RNA–Protein interactions for RNA: ENST00000319432.9

CCDC93-201, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CCDC93, Length 6,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-201ENST00000319432 TCIRG1Q13488 830 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 H7C1D1 291 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 TIMM10P62072 90 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 KIF18AQ8NI77 898 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 RNF216Q9NWF9 866 aaPredicted RBP8.41□□□□□ -1.06
CCDC93-201ENST00000319432 MYO9BQ13459 2157 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 KIAA0825Q8IV33 1275 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 CCDC43Q96MW1 224 aaKnown RBP8.41□□□□□ -1.06
CCDC93-201ENST00000319432 GGA1Q9UJY5 639 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 MYOM2P54296 1465 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 ITGA6P23229 1130 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 CEP135Q66GS9 1140 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.41□□□□□ -1.062e-6■■■□□ 16.6
CCDC93-201ENST00000319432 CTR9Q6PD62 1173 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 AIDAQ96BJ3 306 aa8.41□□□□□ -1.06
CCDC93-201ENST00000319432 CLGNO14967 610 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 EPB41L2O43491 1005 aaKnown RBP8.4□□□□□ -1.06
CCDC93-201ENST00000319432 JAKMIP3Q5VZ66 844 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 MAP3K11Q16584 847 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 CCDC148Q8NFR7 591 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 TNNQ9UQP3 1299 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 SYNMO15061 1565 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 KRT85P78386 507 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 TSHZ3Q63HK5 1081 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 CCDC125Q86Z20 511 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 TBC1D2Q9BYX2 928 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 GTF2IP78347 998 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 CWC27Q6UX04 472 aaKnown RBP8.4□□□□□ -1.06
CCDC93-201ENST00000319432 BARGINQ6ZT62 677 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 TRIM35Q9UPQ4 493 aa8.4□□□□□ -1.06
CCDC93-201ENST00000319432 PTCH1Q13635 1447 aa8.4□□□□□ -1.07
CCDC93-201ENST00000319432 PPARDQ03181 441 aa8.4□□□□□ -1.07
CCDC93-201ENST00000319432 ARHGAP29Q52LW3 1261 aa8.4□□□□□ -1.07
CCDC93-201ENST00000319432 EIF2AK4Q9P2K8 1649 aaKnown RBP8.4□□□□□ -1.07
CCDC93-201ENST00000319432 MVPQ14764 893 aaKnown RBP8.4□□□□□ -1.07
CCDC93-201ENST00000319432 SLC27A3Q5K4L6 730 aa8.4□□□□□ -1.07
CCDC93-201ENST00000319432 DBNDD1Q9H9R9 158 aa8.4□□□□□ -1.07
CCDC93-201ENST00000319432 SSH2Q76I76 1423 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 ATP7BP35670 1465 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 XRCC6P12956 609 aaKnown RBP eCLIP8.39□□□□□ -1.07
CCDC93-201ENST00000319432 PDIA4P13667 645 aaKnown RBP8.39□□□□□ -1.07
CCDC93-201ENST00000319432 KIF4BQ2VIQ3 1234 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 ZSCAN23Q3MJ62 389 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 BRMS1Q9HCU9 246 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 GOLIM4O00461 696 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 CHD1LQ86WJ1 897 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 SYNE4Q8N205 404 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 CNKSR2Q8WXI2 1034 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 MKNK2Q9HBH9 465 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 CBFA2T2O43439 604 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 GUCY1B3Q02153 619 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 HLFQ16534 295 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 CEP57Q86XR8 500 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 CCDC83Q8IWF9 413 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 CDK5RAP3Q96JB5 506 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 DRC1Q96MC2 740 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 NACAP1Q9BZK3 213 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 CYP46A1Q9Y6A2 500 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 OVOS2A0A0G2JMS6 1433 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 OVOS2A0A0J9YW53 1432 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 OVOS2Q6IE36 1432 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 PDE8AO60658 829 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 MATR3P43243 847 aaKnown RBP eCLIP8.39□□□□□ -1.074e-6■■□□□ 12.5
CCDC93-201ENST00000319432 MAP3K12Q12852 859 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 NFIXQ14938 502 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 CCDC178Q5BJE1 867 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 KLHL10Q6JEL2 608 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 GIGYF2Q6Y7W6 1299 aaKnown RBP8.39□□□□□ -1.07
CCDC93-201ENST00000319432 KIF13AQ9H1H9 1805 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 SYCP1Q15431 976 aa8.39□□□□□ -1.07
CCDC93-201ENST00000319432 TTC31Q49AM3 519 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-201ENST00000319432 JAKMIP1Q96N16 626 aaKnown RBP8.39□□□□□ -1.07
CCDC93-201ENST00000319432 RRAGDQ9NQL2 400 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-201ENST00000319432 NKTRP30414 1462 aaKnown RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 KIF1BPQ96EK5 621 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 SCLT1Q96NL6 688 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 METTL22Q9BUU2 404 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 PDRG1Q9NUG6 133 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 NBPF7P0C2Y1 421 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 CASTP20810 708 aaKnown RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 CEP63Q96MT8 703 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 CCDC94Q9BW85 323 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 GPBP1L1Q9HC44 474 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 USP19O94966 1318 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 CPSF1Q10570 1443 aaKnown RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 LDHCP07864 332 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 CCDC183Q5T5S1 534 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 TMC6Q7Z403 805 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 ZNF804AQ7Z570 1209 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 RPAP2Q8IXW5 612 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 BIN2Q9UBW5 565 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 MYCP01106 439 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 KRT18P05783 430 aaKnown RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 TCP10Q12799 353 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 ITPK1Q13572 414 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 GPR101Q96P66 508 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 SEC31BQ9NQW1 1179 aa8.38□□□□□ -1.07
CCDC93-201ENST00000319432 ABT1Q9ULW3 272 aaKnown RBP8.38□□□□□ -1.07
CCDC93-201ENST00000319432 KRBA2Q6ZNG9 492 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms