RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 MXD3Q9BW11 206 aa17.3■□□□□ 0.36
SYCN-201ENST00000318438 GGA1Q9UJY5 639 aa17.3■□□□□ 0.36
SYCN-201ENST00000318438 WNT10BO00744 389 aa17.29■□□□□ 0.36
SYCN-201ENST00000318438 SASH1O94885 1247 aa17.29■□□□□ 0.36
SYCN-201ENST00000318438 SLC9C1Q4G0N8 1177 aa17.28■□□□□ 0.36
SYCN-201ENST00000318438 SLC10A4Q96EP9 437 aa17.28■□□□□ 0.36
SYCN-201ENST00000318438 CLMNQ96JQ2 1002 aa17.28■□□□□ 0.36
SYCN-201ENST00000318438 SP3Q02447 781 aa17.27■□□□□ 0.36
SYCN-201ENST00000318438 WNK4Q96J92 1243 aa17.27■□□□□ 0.36
SYCN-201ENST00000318438 SEC31BQ9NQW1 1179 aa17.27■□□□□ 0.36
SYCN-201ENST00000318438 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.36
SYCN-201ENST00000318438 PTCH2Q9Y6C5 1203 aa17.27■□□□□ 0.36
SYCN-201ENST00000318438 ZBTB48P10074 688 aaPredicted RBP17.26■□□□□ 0.35
SYCN-201ENST00000318438 PSME4Q14997 1843 aa17.26■□□□□ 0.35
SYCN-201ENST00000318438 ATP5J2-PTCD1G3V325 749 aa17.25■□□□□ 0.35
SYCN-201ENST00000318438 DDX10Q13206 875 aaKnown RBP17.25■□□□□ 0.35
SYCN-201ENST00000318438 NBPF11Q86T75 865 aa17.25■□□□□ 0.35
SYCN-201ENST00000318438 OGFOD1Q8N543 542 aa17.25■□□□□ 0.35
SYCN-201ENST00000318438 WTIPA6NIX2 430 aaPredicted RBP17.24■□□□□ 0.35
SYCN-201ENST00000318438 IRS4O14654 1257 aaPredicted RBP17.24■□□□□ 0.35
SYCN-201ENST00000318438 DACT2Q5SW24 774 aa17.24■□□□□ 0.35
SYCN-201ENST00000318438 PODNQ7Z5L7 613 aa17.24■□□□□ 0.35
SYCN-201ENST00000318438 DPF3Q92784 378 aa17.24■□□□□ 0.35
SYCN-201ENST00000318438 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
SYCN-201ENST00000318438 UNC80Q8N2C7 3258 aa17.24■□□□□ 0.35
SYCN-201ENST00000318438 GJA5P36382 358 aa17.23■□□□□ 0.35
SYCN-201ENST00000318438 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
SYCN-201ENST00000318438 RALBP1Q15311 655 aa17.23■□□□□ 0.35
SYCN-201ENST00000318438 APOBEC3FQ8IUX4 373 aaKnown RBP17.23■□□□□ 0.35
SYCN-201ENST00000318438 SH3TC2Q8TF17 1288 aa17.23■□□□□ 0.35
SYCN-201ENST00000318438 PTPN18Q99952 460 aa17.23■□□□□ 0.35
SYCN-201ENST00000318438 ISCA1Q9BUE6 129 aa17.23■□□□□ 0.35
SYCN-201ENST00000318438 PRO3102Q9H379 93 aa17.23■□□□□ 0.35
SYCN-201ENST00000318438 NFE2L2Q16236 605 aa17.22■□□□□ 0.35
SYCN-201ENST00000318438 OTUD7BQ6GQQ9 843 aa17.22■□□□□ 0.35
SYCN-201ENST00000318438 SSC5DA1L4H1 1573 aa17.22■□□□□ 0.35
SYCN-201ENST00000318438 SOX1O00570 391 aaPredicted RBP17.21■□□□□ 0.35
SYCN-201ENST00000318438 NEFMP07197 916 aa17.21■□□□□ 0.35
SYCN-201ENST00000318438 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
SYCN-201ENST00000318438 PLEKHF1Q96S99 279 aa17.21■□□□□ 0.35
SYCN-201ENST00000318438 XDHP47989 1333 aa17.21■□□□□ 0.34
SYCN-201ENST00000318438 PLBD2Q8NHP8 589 aa17.2■□□□□ 0.34
SYCN-201ENST00000318438 SHISA4Q96DD7 197 aa17.2■□□□□ 0.34
SYCN-201ENST00000318438 LRCH3Q96II8 777 aa17.2■□□□□ 0.34
SYCN-201ENST00000318438 DEFB129Q9H1M3 183 aa17.2■□□□□ 0.34
SYCN-201ENST00000318438 CCDC85AQ96PX6 553 aaPredicted RBP17.19■□□□□ 0.34
SYCN-201ENST00000318438 CHPF2Q9P2E5 772 aa17.19■□□□□ 0.34
SYCN-201ENST00000318438 PPP1R12BO60237 982 aaPredicted RBP17.18■□□□□ 0.34
SYCN-201ENST00000318438 ATP2B4P23634 1241 aa17.18■□□□□ 0.34
SYCN-201ENST00000318438 KIAA0825Q8IV33 1275 aa17.18■□□□□ 0.34
SYCN-201ENST00000318438 MYO3BQ8WXR4 1341 aa17.18■□□□□ 0.34
SYCN-201ENST00000318438 LAMB1P07942 1786 aa17.17■□□□□ 0.34
SYCN-201ENST00000318438 TESPA1A2RU30 521 aaPredicted RBP17.17■□□□□ 0.34
SYCN-201ENST00000318438 ARHGEF6Q15052 776 aa17.17■□□□□ 0.34
SYCN-201ENST00000318438 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
SYCN-201ENST00000318438 STRIP1Q5VSL9 837 aa17.17■□□□□ 0.34
SYCN-201ENST00000318438 ANKRD13DQ6ZTN6 518 aa17.17■□□□□ 0.34
SYCN-201ENST00000318438 ZBED3Q96IU2 234 aaPredicted RBP17.17■□□□□ 0.34
SYCN-201ENST00000318438 COL1A1P02452 1464 aaPredicted RBP17.17■□□□□ 0.34
SYCN-201ENST00000318438 ZNF646O15015 1829 aaPredicted RBP17.17■□□□□ 0.34
SYCN-201ENST00000318438 MED23Q9ULK4 1368 aa17.16■□□□□ 0.34
SYCN-201ENST00000318438 ARHGAP39Q9C0H5 1083 aa17.16■□□□□ 0.34
SYCN-201ENST00000318438 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
SYCN-201ENST00000318438 MTFR1Q15390 333 aa17.15■□□□□ 0.34
SYCN-201ENST00000318438 CCDC152Q4G0S7 254 aa17.15■□□□□ 0.34
SYCN-201ENST00000318438 TAF1CQ15572 869 aaPredicted RBP17.14■□□□□ 0.33
SYCN-201ENST00000318438 ANKRD18AQ8IVF6 992 aa17.14■□□□□ 0.33
SYCN-201ENST00000318438 ZBTB38Q8NAP3 1195 aaPredicted RBP17.14■□□□□ 0.33
SYCN-201ENST00000318438 UNCXA6NJT0 531 aa17.13■□□□□ 0.33
SYCN-201ENST00000318438 USP2O75604 605 aaPredicted RBP17.13■□□□□ 0.33
SYCN-201ENST00000318438 IREB2P48200 963 aaKnown RBP17.13■□□□□ 0.33
SYCN-201ENST00000318438 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
SYCN-201ENST00000318438 NBPF12Q5TAG4 269 aaPredicted RBP17.13■□□□□ 0.33
SYCN-201ENST00000318438 TXNRD3Q86VQ6 643 aa17.13■□□□□ 0.33
SYCN-201ENST00000318438 BRI3BPQ8WY22 251 aa17.13■□□□□ 0.33
SYCN-201ENST00000318438 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
SYCN-201ENST00000318438 OPTNQ96CV9 577 aa17.13■□□□□ 0.33
SYCN-201ENST00000318438 MS4A4AQ96JQ5 239 aa17.13■□□□□ 0.33
SYCN-201ENST00000318438 ELP3Q9H9T3 547 aa17.13■□□□□ 0.33
SYCN-201ENST00000318438 ZFYVE28Q9HCC9 887 aa17.13■□□□□ 0.33
SYCN-201ENST00000318438 PCDHAC2Q9Y5I4 1007 aa17.13■□□□□ 0.33
SYCN-201ENST00000318438 ZBTB7BO15156 539 aaPredicted RBP17.12■□□□□ 0.33
SYCN-201ENST00000318438 ECM2O94769 699 aaPredicted RBP17.12■□□□□ 0.33
SYCN-201ENST00000318438 TTLL5Q6EMB2 1281 aa17.12■□□□□ 0.33
SYCN-201ENST00000318438 UBE2Q1Q7Z7E8 422 aa17.12■□□□□ 0.33
SYCN-201ENST00000318438 ANKRD13AQ8IZ07 590 aa17.12■□□□□ 0.33
SYCN-201ENST00000318438 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
SYCN-201ENST00000318438 HTATIP2Q9BUP3 242 aa17.12■□□□□ 0.33
SYCN-201ENST00000318438 COA1Q9GZY4 146 aa17.12■□□□□ 0.33
SYCN-201ENST00000318438 PNNQ9H307 717 aaKnown RBP17.12■□□□□ 0.33
SYCN-201ENST00000318438 NR2E3Q9Y5X4 410 aa17.12■□□□□ 0.33
SYCN-201ENST00000318438 VCANP13611 3396 aa17.12■□□□□ 0.33
SYCN-201ENST00000318438 ZSWIM8A7E2V4 1837 aa17.12■□□□□ 0.33
SYCN-201ENST00000318438 CLRN2A0PK11 232 aa17.11■□□□□ 0.33
SYCN-201ENST00000318438 MMP14P50281 582 aa17.11■□□□□ 0.33
SYCN-201ENST00000318438 DLGAP5Q15398 846 aa17.11■□□□□ 0.33
SYCN-201ENST00000318438 SUPT20HL1Q3ZLR7 823 aa17.11■□□□□ 0.33
SYCN-201ENST00000318438 FAM43AQ8N2R8 423 aa17.11■□□□□ 0.33
SYCN-201ENST00000318438 COL25A1Q9BXS0 654 aaPredicted RBP17.11■□□□□ 0.33
SYCN-201ENST00000318438 PPP2R3BQ9Y5P8 575 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms