RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 DDX58O95786 925 aaKnown RBP11.15□□□□□ -0.62
CAPN3-201ENST00000318023 GYS2P54840 703 aa11.15□□□□□ -0.62
CAPN3-201ENST00000318023 KIAA1524Q8TCG1 905 aa11.15□□□□□ -0.62
CAPN3-201ENST00000318023 BRIP1Q9BX63 1249 aa11.15□□□□□ -0.62
CAPN3-201ENST00000318023 MMP14P50281 582 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 PRPF40BQ6NWY9 871 aaKnown RBP11.14□□□□□ -0.63
CAPN3-201ENST00000318023 TBC1D9Q6ZT07 1266 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 ADAMTS7Q9UKP4 1686 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 PDE6BP35913 854 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 ITPRIPQ8IWB1 547 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 NLRP3Q96P20 1036 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 TSPYL1Q9H0U9 437 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 GDPD2Q9HCC8 539 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 GEMIN8Q9NWZ8 242 aaKnown RBP11.14□□□□□ -0.63
CAPN3-201ENST00000318023 ERVV-1B6SEH8 477 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 TGFB2P61812 414 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 NEXNQ0ZGT2 675 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-201ENST00000318023 ZNF34Q8IZ26 560 aa11.14□□□□□ -0.63
CAPN3-201ENST00000318023 PXDNLA1KZ92 1463 aa11.13□□□□□ -0.63
CAPN3-201ENST00000318023 IRS4O14654 1257 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-201ENST00000318023 NTSR2O95665 410 aa11.13□□□□□ -0.63
CAPN3-201ENST00000318023 GPR101Q96P66 508 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-201ENST00000318023 TOMM22Q9NS69 142 aa11.13□□□□□ -0.63
CAPN3-201ENST00000318023 RNF181Q9P0P0 153 aa11.13□□□□□ -0.63
CAPN3-201ENST00000318023 COL5A3P25940 1745 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-201ENST00000318023 SRGNP10124 158 aa11.13□□□□□ -0.63
CAPN3-201ENST00000318023 GTF2A1P52655 376 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-201ENST00000318023 SEC31BQ9NQW1 1179 aa11.13□□□□□ -0.63
CAPN3-201ENST00000318023 SIPA1L3O60292 1781 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-201ENST00000318023 SH3TC1Q8TE82 1336 aa11.13□□□□□ -0.63
CAPN3-201ENST00000318023 KSR2Q6VAB6 950 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 ZNF277Q9NRM2 450 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-201ENST00000318023 IL16Q14005 1332 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 IGKV5-2P06315 115 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 HOXB7P09629 217 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 KMT5BQ4FZB7 885 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 DNAAF4Q8WXU2 420 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 C4AP0C0L4 1744 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 TRIM66O15016 1216 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 C9orf131Q5VYM1 1079 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 NYXQ9GZU5 481 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 YY1AP1Q9H869 796 aa11.12□□□□□ -0.63
CAPN3-201ENST00000318023 UBR2Q8IWV8 1755 aa11.11□□□□□ -0.63
CAPN3-201ENST00000318023 GRIN3BO60391 1043 aa11.11□□□□□ -0.63
CAPN3-201ENST00000318023 MBD3O95983 291 aa11.11□□□□□ -0.63
CAPN3-201ENST00000318023 C10orf67Q8IYJ2 551 aa11.11□□□□□ -0.63
CAPN3-201ENST00000318023 DZIP1LQ8IYY4 767 aaKnown RBP11.11□□□□□ -0.63
CAPN3-201ENST00000318023 CWC25Q9NXE8 425 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-201ENST00000318023 NOB1Q9ULX3 412 aaKnown RBP11.11□□□□□ -0.63
CAPN3-201ENST00000318023 HSP90AB3PQ58FF7 597 aa11.11□□□□□ -0.63
CAPN3-201ENST00000318023 NEK11Q8NG66 645 aa11.11□□□□□ -0.63
CAPN3-201ENST00000318023 MASTLQ96GX5 879 aa11.11□□□□□ -0.63
CAPN3-201ENST00000318023 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-201ENST00000318023 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
CAPN3-201ENST00000318023 C9orf78Q9NZ63 289 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-201ENST00000318023 CLGNO14967 610 aa11.1□□□□□ -0.63
CAPN3-201ENST00000318023 DHX16O60231 1041 aaKnown RBP11.1□□□□□ -0.63
CAPN3-201ENST00000318023 ZNF592Q92610 1267 aa11.1□□□□□ -0.63
CAPN3-201ENST00000318023 GTF3C6Q969F1 213 aa11.1□□□□□ -0.63
CAPN3-201ENST00000318023 C10orf71Q711Q0 1435 aa11.1□□□□□ -0.63
CAPN3-201ENST00000318023 GADD45BO75293 160 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-201ENST00000318023 NOP2P46087 812 aaKnown RBP11.1□□□□□ -0.63
CAPN3-201ENST00000318023 PARP10Q53GL7 1025 aa11.1□□□□□ -0.63
CAPN3-201ENST00000318023 GPATCH11Q8N954 259 aa11.1□□□□□ -0.63
CAPN3-201ENST00000318023 CELF1Q92879 486 aaKnown RBP11.1□□□□□ -0.63
CAPN3-201ENST00000318023 ADCY9O60503 1353 aa11.1□□□□□ -0.63
CAPN3-201ENST00000318023 WTIPA6NIX2 430 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-201ENST00000318023 HDAC1Q13547 482 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-201ENST00000318023 NOL10Q9BSC4 688 aaKnown RBP11.1□□□□□ -0.63
CAPN3-201ENST00000318023 RASSF4Q9H2L5 321 aa11.1□□□□□ -0.63
CAPN3-201ENST00000318023 RIMBP2O15034 1052 aa11.09□□□□□ -0.63
CAPN3-201ENST00000318023 SMARCA5O60264 1052 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-201ENST00000318023 CYP2C19P33261 490 aa11.09□□□□□ -0.63
CAPN3-201ENST00000318023 DDX46Q7L014 1031 aaKnown RBP11.09□□□□□ -0.63
CAPN3-201ENST00000318023 KDM3BQ7LBC6 1761 aa11.09□□□□□ -0.63
CAPN3-201ENST00000318023 N4BP2Q86UW6 1770 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-201ENST00000318023 PATL2C9JE40 543 aaKnown RBP11.09□□□□□ -0.63
CAPN3-201ENST00000318023 SNAP23O00161 211 aa11.09□□□□□ -0.63
CAPN3-201ENST00000318023 ZKSCAN2Q63HK3 967 aa11.09□□□□□ -0.63
CAPN3-201ENST00000318023 ZNF784Q8NCA9 323 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-201ENST00000318023 ISCA1Q9BUE6 129 aa11.09□□□□□ -0.63
CAPN3-201ENST00000318023 LRP5O75197 1615 aa11.08□□□□□ -0.63
CAPN3-201ENST00000318023 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 AP5Z1O43299 807 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 NUCB1Q02818 461 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 BMP2KLQ5H9B9 411 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 CHD1LQ86WJ1 897 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 CCDC112Q8NEF3 446 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 CNKSR1Q969H4 720 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 NPR1P16066 1061 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 ANKRD45Q5TZF3 282 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 FBXO38Q6PIJ6 1188 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 SYT10Q6XYQ8 523 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
CAPN3-201ENST00000318023 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-201ENST00000318023 TNNT1P13805 278 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 PTGS1P23219 599 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 PRELPP51888 382 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms