnown RBP14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 TRAK2O60296 914 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 TAF5LO75529 589 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 KCNQ4P56696 695 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 GOPCQ9HD26 462 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 INCENPQ9NQS7 918 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 TRAPPC8Q9Y2L5 1435 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 PARP10Q53GL7 1025 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 DENND2AQ9ULE3 1009 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 USP37Q86T82 979 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 FAM193BQ96PV7 902 aaPredicted RBP14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 CCDC113Q9H0I3 377 aa14.09□□□□□ -0.15
CACNA1F-201ENST00000323022 FAM13AO94988 1023 aa14.08□□□□□ -0.15
CACNA1F-201ENST00000323022 USH1GQ495M9 461 aa14.08□□□□□ -0.15
CACNA1F-201ENST00000323022 TNPO1Q92973 898 aaKnown RBP14.08□□□□□ -0.15
CACNA1F-201ENST00000323022 ECHDC1Q9NTX5 307 aa14.08□□□□□ -0.15
CACNA1F-201ENST00000323022 FMNL1O95466 1100 aaPredicted RBP14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 ABL1P00519 1130 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 HOXC9P31274 260 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 PABPC4Q13310 644 aaKnown RBP eCLIP14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 SSH1Q8WYL5 1049 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 CNKSR1Q969H4 720 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 KIFC2Q96AC6 838 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 ARHGEF10O15013 1369 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 GRM8O00222 908 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 STAMBPO95630 424 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 ITGA6P23229 1130 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 SCNN1DP51172 638 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 ARID5AQ03989 594 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 CWF19L2Q2TBE0 894 aaKnown RBP14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 KIAA0825Q8IV33 1275 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 ZBED2Q9BTP6 218 aa14.08□□□□□ -0.16
CACNA1F-201ENST00000323022 CCDC148Q8NFR7 591 aa14.07□□□□□ -0.16
CACNA1F-201ENST00000323022 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
CACNA1F-201ENST00000323022 RNMTO43148 476 aaKnown RBP14.07□□□□□ -0.16
CACNA1F-201ENST00000323022 PRPF4BQ13523 1007 aaKnown RBP14.07□□□□□ -0.16
CACNA1F-201ENST00000323022 EIF4A2Q14240 407 aaKnown RBP14.07□□□□□ -0.16
CACNA1F-201ENST00000323022 CFAP100Q494V2 611 aa14.07□□□□□ -0.16
CACNA1F-201ENST00000323022 IL15P40933 162 aaPredicted RBP14.07□□□□□ -0.16
CACNA1F-201ENST00000323022 MTHFSDQ2M296 383 aaKnown RBP14.07□□□□□ -0.16
CACNA1F-201ENST00000323022 SMC1AQ14683 1233 aaKnown RBP14.07□□□□□ -0.16
CACNA1F-201ENST00000323022 ACTN2P35609 894 aa14.07□□□□□ -0.16
CACNA1F-201ENST00000323022 SH3TC1Q8TE82 1336 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 ERFEQ4G0M1 354 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 CCDC129Q6ZRS4 1044 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 NLGN1Q8N2Q7 840 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 CNNM3Q8NE01 707 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 A1BGP04217 495 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 PARP1P09874 1014 aaKnown RBP14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 NBPF7P0C2Y1 421 aaPredicted RBP14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 Q3C1V9 767 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 TTC30AQ86WT1 665 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 MICAL1Q8TDZ2 1067 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 EXOC1Q9NV70 894 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 PA2G4Q9UQ80 394 aaKnown RBP14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 UIMC1Q96RL1 719 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 LRRC2Q9BYS8 371 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 TTF2Q9UNY4 1162 aaKnown RBP14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 NR1I2O75469 434 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 RTN1Q16799 776 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 KSR2Q6VAB6 950 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 METTL13Q8N6R0 699 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 TSNARE1Q96NA8 513 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 DCAF15Q66K64 600 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 DNAJC10Q8IXB1 793 aa14.06□□□□□ -0.16
CACNA1F-201ENST00000323022 GNAQP50148 359 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 UBE2Q2Q8WVN8 375 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 ALS2CR12Q96Q35 445 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 AATFQ9NY61 560 aaKnown RBP eCLIP14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 PTPRCP08575 1304 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 CCDC169A6NNP5 214 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 MAEAQ7L5Y9 396 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 IP6K1Q92551 441 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 ZNF335Q9H4Z2 1342 aaPredicted RBP14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 CPLX3Q8WVH0 158 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 SMTNL1A8MU46 457 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 CALML3P27482 149 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 NPATQ14207 1427 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 CLRN2A0PK11 232 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 TMCO5BA8MYB1 307 aa14.05□□□□□ -0.16
CACNA1F-201ENST00000323022 AFF2P51816 1311 aa14.04□□□□□ -0.16
CACNA1F-201ENST00000323022 KLF18A0A0U1RQI7 1052 aa14.04□□□□□ -0.16
CACNA1F-201ENST00000323022 C2orf69Q8N8R5 385 aa14.04□□□□□ -0.16
CACNA1F-201ENST00000323022 ZKSCAN3Q9BRR0 538 aa14.04□□□□□ -0.16
CACNA1F-201ENST00000323022 TMEM106CQ9BVX2 250 aa14.04□□□□□ -0.16
CACNA1F-201ENST00000323022 USP40Q9NVE5 1235 aa14.04□□□□□ -0.16
CACNA1F-201ENST00000323022 RNF181Q9P0P0 153 aa14.04□□□□□ -0.16
CACNA1F-201ENST00000323022 ORC3Q9UBD5 711 aaPredicted RBP14.04□□□□□ -0.16
CACNA1F-201ENST00000323022 SH3BP5O60239 455 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms