RNA–Protein interactions for RNA: ENST00000321892.8

BPTF-202, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BPTF, Length 11,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-202ENST00000321892 NEK11Q8NG66 645 aa17.17■□□□□ 0.34
BPTF-202ENST00000321892 LMOD1P29536 600 aaPredicted RBP17.17■□□□□ 0.34
BPTF-202ENST00000321892 RBM42Q9BTD8 480 aaKnown RBP17.17■□□□□ 0.34
BPTF-202ENST00000321892 CCDC26Q8TAB7 109 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 MYH6P13533 1939 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 ELF2Q15723 593 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 TRIM27P14373 513 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 GKAP1Q5VSY0 366 aaPredicted RBP17.16■□□□□ 0.34
BPTF-202ENST00000321892 IFT20Q8IY31 132 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 VCX3AQ9NNX9 186 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 IARSP41252 1262 aaKnown RBP17.16■□□□□ 0.34
BPTF-202ENST00000321892 TRPC3Q13507 836 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 KARSQ15046 597 aaKnown RBP17.16■□□□□ 0.34
BPTF-202ENST00000321892 SYT10Q6XYQ8 523 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 TSPYL2Q9H2G4 693 aaPredicted RBP17.16■□□□□ 0.34
BPTF-202ENST00000321892 MKNK2Q9HBH9 465 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 RAB3IPQ96QF0 476 aaPredicted RBP17.16■□□□□ 0.34
BPTF-202ENST00000321892 F13A1P00488 732 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 IFNKQ9P0W0 207 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 ZNF213O14771 459 aa17.16■□□□□ 0.34
BPTF-202ENST00000321892 TMOD2Q9NZR1 351 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 I3L4J1 428 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 EEF2P13639 858 aaKnown RBP17.15■□□□□ 0.34
BPTF-202ENST00000321892 RNF10Q8N5U6 811 aaKnown RBP17.15■□□□□ 0.34
BPTF-202ENST00000321892 ECHDC1Q9NTX5 307 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 SLC5A1P13866 664 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 GNAT3A8MTJ3 354 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 TTC36A6NLP5 189 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 SLC8A1P32418 973 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 MAP3K1Q13233 1512 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 PLCB1Q9NQ66 1216 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 HDAC9Q9UKV0 1011 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 ASIC1P78348 528 aa17.15■□□□□ 0.34
BPTF-202ENST00000321892 NCOA1Q15788 1441 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 PRAM1Q96QH2 718 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 CCDC122Q5T0U0 273 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 UTP11Q9Y3A2 253 aaKnown RBP17.14■□□□□ 0.33
BPTF-202ENST00000321892 CETN3O15182 167 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 SLC26A6Q9BXS9 759 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 AFMP43652 599 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 CALCOCO2Q13137 446 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 HDAC1Q13547 482 aaPredicted RBP17.14■□□□□ 0.33
BPTF-202ENST00000321892 TAOK1Q7L7X3 1001 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 BAG1Q99933 345 aaPredicted RBP17.14■□□□□ 0.33
BPTF-202ENST00000321892 CDK19Q9BWU1 502 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 RTEL1-TNFRSF6BF6WH68 1400 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 AKR1B15C9JRZ8 316 aaPredicted RBP17.14■□□□□ 0.33
BPTF-202ENST00000321892 SEL1L2Q5TEA6 688 aa17.14■□□□□ 0.33
BPTF-202ENST00000321892 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 SPATS2Q86XZ4 545 aaKnown RBP17.13■□□□□ 0.33
BPTF-202ENST00000321892 TXNDC16Q9P2K2 825 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 MTUS1Q9ULD2 1270 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 CROCCP2Q86T23 111 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 ARID5AQ03989 594 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 DDX27Q96GQ7 796 aaKnown RBP17.13■□□□□ 0.33
BPTF-202ENST00000321892 ZNF131P52739 623 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 ASXL1Q8IXJ9 1541 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 NCOA7Q8NI08 942 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 TRIM14Q14142 442 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 CLUL1Q15846 466 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 SMC5Q8IY18 1101 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 ARHGEF2Q92974 986 aaKnown RBP17.13■□□□□ 0.33
BPTF-202ENST00000321892 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 TMEM110-MUSTN1A8MSY1 372 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 RIOK3O14730 519 aaKnown RBP17.13■□□□□ 0.33
BPTF-202ENST00000321892 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 NPHP3Q7Z494 1330 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 OAS2P29728 719 aaKnown RBP17.13■□□□□ 0.33
BPTF-202ENST00000321892 RUFY4Q6ZNE9 571 aa17.13■□□□□ 0.33
BPTF-202ENST00000321892 PNMA8AQ86V59 439 aaPredicted RBP17.12■□□□□ 0.33
BPTF-202ENST00000321892 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.331e-7■□□□□ 11.3
BPTF-202ENST00000321892 BICD1Q96G01 975 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 TPX2Q9ULW0 747 aaKnown RBP17.12■□□□□ 0.33
BPTF-202ENST00000321892 HSPA1LP34931 641 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 HSP90AA4PQ58FG1 418 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 RAB11FIP4Q86YS3 637 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 KDM5AP29375 1690 aaKnown RBP17.12■□□□□ 0.33
BPTF-202ENST00000321892 DACT1Q9NYF0 836 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 ZSCAN26Q16670 478 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 SKAP1Q86WV1 359 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 IFIT1P09914 478 aaKnown RBP17.12■□□□□ 0.33
BPTF-202ENST00000321892 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 PPFIA2O75334 1257 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 WDHD1O75717 1129 aaPredicted RBP17.12■□□□□ 0.33
BPTF-202ENST00000321892 SLF2Q8IX21 1173 aa17.12■□□□□ 0.33
BPTF-202ENST00000321892 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
BPTF-202ENST00000321892 ZSCAN29Q8IWY8 852 aaPredicted RBP17.11■□□□□ 0.33
BPTF-202ENST00000321892 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
BPTF-202ENST00000321892 ACTN4O43707 911 aaKnown RBP17.11■□□□□ 0.33
BPTF-202ENST00000321892 DNM1Q05193 864 aaKnown RBP17.11■□□□□ 0.33
BPTF-202ENST00000321892 C8orf74Q6P047 294 aa17.11■□□□□ 0.33
BPTF-202ENST00000321892 ATP6V0A2Q9Y487 856 aa17.11■□□□□ 0.33
BPTF-202ENST00000321892 NUTM2AQ8IVF1 878 aaPredicted RBP17.11■□□□□ 0.33
BPTF-202ENST00000321892 MICAL1Q8TDZ2 1067 aa17.11■□□□□ 0.33
BPTF-202ENST00000321892 MIER3Q7Z3K6 550 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms